Evaluating the Utility of the Female-Specific Mitochondrial F-Orf
Evaluating the utility of the female- specific mitochondrial f-orf gene for population genetic, phylogeographic and systematic studies in freshwater mussels (Bivalvia: Unionida) Brent M. Robicheau1,5,*, Emily E. Chase1,*, Walter R. Hoeh2, John L. Harris3, Donald T. Stewart1 and Sophie Breton4 1 Department of Biology, Acadia University, Wolfville, Canada 2 Department of Biological Sciences, Kent State University, Kent, United States of America 3 Department of Biological Sciences, Arkansas State University, Jonesboro, United States of America 4 Department of Biological Sciences, University of Montreal, Montreal, Canada 5 Current affiliation: Department of Biology, Life Science Centre, Dalhousie University, Halifax, Canada * These authors contributed equally to this work. ABSTRACT Freshwater mussels (order: Unionida) represent one of the most critically imperilled groups of animals; consequently, there exists a need to establish a variety of molecular markers for population genetics and systematic studies in this group. Recently, two novel mitochondrial protein-coding genes were described in unionoids with doubly uniparental inheritance of mtDNA. These genes are the f-orf in female-transmitted mtDNA and the m-orf in male-transmitted mtDNA. In this study, whole F-type mitochondrial genome sequences of two morphologically similar Lampsilis spp. were compared to identify the most divergent protein-coding regions, including the f-orf gene, and evaluate its utility for population genetic and phylogeographic studies in the subfamily Ambleminae. We also tested whether the f-orf gene is phylogenetically informative at the species level. Our preliminary results indicated that the f-orf gene Submitted 17 February 2018 Accepted 29 May 2018 could represent a viable molecular marker for population- and species-level studies in Published 13 June 2018 freshwater mussels.
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