A 20-Year Bibliometric Analysis Based on Pubmed
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How Comprehensive Is the Pubmed Central Open Access Full-Text Database? ⋆
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by Illinois Digital Environment for Access to Learning and Scholarship Repository How comprehensive is the PubMed Central Open Access full-text database? ⋆ Jiangen He1[0000−0002−3950−6098] and Kai Li1[0000−0002−7264−365X] Department of Information Science, Drexel University, Philadelphia PA, 19104, USA. [email protected], [email protected] Abstract. The comprehensiveness of database is a prerequisite for the quality of scientific works established on this increasingly significant infrastructure. This is especially so for large-scale text-mining analy- ses of scientific publications facilitated by open-access full-text scientific databases. Given the lack of research concerning the comprehensiveness of this type of academic resource, we conducted a project to analyze the coverage of materials in the PubMed Central Open Access Subset (PMCOAS), a popular source for open-access scientific publications, in terms of the PubMed database. The preliminary results show that the PMCOAS coverage is in a rapid increase in recent years, despite the vast difference by MeSH descriptor. Keywords: Database coverage · PubMed Central Open Access· PubMed. 1 Introduction Database has become a central piece of scientific infrastructure in our contem- porary data-driven mode of scientific practice. The increasing volumes of data stored in structured formats gradually became an indispensable source for scien- tific discoveries in nearly every knowledge domain. However, one question that often shrouds this source is how comprehensive the database is as compared to the reality the database is claimed to represent. A large number of studies in the field of quantitative studies of science have been devoted to this question since the end of the 20th century: they have compared various parameters, especially the number of documents, references, and journals covered, among databases such as Web of Science, Scopus, and Google Scholar [2, 3, 5, 8, 6, 7]. -
A Scientometric Study of Pubmed-Indexed Endodontic Articles: a Comparison Between Iran and Other Regional Countries
EDITORIAL 1 2 3 Mohammad Jafar Eghbal DDS, MS, Negar Davari Ardakani MSc, PhD, Saeed Asgary DDS, MS A Scientometric Study of PubMed-Indexed Endodontic Articles: A Comparison between Iran and Other Regional Countries 1. Dental Research Center, Iranian Center for Endodontic Research, Dental School, Shahid Beheshti University of Medical Sciences, Tehran, Iran 2. Linguistics Department, Literature Faculty, Shahid Beheshti University of Medical Sciences, Tehran, Iran 3. Iranian Center for Endodontic Research, Dental Research Center, Dental School, Shahid Beheshti University of Medical Sciences, Tehran, Iran Introduction: Based on Iran’s 20-year prospective national vision document, Iran may be seen as the most developed country in science and technology in the region by 2025. In this report, bibliometric indicators are used to compare the research productivity in endodontics between Iran and 28 selected Asian countries. Materials and Methods: Medical Subject Headings keyword-searching of PubMed up to 2012 was conducted to compare the scientific publications in Iran and neighboring countries (Middle East, Middle Asia, Caucasus and EMRO countries). Highest 5 PubMed-indexed endodontic journals were also searched to retrieve the number of published articles of the top five countries. Data were extracted, tabulated and compared to identify the ranks as well as trends. Results: The results confirm that there are many differences in scientific endodontic publications between the studied countries; Iran ranked second in endodontic research productivity compared to Turkey in 2011. However, Iran attained first place in 2010 as well as the most positive publication trend in PubMed-indexed endodontic journals. Conclusion: Although Iran was in second rank in the region last year, the positive trend in published endodontic research papers is considered a sign of future success in acquiring Iran’s vision. -
Google Scholar, Sci-Hub and Libgen: Could They Be Our New Partners?
Purdue University Purdue e-Pubs Proceedings of the IATUL Conferences 2017 IATUL Proceedings Google Scholar, Sci-Hub and LibGen: Could they be our New Partners? Louis Houle McGill University, [email protected] Louis Houle, "Google Scholar, Sci-Hub and LibGen: Could they be our New Partners?." Proceedings of the IATUL Conferences. Paper 3. https://docs.lib.purdue.edu/iatul/2017/partnership/3 This document has been made available through Purdue e-Pubs, a service of the Purdue University Libraries. Please contact [email protected] for additional information. GOOGLE SCHOLAR, SCI-HUB AND LIBGEN: COULD THEY BE OUR NEW PARTNERS? Louis Houle McGill University Canada [email protected] Abstract Since its debut I November 2004, librarians have raised several criticisms at Google Scholar (GS) such as its inconsistency of coverage and its currency and scope of coverage. It may have been true in the early years of Google Scholar but is this still through twelve years after? Is this sufficient to ignore it totally either in our information literacy programs or evaluate its value against the values of subscription-based abstracts and indexes? In this era of severe budget constraints that libraries are facing, can we imagine of substituting most or all of our subject databases with the free access of Google Scholar for discoverability? How much overlap between our databases and Google Scholar? How reliable is Google Scholar? How stable is its content over time? Open Access is getting to be the predominant form of getting access to peer reviewed articles. Many new non-traditional tools (institutional repositories, social media and peer to peer sites) are available out there to retrieve the full-text of peer reviewed articles. -
Global Scientific Research on Coronavirus : a Scientometric Study
University of Nebraska - Lincoln DigitalCommons@University of Nebraska - Lincoln Library Philosophy and Practice (e-journal) Libraries at University of Nebraska-Lincoln September 2020 Global Scientific Research on Coronavirus : a Scientometric Study Pooja P. Dadhe [email protected] Manju N. Dubey [email protected] Follow this and additional works at: https://digitalcommons.unl.edu/libphilprac Dadhe, Pooja P. and Dubey, Manju N., "Global Scientific Research on Coronavirus : a Scientometric Study" (2020). Library Philosophy and Practice (e-journal). 4277. https://digitalcommons.unl.edu/libphilprac/4277 Global Scientific Research on Coronavirus : a Scientometric Study Dr. Pooja P. Dadhe Assistant Librarian Dr. V.B. Alias Bhausaheb Kolte Knowledge Resource Centre R.T.M. Nagpur University, Nagpur, India [email protected] Dr. Manju N. Dubey Librarian R.S Mundle Dharampeth Arts and Commerce College, Nagpur, India [email protected] Abstract To understand the global research trend of the scientific publication on coronavirus, this scientometric study was carried out for the period 2002 to 2019 based on scientometric indicators such as growth of publication, productive authors and institutions, collaboration among authors and institutions, the hotspot of research area and the citation pattern. A total of 8541 records downloaded from PubMed formed the dataset for the study and were analysed using Bibexcel and VOSviewer. The findings reveal that the research on coronavirus was noticeable but it was not significant. A correlation between the number of publications and emergence of SARS in 2002 and MERS in 2012 was also visible. The trend of publication was found to be fluctuating during the period of study. The findings demonstrate that collaboration among institutions was not very strong. -
Journals from BMJ
Journals from BMJ journals.bmj.com BMJ started out over 170 years ago as Providing high quality content for health professionals and a medical journal, publishing our first researchers across the world. Our journals include not only the BMJ, research paper. but some of the most influential speciality journals in their field. Now, as a global brand with a worldwide audience, we help medical organisations and clinicians tackle today’s most critical • In the last 12 months, over 50 million unique users accessed healthcare challenges. our subscription journals online, generating over 107 million page views. What is an Our vision is to create ‘a healthier world’. • Nearly 80% of our titles saw Impact Factor rises in 2014. Impact Factor? BMJ’s journals division now publishes more than 50 of the • 21% of our users view journal content from mobile devices. An Impact Factor (IF) is a measure of world’s leading medical and allied science journals. In doing so, the frequency with which the average we have pioneered the migration to digital publishing and the article in a journal has been cited in development of open access. a particular year. The annual Journal For more information or to of Citation Reports impact factor is a ratio between citations and recent Today, our expertise extends to medical education, clinical arrange a trial, please contact: citable items published. Thus, the decision support, data analytics and quality improvement to BMJ Consortia sales impact factor of a journal is calculated enhance day to day decision-making and healthcare delivery. by dividing the number of current E: [email protected] year citations to the source items T: +44 (0) 20 7383 6438 published in that journal during the “At BMJ we believe the work we do previous two years. -
Original Articletrends in Global Acupuncture Publications: An
+ MODEL Available online at www.sciencedirect.com ScienceDirect Journal of the Chinese Medical Association xx (2017) 1e5 www.jcma-online.com Original Article Trends in global acupuncture publications: An analysis of the Web of Science database from 1988 to 2015 Yen-Ying Kung a,b, Shinn-Jang Hwang c, Tsai-Feng Li a, Seong-Gyu Ko d,e, Ching-Wen Huang f, Fang-Pey Chen a,b,* a Center for Traditional Medicine, Taipei Veterans General Hospital, Taipei, Taiwan, ROC b Institute of Traditional Medicine, School of Medicine, National Yang-Ming University, Taipei, Taiwan, ROC c Department of Family Medicine, Faculty of Medicine, School of Medicine, National Yang-Ming University, Taipei, Taiwan, ROC d Department of Preventive Medicine, College of Korean Medicine, Kyung Hee University, Seoul, Republic of Korea e Center for Clinical Research and Drug Department, College of Korean Medicine, Kyung Hee University, Seoul, Republic of Korea f Department of Science in Korean Medicine, Graduate School, Kyung Hee University, Seoul, Republic of Korea Received March 28, 2016; accepted December 31, 2016 Abstract Background: Acupuncture is a rapidly growing medical specialty worldwide. This study aimed to analyze the acupuncture publications from 1988 to 2015 by using the Web of Science (WoS) database. Familiarity with the trend of acupuncture publications will facilitate a better un- derstanding of existing academic research in acupuncture and its applications. Methods: Academic articles published focusing on acupuncture were retrieved and analyzed from the WoS database which included articles published in Science Citation Index-Expanded and Social Science Citation Indexed journals from 1988 to 2015. Results: A total of 7450 articles were published in the field of acupuncture during the period of 1988e2015. -
Social Media and Research Publication Activity During Early Stages of the COVID-19 Pandemic: Longitudinal Trend Analysis
JOURNAL OF MEDICAL INTERNET RESEARCH Taneja et al Original Paper Social Media and Research Publication Activity During Early Stages of the COVID-19 Pandemic: Longitudinal Trend Analysis Sonia L Taneja1*, MD; Monica Passi1*, MD; Sumona Bhattacharya1, MD; Samuel A Schueler1, MD; Sandeep Gurram2, MD; Christopher Koh3, MHSc, MD 1National Institutes of Diabetes and Digestive and Kidney Diseases, Digestive Disease Branch, Bethesda, MD, United States 2Urologic Oncology Branch, National Cancer Institute, National Institutes of Health, Bethesda, MD, United States 3Liver Diseases Branch, National Institutes of Diabetes and Digestive and Kidney Diseases, Bethesda, MD, United States *these authors contributed equally Corresponding Author: Christopher Koh, MHSc, MD Liver Diseases Branch, National Institutes of Diabetes and Digestive and Kidney Diseases 10 Center Drive Clinical Research Center, 5-2740 Bethesda, MD, 20892 United States Phone: 1 301 443 9402 Email: [email protected] Abstract Background: The COVID-19 pandemic has highlighted the importance of rapid dissemination of scientific and medical discoveries. Current platforms available for the distribution of scientific and clinical research data and information include preprint repositories and traditional peer-reviewed journals. In recent times, social media has emerged as a helpful platform to share scientific and medical discoveries. Objective: This study aimed to comparatively analyze activity on social media (specifically, Twitter) and that related to publications in the form of preprint and peer-reviewed journal articles in the context of COVID-19 and gastroenterology during the early stages of the COVID-19 pandemic. Methods: COVID-19±related data from Twitter (tweets and user data) and articles published in preprint servers (bioRxiv and medRxiv) as well as in the PubMed database were collected and analyzed during the first 6 months of the pandemic, from December 2019 through May 2020. -
Overview of the Altmetrics Landscape
Purdue University Purdue e-Pubs Charleston Library Conference Overview of the Altmetrics Landscape Richard Cave Public Library of Science, [email protected] Follow this and additional works at: https://docs.lib.purdue.edu/charleston Part of the Library and Information Science Commons An indexed, print copy of the Proceedings is also available for purchase at: http://www.thepress.purdue.edu/series/charleston. You may also be interested in the new series, Charleston Insights in Library, Archival, and Information Sciences. Find out more at: http://www.thepress.purdue.edu/series/charleston-insights-library-archival- and-information-sciences. Richard Cave, "Overview of the Altmetrics Landscape" (2012). Proceedings of the Charleston Library Conference. http://dx.doi.org/10.5703/1288284315124 This document has been made available through Purdue e-Pubs, a service of the Purdue University Libraries. Please contact [email protected] for additional information. Overview of the Altmetrics Landscape Richard Cave, Director of IT and Computer Operations, Public Library of Science Abstract While the impact of article citations has been examined for decades, the “altmetrics” movement has exploded in the past year. Altmetrics tracks the activity on the Social Web and looks at research outputs besides research articles. Publishers of scientific research have enabled altmetrics on their articles, open source applications are available for platforms to display altmetrics on scientific research, and subscription models have been created that provide altmetrics. In the future, altmetrics will be used to help identify the broader impact of research and to quickly identify high-impact research. Altmetrics and Article-Level Metrics Washington as an academic research project to rank journals based on a vast network of citations The term “altmetrics” was coined by Jason Priem, (Eigenfactor.org, http://www.eigenfactor.org/ a PhD candidate at the School of Information and whyeigenfactor.php). -
Impact on Citations and Altmetrics Peter E. Clayson*1, Scott
1 The Open Access Advantage for Studies of Human Electrophysiology: Impact on Citations and Altmetrics Peter E. Clayson*1, Scott A. Baldwin2, and Michael J. Larson2,3 1Department of Psychology, University of South Florida, Tampa, FL 2Department of Psychology, Brigham Young University, Provo, UT 3Neuroscience Center, Brigham Young University, Provo, UT *Corresponding author at: Department of Psychology, University of South Florida, 4202 East Fowler Avenue, Tampa, FL, US, 33620-7200. Email: [email protected] 2 Disclosure Michael J. Larson, PhD, is the Editor-in-Chief of the International Journal of Psychophysiology. Editing of the manuscript was handled by a separate editor and Dr. Larson was blinded from viewing the reviews or comments as well as the identities of the reviewers. 3 Abstract Barriers to accessing scientific findings contribute to knowledge inequalities based on financial resources and decrease the transparency and rigor of scientific research. Recent initiatives aim to improve access to research as well as methodological rigor via transparency and openness. We sought to determine the impact of such initiatives on open access publishing in the sub-area of human electrophysiology and the impact of open access on the attention articles received in the scholarly literature and other outlets. Data for 35,144 articles across 967 journals from the last 20 years were examined. Approximately 35% of articles were open access, and the rate of publication of open-access articles increased over time. Open access articles showed 9 to 21% more PubMed and CrossRef citations and 39% more Altmetric mentions than closed access articles. Green open access articles (i.e., author archived) did not differ from non-green open access articles (i.e., publisher archived) with respect to citations and were related to higher Altmetric mentions. -
Acupuncture Approaches to Decrease Disparities in Outcomes of Pain Treatment Two Arm Comparative Effectiveness Trial (AADDOPT-2)
McKee, M. Diane; Kligler, Benjamin E. Acupuncture Approaches to Decrease Disparities in Outcomes of Pain Treatment Two Arm Comparative Effectiveness Trial (AADDOPT-2) Study Protocol M. Diane McKee, MD, MS 1 Benjamin Kligler, MD, MPH 1,2 Belinda Anderson, PhD 1,3 Elizabeth Chuang, MD, MPH 1 Mariel Connolly, BA 1 Qi Gao, PhD 1 Eric N Gil, BA 1 Claudia Lechuga, MS 1 Mimi Kim, PhD 1 Arya Nielsen, PhD 4 1. Albert Einstein College of Medicine, Department of Family and Social Medicine 2. National Director, Integrative Health Coordinating Center, U.S. Veterans Health Administration 3. Pacific College of Oriental Medicine 4. Icahn School of Medicine at Mount Sinai, Department of Family Medicine and Community Health PCORI award AD-1402-10857 Clinicaltrials.gov # NCT02456727 Updated 7/25/2017 1 PCORI Research Plan Template McKee, M. Diane; Kligler, Benjamin E. RESEARCH STRATEGY Part A. Background Impact of the condition on the health of individuals and populations. (Criterion 1) A.1. Prevalence and Impact of Chronic Pain and Disparities in Health Outcomes. Chronic pain is pain that has outlasted the healing of an acute injury by one month, continues or recurs frequently for three months, or is associated with a lesion that is not expected to resolve(1). Chronic pain disrupts the lives of millions of people worldwide. Minority populations in particular experience greater prevalence of chronic pain and worse outcomes. Estimates of the prevalence of chronic pain in the general U.S. population range from 10-40% in recent large surveys (2-7). Patients often do not bring such pain to the attention of physicians (8). -
The Most Widely Disseminated COVID-19-Related Scientific Publications
healthcare Article The Most Widely Disseminated COVID-19-Related Scientific Publications in Online Media: A Bibliometric Analysis of the Top 100 Articles with the Highest Altmetric Attention Scores Ji Yoon Moon, Dae Young Yoon * , Ji Hyun Hong , Kyoung Ja Lim, Sora Baek, Young Lan Seo and Eun Joo Yun Department of Radiology, Kangdong Sacred Heart Hospital, College of Medicine, Hallym University, 150, Seongan-ro, Gangdong-gu, Seoul 134-701, Korea; [email protected] (J.Y.M.); [email protected] (J.H.H.); [email protected] (K.J.L.); [email protected] (S.B.); [email protected] (Y.L.S.); [email protected] (E.J.Y.) * Correspondence: [email protected] Abstract: The novel coronavirus disease 2019 (COVID-19) is a global pandemic. This study’s aim was to identify and characterize the top 100 COVID-19-related scientific publications, which had received the highest Altmetric Attention Scores (AASs). Hence, we searched Altmetric Explorer using search terms such as “COVID” or “COVID-19” or “Coronavirus” or “SARS-CoV-2” or “nCoV” and then selected the top 100 articles with the highest AASs. For each article identified, we extracted the following information: the overall AAS, publishing journal, journal impact factor (IF), date of publication, language, country of origin, document type, main topic, and accessibility. The top 100 articles most frequently were published in journals with high (>10.0) IF (n = 67), were published Citation: Moon, J.Y.; Yoon, D.Y.; between March and July 2020 (n = 67), were written in English (n = 100), originated in the United Hong, J.H.; Lim, K.J.; Baek, S.; Seo, States (n = 45), were original articles (n = 59), dealt with treatment and clinical manifestations Y.L.; Yun, E.J. -
Open Science, Public Accountability: NLM Helps Nurse Scholars Shape Public Discourse
Open Science, Public Accountability: NLM helps Nurse Scholars shape Public Discourse The Jennifer K. Hayden Keynote Address NCSBN Scientific Symposium March 22, 2021 Patricia Flatley Brennan, RN, PhD Director, National Library of Medicine Objectives • Recognize the role of the National Library of Medicine in supporting the scientific response to health challenges. • Critically appraise the contribution of the NLM’s offerings of bibliographic and full text literature databases, biomedical databanks and repositories such as clinicaltrials.gov in support nursing science • Devise pathways for public discourse that enhance the impact of one’s science What does the NLM Do? • Facilitate Open access to the literature and data o PubMed Central – full text literature repository o CORD-19 – over 121,000 COVID-related articles available for machine processing o PubMed – bibliographic citation database, over 31M citations • Conduct and support research o Computational biology and computational health sciences • Establish and implement training o Pre- & post-doctoral programs, clinicians, librarian and the general public • Inform Policy o Open data, research integrity, information access, research accountability & reporting Facilitate open access to literature and data The 21st Century Collection NLM Preserve Connect Discover 011010101011010 101010101010001 Literature 110110011001100 Data 101010101110010 101010101010001 PubMed is search engine that accesses the MEDLINE database of references, citations related to articles in PubMed Central , and some