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Anchialine Cave Biology in the Era of Speleogenomics Jorge L
International Journal of Speleology 45 (2) 149-170 Tampa, FL (USA) May 2016 Available online at scholarcommons.usf.edu/ijs International Journal of Speleology Off icial Journal of Union Internationale de Spéléologie Life in the Underworld: Anchialine cave biology in the era of speleogenomics Jorge L. Pérez-Moreno1*, Thomas M. Iliffe2, and Heather D. Bracken-Grissom1 1Department of Biological Sciences, Florida International University, Biscayne Bay Campus, North Miami FL 33181, USA 2Department of Marine Biology, Texas A&M University at Galveston, Galveston, TX 77553, USA Abstract: Anchialine caves contain haline bodies of water with underground connections to the ocean and limited exposure to open air. Despite being found on islands and peninsular coastlines around the world, the isolation of anchialine systems has facilitated the evolution of high levels of endemism among their inhabitants. The unique characteristics of anchialine caves and of their predominantly crustacean biodiversity nominate them as particularly interesting study subjects for evolutionary biology. However, there is presently a distinct scarcity of modern molecular methods being employed in the study of anchialine cave ecosystems. The use of current and emerging molecular techniques, e.g., next-generation sequencing (NGS), bestows an exceptional opportunity to answer a variety of long-standing questions pertaining to the realms of speciation, biogeography, population genetics, and evolution, as well as the emergence of extraordinary morphological and physiological adaptations to these unique environments. The integration of NGS methodologies with traditional taxonomic and ecological methods will help elucidate the unique characteristics and evolutionary history of anchialine cave fauna, and thus the significance of their conservation in face of current and future anthropogenic threats. -
15 International Symposium on Ostracoda
Berliner paläobiologische Abhandlungen 1-160 6 Berlin 2005 15th International Symposium on Ostracoda In Memory of Friedrich-Franz Helmdach (1935-1994) Freie Universität Berlin September 12-15, 2005 Abstract Volume (edited by Rolf Kohring and Benjamin Sames) 2 ---------------------------------------------------------------------------------------------------------------------------------------- Preface The 15th International Symposium on Ostracoda takes place in Berlin in September 2005, hosted by the Institute of Geological Sciences of the Freie Universität Berlin. This is the second time that the International Symposium on Ostracoda has been held in Germany, following the 5th International Symposium in Hamburg in 1974. The relative importance of Ostracodology - the science that studies Ostracoda - in Germany is further highlighted by well-known names such as G.W. Müller, Klie, Triebel and Helmdach, and others who stand for the long tradition of research on Ostracoda in Germany. During our symposium in Berlin more than 150 participants from 36 countries will meet to discuss all aspects of living and fossil Ostracoda. We hope that the scientific communities working on the biology and palaeontology of Ostracoda will benefit from interesting talks and inspiring discussions - in accordance with the symposium's theme: Ostracodology - linking bio- and geosciences We wish every participant a successful symposium and a pleasant stay in Berlin Berlin, July 27th 2005 Michael Schudack and Steffen Mischke CONTENT Schudack, M. and Mischke, S.: Preface -
5 Ostracoda (Crustacea) of the River Bed in the Lower Course...Pdf
ZESZYTY NAUKOWE UNIWERSYTETU SZCZECIŃSKIEGO NR 676 ACTA BIOLOGICA 18 2011 AGNIESZKA SZLAUER-ŁUKASZEWSKA* BEATA KOWALUK-JAGIELSKA*1 OSTRACODA (CRUSTACEA) OF THE RIVER BED IN THE LOWER COURSE OF A LARGE LOWLAND RIVER SYSTEM EXEMPLIFIED BY THE ODER RIVER (POLAND) Abstract The study was carried out in the main branches of the Lower Oder River, differentiated in terms of sediments composition. The aim was performing a comparative studies on the differences in Ostracoda fauna inhabiting various types of sediments. Following bottom sediments were distinguished: hard, sapropel/hard, sapropel and Chironomidae mat. The packet of CANOCO v.4.5 programs was used to investigate the interdependence between the species composition and environmental parameters. Eighteen taxa were found of which 16 were identifi ed to the species level. It was a comparatively high number considering the fact that the samples were collected exclusively from the benthic zone and solely from the main river bed, without fl oodplain. Physocypria kraepelini was an eudominant and Darwinula stevensoni and Cypria ophtalmica were dominants. The samples collected from the sapropel were characterised by the highest density. The case of hard sediments the status of domination was retained as above, but there appeared a new dominant, i.e. Potamocypris unicaudata. The most unique structure of domination was observed in the case of Chironomidae mat, with Limnocythere inopinata as an eudominant and Cypridopsis vidua and P. unicaudata as dominants. As for the species diversity, the hard sediments were characterised by the highest value of Shannon-Wiener Diversity Index, the sapropel/hard sediment was the lowest. The type of river bottom to a great extent affects the density and taxonomic composition of the Ostracoda in rivers. -
Two New Xylophile Cytheroid Ostracods (Crustacea) from Kuril
Arthropod Systematics & Phylogeny 79, 2021, 171–188 | DOI 10.3897/asp.79.e62282 171 Two new xylophile cytheroid ostracods (Crustacea) from Kuril-Kamchatka Trench, with remarks on the systematics and phylogeny of the family Keysercytheridae, Limno cy- theridae, and Paradoxostomatidae Hayato Tanaka1, Hyunsu Yoo2, Huyen Thi Minh Pham3, Ivana Karanovic3,4 1 Tokyo Sea Life Park, 6-2-3 Rinkai-cho, Edogawa-ku, Tokyo 134-8587, Japan 2 Marine Environmental Research and Information Laboratory (MERIL), 17, Gosan-ro, 148 beon-gil, Gun-po-si, Gyoenggi-do, 15180, South Korea 3 Department of Life Science, Research Institute for Convergence of Basic Science, Hanyang University, Seoul 04763, South Korea 4 Institute for Marine and Antarctic Studies, University of Tasmania, Hobart, Tasmania, Australia http://zoobank.org/E29CD94D-AF08-45D2-A319-674F8282D7F2 Corresponding author: Hayato Tanaka ([email protected]) Received 20 December 2020 Accepted 11 May 2021 Academic Editors Anna Hundsdörfer, Martin Schwentner Published 9 June 2021 Citation: Tanaka H, Yoo H, Pham HTM, Karanovic I (2021) Two new xylophile cytheroid ostracods (Crustacea) from Kuril-Kamchatka Trench, with remarks on the systematics and phylogeny of the family Keysercytheridae, Limnocytheridae, and Paradoxostomatidae. Arthropod Systematics & Phylogeny 79: 171–188. https://doi.org/10.3897/asp.79.e62282 Abstract Keysercythere reticulata sp. nov. and Redekea abyssalis sp. nov., collected from the wood fall submerged in the Kuril-Kamchatka Trench (Northwestern Pacific), are only the second records of the naturally occurring, wood-associated ostracod fauna from a depth of over 5000 m. At the same time, K. reticulata is the second and R. abyssalis is the third representative of their respective genera. -
Cypria Lacrima Sp. Nov. a New Ostracoda (Candonidae, Crustacea) Species from Texas, U.S.A
Zoological Studies 56: 15 (2017) doi:10.6620/ZS.2017.56-15 Cypria lacrima sp. nov. A New Ostracoda (Candonidae, Crustacea) Species from Texas, U.S.A. Okan Külköylüoğlu1,*, Derya Akdemir2, Mehmet Yavuzatmaca1, Benjamin F. Schwartz3, 4, and Benjamin T. Hutchins5 1Department of Biology, Faculty of Arts and Science, Abant İzzet Baysal University, Bolu, Turkey. E-mail: [email protected] (Yavuzatmaca) 2Merdivenköy Mah. Şair Arşi Cad. No:16/14, 34732, Kadıköy, İstanbul, Turkey. E-mail: [email protected] 3Edwards Aquifer Research and Data Center, Texas State University, San Marcos, TX 78666, USA 4Department of Biology, Texas State University, San Marcos, TX 78666, USA. E-mail: [email protected] 5Texas Parks and Wildlife, 4200 Smith School Road, Austin TX 78744, U.S.A. E-mail: [email protected] (Received 23 December 2016; Accepted 2 June 2017; Published 21 June 2017; Communicated by Ryuji Machida) Okan Külköylüoğlu, Derya Akdemir, Mehmet Yavuzatmaca, Benjamin F. Schwartz, and Benjamin T. Hutchins (2017) A new ostracod species, Cypria lacrima sp. nov. (Cyclocypridinae) is proposed from an artesian well in Hays County, Texas, U.S.A. The species differs from its conspecies with the following characteristics: unique shape and pit ornamentation on carapace, absence of “e” and “g” setae on both walking and cleaning legs, long gamma seta on Mandibular palp, asymmetric clasping organs and differences in the shape and size of other cheatotaxial parts. A detailed comparison among the species of the genus is provided along with ecological implications. This report increases the geographic distribution of the genus in the southern USA. Key words: Cyclocypridinae, New species, Taxonomy, Artesian well, Hays County. -
Crustacea: Ostracoda) De Pozas Temporales
Heterocypris bosniaca (Petkowski et al., 2000): Ecología y ontogenia de un ostrácodo (Crustacea: Ostracoda) de pozas temporales. ESIS OCTORAL T D Josep Antoni Aguilar Alberola Departament de Microbiologia i Ecologia Universitat de València Programa de doctorat en Biodiversitat i Biologia Evolutiva Heterocypris bosniaca (Petkowski et al., 2000): Ecología y ontogenia de un ostrácodo (Crustacea: Ostracoda) de pozas temporales. Tesis doctoral presentada por Josep Antoni Aguilar Alberola 2013 Dirigida por Francesc Mesquita Joanes Imagen de cubierta: Vista lateral de la fase eclosionadora de Heterocypris bosniaca. Más detalles en el capítulo V. Tesis titulada "Heterocypris bosniaca (Petkowski et al., 2000): Ecología y ontogenia de un ostrácodo (Crustacea: Ostracoda) de pozas temporales" presentada por JOSEP ANTONI AGUILAR ALBEROLA para optar al grado de Doctor en Ciencias Biológicas por la Universitat de València. Firmado: Josep Antoni Aguilar Alberola Tesis dirigida por el Doctor en Ciencias Biológicas por la Universitat de València, FRANCESC MESQUITA JOANES. Firmado: F. Mesquita i Joanes Profesor Titular de Ecología Universitat de València A Laura, Paco, i la meua família Resumen Los ostrácodos son un grupo de pequeños crustáceos con amplia distribución mundial, cuyo cuerpo está protegido por dos valvas laterales que suelen preservarse con facilidad en el sedimento. En el presente trabajo se muestra la primera cita del ostrácodo Heterocypris bosniaca Petkowski, Scharf y Keyser, 2000 para la Península Ibérica. Se trata de una especie de cipridoideo muy poco conocida que habita pozas de aguas temporales. Se descubrió el año 2000 en Bosnia y desde entonces solo se ha reportado su presencia en Israel (2004) y en Valencia (presente trabajo). -
Fossil Calibrations for the Arthropod Tree of Life
bioRxiv preprint doi: https://doi.org/10.1101/044859; this version posted June 10, 2016. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY 4.0 International license. FOSSIL CALIBRATIONS FOR THE ARTHROPOD TREE OF LIFE AUTHORS Joanna M. Wolfe1*, Allison C. Daley2,3, David A. Legg3, Gregory D. Edgecombe4 1 Department of Earth, Atmospheric & Planetary Sciences, Massachusetts Institute of Technology, Cambridge, MA 02139, USA 2 Department of Zoology, University of Oxford, South Parks Road, Oxford OX1 3PS, UK 3 Oxford University Museum of Natural History, Parks Road, Oxford OX1 3PZ, UK 4 Department of Earth Sciences, The Natural History Museum, Cromwell Road, London SW7 5BD, UK *Corresponding author: [email protected] ABSTRACT Fossil age data and molecular sequences are increasingly combined to establish a timescale for the Tree of Life. Arthropods, as the most species-rich and morphologically disparate animal phylum, have received substantial attention, particularly with regard to questions such as the timing of habitat shifts (e.g. terrestrialisation), genome evolution (e.g. gene family duplication and functional evolution), origins of novel characters and behaviours (e.g. wings and flight, venom, silk), biogeography, rate of diversification (e.g. Cambrian explosion, insect coevolution with angiosperms, evolution of crab body plans), and the evolution of arthropod microbiomes. We present herein a series of rigorously vetted calibration fossils for arthropod evolutionary history, taking into account recently published guidelines for best practice in fossil calibration. -
Soft Body Morphology, Dissection and Slide-Preparation of Ostracoda: a Primer
Joannea Geol. Paläont. 11: 327-343 (2011) Soft body morphology, dissection and slide-preparation of Ostracoda: a primer Tadeusz NAMIOTKO, Dan L. DANIELOPOL & Angel BALTANÁS Abstract: Most commonly used techniques for treating ostracod soft body for taxonomi- cal purposes with optical microscopy are described with emphasis on the order Podo- copida. A variety of procedures for pre-treatment, storage, recovery of dried specimens, dissection, temporary and permanent mounting, and staining methods are presented and evaluated. General morphology and terminology of the ostracod appendages are also summarised. Key Words: Ostracoda; Dissection; Mounting; Staining; Appendages; Morphology. 1. Introduction One of best diagnostic and most conspicuous trait of Ostracoda is a bivalved carapace that may completely envelop the whole animal body with limbs. Ostracodologists usu- ally refer to calcified valves as “hard parts”, whereas to the appendages and other in- ternal organs as „soft parts”. The classification of Recent ostracods is based mainly on differences in the soft part morphology which is ordinarily of little use by palaeontolo- gists. However, considering the close functional relationship often existing between the soft and hard parts, each expressing to a considerable extent the morphology of the other, even basic knowledge on the appendages without doubt should help palaeonto- logists to better understand and interpret various features displayed in the valves of the fossil ostracods. Examining living material collected from modern habitats enables pa- laeontologists also to become familiar with intraspecific variability or ecology, which could greatly facilitate both taxonomical and palaeoenvironmental studies. Therefore the morphology and terminology of the soft parts of ostracods is outlined (focusing on limbs) in this primer prior to the description of various laboratory techniques involved in the appendage preparation for optical microscopy. -
Distribution of Ostracods in West-Central Argentina Related to Host-Water Chemistry and Climate: Implications for Paleolimnology
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by Servicio de Difusión de la Creación Intelectual J Paleolimnol (2017) 58:101–117 DOI 10.1007/s10933-017-9963-1 ORIGINAL PAPER Distribution of ostracods in west-central Argentina related to host-water chemistry and climate: implications for paleolimnology D. Sabina D’Ambrosio . Adriana García . Analía R. Díaz . Allan R. Chivas . María C. Claps Received: 6 October 2016 / Accepted: 24 March 2017 / Published online: 30 March 2017 © Springer Science+Business Media Dordrecht 2017 Abstract Ecological and biogeographical studies of multivariate analysis of the data indicated that Neotropical non-marine ostracods are rare, although salinity is the most significant variable segregating such information is needed to develop reliable two ostracod groups. Limnocythere aff. staplini is the paleoecological and paleoclimatic reconstructions only species that develops abundant populations in for the region. An extensive, yet little explored South the saline ephemeral Laguna Llancanelo during American area of paleoclimatic interest, is the arid- almost all seasons, and is accompanied by scarce semiarid ecotone (Arid Diagonal) that separates arid Cypridopsis vidua in summer. The latter species is Patagonia from subtropical/tropical northern South abundant in freshwater lotic sites, where Ilyocypris America, and lies at the intersection of the Pacific and ramirezi, Herpetocypris helenae, and Cyprididae Atlantic atmospheric circulation systems. This study indet. are also found in large numbers. Darwinula focused on the Laguna Llancanelo basin, Argentina, a stevensoni, Penthesilenula incae, Heterocypris incon- Ramsar site located within the Arid Diagonal, and gruens, Chlamydotheca arcuata, Chlamydotheca sp., was designed to build a modern dataset using Herpetocypris helenae, and Potamocypris smarag- ostracods (diversity, spatial distribution, seasonality, dina prefer freshwater lentic conditions (springs), habitat preferences) and water chemistry. -
E:\Krzymińska Po Recenzji\Sppap29.Vp
JARMILA KRZYMIÑSKA, TADEUSZ NAMIOTKO Quaternary Ostracoda of the southern Baltic Sea (Poland) – taxonomy, palaeoecology and stratigraphy Polish Geological Institute Special Papers,29 WARSZAWA 2013 CONTENTS Introduction .....................................................6 Area covered and geological setting .........................................6 History of research on Ostracoda from Quaternary deposits of the Polish part of the Baltic Sea ..........8 Material and methods ...............................................10 Results and discussion ...............................................12 General overwiew on the distribution and diversity of Ostracoda in Late Glacial to Holocene sediments of the studied cores..........................12 An outline of structure of the ostracod carapace and valves .........................20 Pictorial key to Late Glacial and Holocene Ostracoda of the Polish part of the Baltic Sea and its coastal area ..............................................22 Systematic record and description of species .................................26 Hierarchical taxonomic position of genera of Quaternary Ostracoda of the southern Baltic Sea ......26 Description of species ...........................................27 Stratigraphy, distribution and palaeoecology of Ostracoda from the Quaternary of the southern Baltic Sea ...........................................35 Late Glacial and early Holocene fauna ...................................36 Middle and late Holocene fauna ......................................37 Concluding -
Subrecent Ostracoda Associations and the Environmental Conditions of Karstic Travertine Bridges on the Zamantı River, Southern Turkey
Cemal TUNOĞLU, İbrahim Kadri ERTEKİN Türkiye Jeoloji Bülteni Cilt 51, Sayı 3, Aralık 2008 Geological Bulletin of Turkey Volume 51, Number 3, December 2008 2008 Subrecent Ostracoda Associations and the Environmental Conditions of Karstic Travertine Bridges on the Zamantı River, Southern Turkey Zamantı Irmağı Üzerinde Yer Alan Karstic Travertenlerde Yarı-Güncel Ostrakod Topluluğu ve Ortamsal Özellikleri, Güney Türkiye Cemal TUNOĞLU, İbrahim Kadri ERTEKİN Hacettepe University, Engineering Faculty, Geological Engineering Department, 06800 Beytepe-Ankara/Turkey (e-mail: [email protected]) ABSTRACT Subrecent Ostracoda associations have been identified in karstic travertine deposits of the Zamantı River. In this study, seven species and three taxa left in open nomenclature (mainly of freshwater origin) were investigated: Limnocythere inopinata, Eucyprinotus rostratus, Psychodromus olivaceus, Scottia pseudobrowniana, Potomocypris fallax, Candona neglecta, Heterocypris barbara, Psychodromus sp., Trajancypris sp. and Cypridopsis sp. Recent climatic and hydrochemical conditions were also determined in detail in order to provide a picture of the environmental conditions dominating over the fauna (Ostracoda) and flora (Bacillariophyceae/diatomeae, Chlorophyceae/green algae, Cyanophyceae/blue-green algae). The results suggest that spring waters with a high carbon-dioxide content support the algale population growth. Key words: Karstic travertine bridges, Ostracoda, subrecent, Turkey. ÖZ Zamantı Irmağı üzeride yer alan karstik traverten çökellerinde -
CLASE OSTRACODA. Orden Podocopida
Revista IDE@ - SEA, nº 74 (30-06-2015): 1–10. ISSN 2386-7183 1 Ibero Diversidad Entomológica @ccesible www.sea-entomologia.org/IDE@ Clase: Ostracoda Orden Podocopida Manual CLASE OSTRACODA Orden Podocopida Ángel Baltanás1 & Francesc Mesquita-Joanes2 1 Dep. Ecología (Fac. Ciencias), Universidad Autónoma de Madrid, C/ Darwin, 2, 28049 Madrid (España). [email protected] 2 Inst. “Cavanilles” de Biodiversidad y Biología Evolutiva, Universidad de Valencia, Av. Dr. Moliner, 50, 46100 Burjassot (España). [email protected] 1. Breve definición del grupo y principales caracteres diagnósticos Según el criterio más extendido actualmente, y que aquí seguiremos, se considera a los ostrácodos como una clase (Cl. Ostracoda) del Subphylum Crustacea, perteneciente al Phylum Arthropoda. No obstante, existen autores que defienden su pertenencia, como subclase, a la clase Maxillopoda (que incluiría tam- bién a branquiuros, tantulocáridos, copépodos y cirrípedos, entre otros). Más allá de esta circunstancia, los ostrácodos pueden describirse como crustáceos de tamaño mediano a pequeño (desde los 0,2 a los 5 mm; con casos excepcionales que alcanzan los 3 cm), que poseen un ojo naupliar medial, con la segmen- tación corporal severamente reducida, entre cinco y ocho pares de apéndices y, como elemento más significativo, la presencia de un caparazón bivalvo. Aunque el caparazón contiene en sí mismo rasgos diagnósticos (tamaño, forma, ornamentación...) que ayudan a la correcta asignación taxonómica de los ostrácodos, su presencia—que obstaculiza la observación in vivo de muchos detalles diagnósticos del animal— y el pequeño tamaño de estos organismos obligan con frecuencia a la disección de los ejempla- res para su identificación, especialmente para la identificación a nivel específico.