Marine Benthic Algae of Johnston Atoll: New Species Records, Spatial Distribution, and Taxonomic Affinities with Neighboring Islands1
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A Forensic and Phylogenetic Survey of Caulerpa Species
J. Phycol. 42, 1113–1124 (2006) r 2006 by the Phycological Society of America DOI: 10.1111/j.1529-8817.2006.0271.x A FORENSIC AND PHYLOGENETIC SURVEY OF CAULERPA SPECIES (CAULERPALES, CHLOROPHYTA) FROM THE FLORIDA COAST, LOCAL AQUARIUM SHOPS, AND E-COMMERCE: ESTABLISHING A PROACTIVE BASELINE FOR EARLY DETECTION1 Wytze T. Stam2 Jeanine L. Olsen Department of Marine Benthic Ecology and Evolution, Center for Ecological and Evolutionary Studies, Biological Centre, University of Groningen, PO Box 14, 9750 AA Haren, The Netherlands Susan Frisch Zaleski University of Southern California Sea Grant Program, 3616 Trousdale Parkway, Los Angeles, California 90089-0373, USA Steven N. Murray Department of Biological Science, California State University, Fullerton, PO Box 6850, Fullerton, California 92834-6850, USA Katherine R. Brown and Linda J. Walters Department of Biology, University of Central Florida, Orlando, Florida 32816, USA Baseline genotypes were established for 256 in- researchers interested in the evolution and speciat- dividuals of Caulerpa collected from 27 field loca- ion of Caulerpa. tions in Florida (including the Keys), the Bahamas, Key index words: aquarium trade; Caulerpa; e-com- US Virgin Islands, and Honduras, nearly doubling merce; invasive species; ITS; marine conservation; the number of available GenBank sequences. On the phylogeny; tufA basis of sequences from the nuclear rDNA-ITS 1 þ 2 and the chloroplast tufA regions, the phylogeny of Abbreviations: CTAB, cetyltrimethylammonium bro- Caulerpa was reassessed and the presence of inva- mide; ITS, internally transcribed spacer; MCMC, sive strains was determined. Surveys in central Flor- Markov chain Monte Carlo analysis ida and southern California of 4100 saltwater aquarium shops and 90 internet sites revealed that 450% sold Caulerpa. -
E-Commerce and Caulerpa: Unregulated Dispersal of Invasive
RESEARCH COMMUNICATIONS RESEARCH COMMUNICATIONS E-commerce and Caulerpa: unregulated 75 dispersal of invasive species Linda J Walters1*, Katherine R Brown1, Wytze T Stam2, and Jeanine L Olsen2 Professional aquarists and hobbyists are thought to be the source of invasions of the aquarium strain of the green macroalga Caulerpa taxifolia in the Mediterranean, southern California, and Australia. The US Department of Agriculture, Animal and Plant Health Inspection Service (USDA–APHIS) restricted interstate commerce and importation of the Mediterranean clone of C taxifolia prior to the California invasion and is cur- rently deciding if it should strengthen regulation of this genus as more species of Caulerpa are being described as invasive. Here we document the importance of e-commerce as a mode of dispersal for many species of Caulerpa in the United States. We purchased Caulerpa from 30 internet retailers and 60 internet auction sites representing 25 states and Great Britain. Twelve different Caulerpa species were confirmed using DNA sequenc- ing. Only 10.6% of sellers provided the correct genus and species names with their shipments. Thirty purchases of “live rock” provided four species of Caulerpa, as well as 53 additional marine species. Our results confirm the extensive e-commerce availability of this invasive genus and its high dispersal potential via postal services and hobbyists. We recommend that both eBay and the USDA maximize regulation of Caulerpa. Front Ecol Environ 2006; 4(2): 75–79 any species of the green macroalga Caulerpa some of the “feather Caulerpas”: C taxifolia, C sertulari- M(Chlorophyta: Ulvophyceae) are highly invasive oides, and C mexicana) remain extremely popular with and the economics and ecological impacts associated with aquarium hobbyists because they are attractive in salt these introductions are well documented (eg de Villèle water tanks and are easy to clonally propagate (Smith and and Verlaque 1995; Davis et al. -
Fingerprinting Marine Macrophytes in Blue Carbon Habitats
Fingerprinting Marine Macrophytes in Blue Carbon Habitats Thesis by Alejandra Ortega In Partial Fulfillment of the Requirements for the Degree of Doctor of Philosophy in Bioscience King Abdullah University of Science and Technology Thuwal, Kingdom of Saudi Arabia November, 2019 2 EXAMINATION COMMITTEE PAGE The thesis of Alejandra Ortega is approved by the examination committee. Committee Chairperson and Thesis Supervisor: Prof. Carlos M. Duarte Committee Members: Prof. Mark Tester, Prof. Takashi Gojobori, and Prof. Hugo de Boer [External] 3 © November, 2019 Alejandra Ortega All Rights Reserved 4 ABSTRACT Fingerprinting Marine Macrophytes in Blue Carbon Habitats Alejandra Ortega Seagrass, mangrove, saltmarshes and macroalgae - the coastal vegetated habitats, offer a promising nature-based solution to climate change mitigation, as they sequester carbon in their living biomass and in marine sediments. Estimation of the macrophyte organic carbon contribution to coastal sediments is key for understanding the sources of blue carbon sequestration, and for establishing adequate conservation strategies. Nevertheless, identification of marine macrophytes has been challenging and current estimations are uncertain. In this dissertation, time- and cost-efficient DNA-based methods were used to fingerprint marine macrophytes and estimate their contribution to the organic pool accumulated in blue carbon habitats. First, a suitable short-length DNA barcode from the universal 18S gene was chosen among six barcoding regions tested, as it successfully recovered degraded DNA from sediment samples and fingerprinted marine macrophyte taxa. Second, an experiment was performed to test whether the abundance of eDNA represents the content of organic carbon within the macrophytes; results supported this notion, indicating a positive correlation (R2 = 0.85) between eDNA and organic carbon. -
Marine Algae of French Frigate Shoals, Northwestern Hawaiian Islands: Species List and Biogeographic Comparisons1
Marine Algae of French Frigate Shoals, Northwestern Hawaiian Islands: Species List and Biogeographic Comparisons1 Peter S. Vroom,2 Kimberly N. Page,2,3 Kimberly A. Peyton,3 and J. Kanekoa Kukea-Shultz3 Abstract: French Frigate Shoals represents a relatively unpolluted tropical Pa- cific atoll system with algal assemblages minimally impacted by anthropogenic activities. This study qualitatively assessed algal assemblages at 57 sites, thereby increasing the number of algal species known from French Frigate Shoals by over 380% with 132 new records reported, four being species new to the Ha- waiian Archipelago, Bryopsis indica, Gracilaria millardetii, Halimeda distorta, and an unidentified species of Laurencia. Cheney ratios reveal a truly tropical flora, despite the subtropical latitudes spanned by the atoll system. Multidimensional scaling showed that the flora of French Frigate Shoals exhibits strong similar- ities to that of the main Hawaiian Islands and has less commonality with that of most other Pacific island groups. French Frigate Shoals, an atoll located Martini 2002, Maragos and Gulko 2002). close to the center of the 2,600-km-long Ha- The National Oceanic and Atmospheric Ad- waiian Archipelago, is part of the federally ministration (NOAA) Fisheries Coral Reef protected Northwestern Hawaiian Islands Ecosystem Division (CRED) and Northwest- Coral Reef Ecosystem Reserve. In stark con- ern Hawaiian Islands Reef Assessment and trast to the more densely populated main Ha- Monitoring Program (NOWRAMP) began waiian Islands, the reefs within the ecosystem conducting yearly assessment and monitoring reserve continue to be dominated by top of subtropical reef ecosystems at French predators such as sharks and jacks (ulua) and Frigate Shoals in 2000 to better support the serve as a refuge for numerous rare and long-term conservation and protection of endangered species no longer found in more this relatively intact ecosystem and to gain a degraded reef systems (Friedlander and De- better understanding of natural biological and oceanographic processes in this area. -
Copyright© 2017 Mediterranean Marine Science
Mediterranean Marine Science Vol. 18, 2017 Introduced marine macroflora of Lebanon and its distribution on the Levantine coast BITAR G. Lebanese University, Faculty of Sciences, Hadaeth, Beirut, Lebanon RAMOS-ESPLÁ A. Centro de Investigación Marina de Santa Pola (CIMAR), Universidad de Alicante, 03080 Alicante OCAÑA O. Departamento de Oceanografía Biológica y Biodiversidad, Fundación Museo del Mar, Muelle Cañonero Dato s.n, 51001 Ceuta SGHAIER Y. Regional Activity Centre for Specially Protected Areas (RAC/SPA) FORCADA A. Departamento de Ciencias del Mar y Biología Aplicada, Universidad de Alicante, Po Box 99, Edificio Ciencias V, Campus de San Vicente del Raspeig, E-03080, Alicante VALLE C. Departamento de Ciencias del Mar y Biología Aplicada, Universidad de Alicante, Po Box 99, Edificio Ciencias V, Campus de San Vicente del Raspeig, E-03080, Alicante EL SHAER H. IUCN (International Union for Conservation of Nature), Regional Office for West Asia Sweifiyeh, Hasan Baker Al Azazi St. no 20 - Amman VERLAQUE M. Aix Marseille University, CNRS/INSU, Université de Toulon, IRD, Mediterranean Institute of Oceanography (MIO), UM 110, GIS Posidonie, 13288 Marseille http://dx.doi.org/10.12681/mms.1993 Copyright © 2017 Mediterranean Marine Science http://epublishing.ekt.gr | e-Publisher: EKT | Downloaded at 04/08/2019 04:30:09 | To cite this article: BITAR, G., RAMOS-ESPLÁ, A., OCAÑA, O., SGHAIER, Y., FORCADA, A., VALLE, C., EL SHAER, H., & VERLAQUE, M. (2017). Introduced marine macroflora of Lebanon and its distribution on the Levantine coast. Mediterranean Marine Science, 18(1), 138-155. doi:http://dx.doi.org/10.12681/mms.1993 http://epublishing.ekt.gr | e-Publisher: EKT | Downloaded at 04/08/2019 04:30:09 | Review Article Mediterranean Marine Science Indexed in WoS (Web of Science, ISI Thomson) and SCOPUS The journal is available on line at http://www.medit-mar-sc.net DOI: http://dx.doi.org/10.12681/mms.1993 The introduced marine macroflora of Lebanon and its distribution on the Levantine coast G. -
Marine Macroalgal Biodiversity of Northern Madagascar: Morpho‑Genetic Systematics and Implications of Anthropic Impacts for Conservation
Biodiversity and Conservation https://doi.org/10.1007/s10531-021-02156-0 ORIGINAL PAPER Marine macroalgal biodiversity of northern Madagascar: morpho‑genetic systematics and implications of anthropic impacts for conservation Christophe Vieira1,2 · Antoine De Ramon N’Yeurt3 · Faravavy A. Rasoamanendrika4 · Sofe D’Hondt2 · Lan‑Anh Thi Tran2,5 · Didier Van den Spiegel6 · Hiroshi Kawai1 · Olivier De Clerck2 Received: 24 September 2020 / Revised: 29 January 2021 / Accepted: 9 March 2021 © The Author(s), under exclusive licence to Springer Nature B.V. 2021 Abstract A foristic survey of the marine algal biodiversity of Antsiranana Bay, northern Madagas- car, was conducted during November 2018. This represents the frst inventory encompass- ing the three major macroalgal classes (Phaeophyceae, Florideophyceae and Ulvophyceae) for the little-known Malagasy marine fora. Combining morphological and DNA-based approaches, we report from our collection a total of 110 species from northern Madagas- car, including 30 species of Phaeophyceae, 50 Florideophyceae and 30 Ulvophyceae. Bar- coding of the chloroplast-encoded rbcL gene was used for the three algal classes, in addi- tion to tufA for the Ulvophyceae. This study signifcantly increases our knowledge of the Malagasy marine biodiversity while augmenting the rbcL and tufA algal reference libraries for DNA barcoding. These eforts resulted in a total of 72 new species records for Mada- gascar. Combining our own data with the literature, we also provide an updated catalogue of 442 taxa of marine benthic -
Codium Pulvinatum (Bryopsidales, Chlorophyta), a New Species from the Arabian Sea, Recently Introduced Into the Mediterranean Sea
Phycologia Volume 57 (1), 79–89 Published 6 November 2017 Codium pulvinatum (Bryopsidales, Chlorophyta), a new species from the Arabian Sea, recently introduced into the Mediterranean Sea 1 2 3 4 5 RAZY HOFFMAN *, MICHAEL J. WYNNE ,TOM SCHILS ,JUAN LOPEZ-BAUTISTA AND HEROEN VERBRUGGEN 1School of Plant Sciences and Food Security, Tel Aviv University, Tel Aviv 69978, Israel 2University of Michigan Herbarium, 3600 Varsity Drive, Ann Arbor, Michigan 48108, USA 3University of Guam Marine Laboratory, Mangilao, Guam 96923, USA 4Biological Sciences, University of Alabama, Box 35487, Tuscaloosa, Alabama 35487, USA 5School of Biosciences, University of Melbourne, Victoria 3010, Australia ABSTRACT: Codium pulvinatum sp. nov. (Bryopsidales, Chlorophyta) is described from the southern shores of Oman and from the Mediterranean shore of Israel. The new species has a pulvinate to mamillate–globose habit and long narrow utricles. Molecular data from the rbcL gene show that the species is distinct from closely related species, and concatenated rbcL and rps3–rpl16 sequence data show that it is not closely related to other species with similar external morphologies. The recent discovery of well-established populations of C. pulvinatum along the central Mediterranean coast of Israel suggests that it is a new Lessepsian migrant into the Mediterranean Sea. The ecology and invasion success of the genus Codium, now with four alien species reported for the Levantine Sea, and some ecological aspects are also discussed in light of the discovery of the new species. KEY WORDS: Codium pulvinatum, Israel, Lessepsian migrant, Levantine Sea, Oman, rbcL, rps3–rpl16 INTRODUCTION updated), except for ‘TAU’. All investigated specimens are listed in Table S1 (collecting data table). -
Codium(Chlorophyta) Species Presented in the Galápagos Islands
Hidrobiológica 2016, 26 (2): 151-159 Codium (Chlorophyta) species presented in the Galápagos Islands Las especies del género Codium (Chlorophyta) presentes en las Islas Galápagos Max E. Chacana1, Paul C. Silva1, Francisco F. Pedroche1, 2 and Kathy Ann Miller1 1University Herbarium, University of California, Berkeley, CA 94720-2465. USA 2Depto. Ciencias Ambientales, Universidad Autónoma Metropolitana, Unidad Lerma, Estado de México, 52007. México e-mail: [email protected] Chacana M. E., P. C. Silva, F. F. Pedroche and K. A. Miller. 2016. Codium (Chlorophyta) species presented in the Galápagos Islands. Hidrobiológica 26 (2): 151-159. ABSTRACT Background. The Galápagos Islands have been the subject of numerous scientific expeditions. The chief source of in- formation on their marine algae is the report published in 1945 by the late William Randolph Taylor on collections made by the Allan Hancock Pacific Expedition of 1934. Prior to this work, there were no published records ofCodium from the Galápagos. Taylor recorder six species of Codium of which C. isabelae and C. santamariae were new descriptions. Goals. On the basis of collections made since 1939, we have reviewed the registry of Codium in these islands. Methods. Com- parative analysis based on morphology and utricle anatomy. Results. Codium isabelae and C. santamariae are combined under the former name. Records of C. cervicorne and C. dichotomum also are referred to C. isabelae, those of C. setchellii are based partly on representatives of C. picturatum, a recently described species from the Mexican Pacific, Panama, Colombia, and Hawaii, and partly on representatives of a species similar if not identical to C. -
Molecular Phylogeography and Climate Change Biology of the Invasive Green Marine Macroalgae Caulerpa Taxifolia and Caulerpa Cylindracea in Australia
Molecular phylogeography and climate change biology of the invasive green marine macroalgae Caulerpa taxifolia and Caulerpa cylindracea in Australia Submitted by William Maxwell Grant BSc (Hons) Thesis submitted in total fulfillment of the requirements for the degree of Doctor of Philosophy Department of Ecology and Environmental Sciences School of Biology Faculty of Science The University of Adelaide Adelaide, South Australia 5005 Australia February 2015 1 Table of Contents Acknowledgments 4 Thesis Summary 6 Thesis Declaration 9 Chapter One: Thesis Introduction Introduction 11 Study Aims 17 Chapter Two: Molecular Ecology of Caulerpa taxifolia and Caulerpa cylindracea : a review Statement of Authorship 20 Caulerpa taxifolia 21 Molecular studies on Caulerpa taxifolia 23 Caulerpa cylindracea 33 Molecular studies on Caulerpa cylindracea 35 Conclusion 37 Chapter Three: Phylogeography of the invasive marine green macroalga Caulerpa taxifolia (M. Vahl) C.Agardh in Australian waters: a next generation sequencing approach to marker discovery Statement of Authorship 43 Abstract 44 Introduction 45 Materials and Methods: 49 Results: 56 Discussion 66 Chapter 4: Phylogeography of the invasive marine green macroalga Caulerpa cylindracea Sonder in Australia. Statement of Authorship 74 2 Abstract 75 Introduction 76 Materials and Methods: 79 Results 82 Discussion 88 Chapter 5: The effect of climate change experiments on DNA, RNA, and protein concentrations, and protein profiles native and invasive Caulerpa spp. Statement of Authorship Statement of Authorship 92 Abstract 93 Introduction 94 Materials and Methods: 97 Results: 99 Discussion 108 Chapter 6: General Discussion General discussion 114 References 122 3 Acknowledgments I would like to thank my supervisors, Dr Fred Gurgel, Dr Marty Deveney, and Assoc. -
Taxonomia E Distribuição Do Gênero Caulerpalamouroux
Acta bot. bras. 22(4): 914-928. 2008. Taxonomia e distribuição do gênero Caulerpa Lamouroux (Bryopsidales - Chlorophyta) na costa de Pernambuco e Arquipélago de Fernando de Noronha, Brasil Suellen Brayner1,3, Sonia Maria Barreto Pereira1,2 e Maria Elizabeth Bandeira-Pedrosa2 Recebido em 22/03/2006. Aceito em 18/12/2007 RESUMO – (Taxonomia e distribuição do gênero Caulerpa Lamouroux (Bryopsidales - Chlorophyta) na costa de Pernambuco e Arquipélago de Fernando de Noronha, Brasil). Este trabalho identifica e fornece a distribuição do gênero Caulerpa na costa de Pernambuco (07º30’ S e 09º00’ W) e no Arquipélago de Fernando de Noronha (03º51’ S e 32º25’ W). As coletas foram realizadas em 32 praias da costa de Pernambuco no período entre abril/2004 a novembro/2005, na região entre-marés. Em Fernando de Noronha as coletas foram feitas em junho/2006, na região entre marés e no infralitoral (10, 15 e 21 m de profundidade), em oito praias. Foram, também, analisadas as exsicatas de Caulerpa depositadas no Herbário Professor Vasconcelos Sobrinho (PEUFR) da Universidade Federal Rural de Pernambuco. Os resultados mostram que o gênero Caulerpa está representado na costa de Pernambuco, por 19 táxons infragenéricos. Algumas espécies apresentaram distribuição restrita como C. kempfii Joly & Pereira, C. lanuginosa J. Agardh e C. serrulata (Forssk.) J. Agardh. Para o Arquipélago de Fernando de Noronha foram registrados três táxons infragenéricos. Palavras-chave: algas marinhas, Brasil, Caulerpa, levantamento florístico, Nordeste ABSTRACT – (Taxonomy and distribution of the genus Caulerpa Lamouroux (Bryopsidales - Chlorophyta) on the coast of Pernambuco State and Fernando de Noronha Archipelago, Brazil). This paper analyzes the taxonomy and distribution of the genus Caulerpa on the coast of Pernambuco (07º30’S; 09º00’W) and in the Fernando de Noronha Archipelago (03º51’S; 32º25’W). -
Ecologie Trophique De La Tortue Verte Chelonia Mydas Dans Les Herbiers Marins Et Algueraies Du Sud-Ouest De L’Océan Indien
UNIVERSITE DE LA REUNION ECOLE DOCTORALE INTERDISCIPLINAIRE Thèse de Doctorat présentée pour obtenir le grade de Docteur Discipline : Biologie Spécialité : Biologie de l’Environnement et des Populations, Ecologie par Katia BALLORAIN Ecologie trophique de la tortue verte Chelonia mydas dans les herbiers marins et algueraies du sud-ouest de l’océan Indien Soutenue publiquement le 12 Février 2010 devant la commission d’examen constituée de : Jean-Yves GEORGES Co-directeur de thèse Chargé de recherche, CNRS IPHC, Strasbourg Henri GRIZEL Co-directeur de thèse Directeur de recherche, IFREMER, La Réunion Hervé FRITZ Rapporteur Directeur de recherche, CNRS LBBE, Lyon Charles François BOUDOURESQUE Rapporteur Professeur, Centre d’Océanologie, Marseille Henrich BRUGGEMANN Examinateur Professeur, ECOMAR, Université de La Réunion Simon BENHAMOU Examinateur Directeur de recherche, CNRS CEFE, Montpellier Georges HUGHES Membre invité Ex-Directeur du KwaZulu-Natal Wildlife, Afrique du Sud Stéphane CICCIONE Membre invité Directeur de Kélonia l’observatoire des tortues marines, La Réunion Résumé Les relations interspécifiques sont un indicateur naturel de l’état de santé d’un écosystème et de son éventuelle évolution. Dans le contexte actuel de changement climatique et d’intensification des activités humaines, nous décrivons, par une approche intégrée, les interactions existant entre les tortues vertes et leurs ressources trophiques, afin de contribuer à la compréhension de la dynamique de la biodiversité marine. La tortue verte est la seule tortue marine herbivore aux stades sub-adulte et adulte. Elle se nourrit principalement sur des herbiers de phanérogames marines et des algueraies en milieu côtier relativement peu profonds et constitue ainsi un modèle privilégié pour étudier l’écologie trophique et fonctionnelle des tortues marines en conditions naturelles. -
Rapid Biodiversity Assessment of REPUBLIC of NAURU
RAPID BIODIVERSITY ASSESSMENT OF REPUBLIC OF NAURU JUNE 2013 NAOERO GO T D'S W I LL FIRS SPREP Library/IRC Cataloguing-in-Publication Data McKenna, Sheila A, Butler, David J and Wheatley, Amanda. Rapid biodiversity assessment of Republic of Nauru / Sheila A. McKeena … [et al.] – Apia, Samoa : SPREP, 2015. 240 p. cm. ISBN: 978-982-04-0516-5 (print) 978-982-04-0515-8 (ecopy) 1. Biodiversity conservation – Nauru. 2. Biodiversity – Assessment – Nauru. 3. Natural resources conservation areas - Nauru. I. McKeena, Sheila A. II. Butler, David J. III. Wheatley, Amanda. IV. Pacific Regional Environment Programme (SPREP) V. Title. 333.959685 © SPREP 2015 All rights for commercial / for profit reproduction or translation, in any form, reserved. SPREP authorises the partial reproduction or translation of this material for scientific, educational or research purposes, provided that SPREP and the source document are properly acknowledged. Permission to reproduce the document and / or translate in whole, in any form, whether for commercial / for profit or non-profit purposes, must be requested in writing. Secretariat of the Pacific Regional Environment Programme P.O. Box 240, Apia, Samoa. Telephone: + 685 21929, Fax: + 685 20231 www.sprep.org The Pacific environment, sustaining our livelihoods and natural heritage in harmony with our cultures. RAPID BIODIVERSITY ASSESSMENT OF REPUBLIC OF NAURU SHEILA A. MCKENNA, DAVID J. BUTLER, AND AmANDA WHEATLEY (EDITORS) NAOERO GO T D'S W I LL FIRS CONTENTS Organisational Profiles 4 Authors and Participants 6 Acknowledgements