The Genus Drosophila Is Characterized by a Large Number of Sibling Species Showing Evolutionary Significance
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The Male Terminalia of Seven American Species of Drosophila
Alpine Entomology 1 2017, 17–31 | DOI 10.3897/alpento.1.20669 The male terminalia of seven American species of Drosophila (Diptera, Drosophilidae) Carlos Ribeiro Vilela1 1 Departamento de Genética e Biologia Evolutiva, Instituto de Biociências, Universidade de São Paulo, Rua do Matão 277, Cidade Universitária “Armando de Salles Oliveira”, São Paulo - SP, 05508-090, Brazil http://zoobank.org/197D5E09-957B-4804-BF78-23F853C68B0A Corresponding author: Carlos Ribeiro Vilela ([email protected]) Abstract Received 28 August 2017 The male terminalia of seven species of Drosophila endemic to the New World are de- Accepted 28 September 2017 scribed or redescribed and illustrated: one in the hydei subgroup (D. guayllabambae) and Published 20 November 2017 four in the mulleri subgroup (D. arizonae, D. navojoa, D. nigrodumosa, and D. sonorae) of the repleta group; one in the sticta group (D. sticta) and one so far unassigned to group Academic editor: (D. comosa). The D. guayllabambae terminalia redescription is based on a wild-caught Patrick Rohner fly. The redescriptions of the terminalia of the four species in the mulleri subgroup are based on strain specimens, while those of D. sticta and D. comosa terminalia are based Key Words on their holotypes. D. guayllabambae seems to be a strictly mountainous species of the Ecuadorian and Peruvian Andes. D. nigrodumosa is apparently endemic to Venezuela, oc- Drosophila subgenus curring in the Andes as well as at lower altitudes. The remaining five occurs only at lower Drosophilinae altitudes of the American continent. The detailed line drawings depicted in this paper aim line drawings to help interested taxonomists to tell those species apart. -
Comparison of Baits for Monitoring the Spotted Wing Drosophila, Drosophila Suzukii
AN ABSTRACT OF THE THESIS OF Joseph R. Kleiber for the degree of Master of Science in Horticulture presented on June 6, 2013 Title: Comparison of Baits for Monitoring the Spotted Wing Drosophila, Drosophila suzukii Abstract approved: Denny J. Bruck Spotted wing Drosophila (SWD), Drosophila suzukii (Diptera: Drosophilidae), is a pest of small and stone fruits that is widely distributed across much of the United States, Canada, Europe and Asia. Unlike other members of the Drosophilidae that only lay eggs in overripe or rotting fruit, SWD infest ripening and ripe fruit. The female SWD has a serrated ovipositor that allows her to lay eggs under the skin of a wide range of fruits, where the eggs hatch into larvae and they consume the inside of the fruit. This feeding results in fruit collapse and deterioration, and the hole created by the oviposition puncture allows for secondary infection by microorganisms, yield losses, reduced fruit quality and degrades. The current control is to apply an insecticide treatment when the fruit begins to color and continue to keep the crop protected with chemical treatments until harvest is complete. The current monitoring tools are not sensitive enough to attract SWD at the critical time to establish economic thresholds, appropriately time treatments and allow growers to make good management decisions. The objective of this research project was to determine if a more sensitive attractant than the currently standard 5% acidity apple cider vinegar traps could be defined. A number of food products and commercially available lures were tested in greenhouse and field experiments for their attractiveness to D. -
The Evolution, Diversity, and Host Associations of Rhabdoviruses Ben Longdon,1,* Gemma G
Virus Evolution, 2015, 1(1): vev014 doi: 10.1093/ve/vev014 Research article The evolution, diversity, and host associations of rhabdoviruses Ben Longdon,1,* Gemma G. R. Murray,1 William J. Palmer,1 Jonathan P. Day,1 Darren J Parker,2,3 John J. Welch,1 Darren J. Obbard4 and Francis M. Jiggins1 1 2 Department of Genetics, University of Cambridge, Cambridge, CB2 3EH, School of Biology, University of Downloaded from St Andrews, St Andrews, KY19 9ST, UK, 3Department of Biological and Environmental Science, University of Jyva¨skyla¨, Jyva¨skyla¨, Finland and 4Institute of Evolutionary Biology, and Centre for Immunity Infection and Evolution, University of Edinburgh, Edinburgh, EH9 3JT, UK *Corresponding author: E-mail: [email protected] http://ve.oxfordjournals.org/ Abstract Metagenomic studies are leading to the discovery of a hidden diversity of RNA viruses. These new viruses are poorly characterized and new approaches are needed predict the host species these viruses pose a risk to. The rhabdoviruses are a diverse family of RNA viruses that includes important pathogens of humans, animals, and plants. We have discovered thirty-two new rhabdoviruses through a combination of our own RNA sequencing of insects and searching public sequence databases. Combining these with previously known sequences we reconstructed the phylogeny of 195 rhabdovirus by guest on December 14, 2015 sequences, and produced the most in depth analysis of the family to date. In most cases we know nothing about the biology of the viruses beyond the host they were identified from, but our dataset provides a powerful phylogenetic approach to predict which are vector-borne viruses and which are specific to vertebrates or arthropods. -
Drosophila Biology in the Genomic Age
Copyright Ó 2007 by the Genetics Society of America DOI: 10.1534/genetics.107.074112 Drosophila Biology in the Genomic Age Therese Ann Markow*,1 and Patrick M. O’Grady† *Department of Ecology and Evolutionary Biology, University of Arizona, Tucson, Arizona 85721 and †Division of Organisms and the Environment, University of California, Berkeley, California 94720 Manuscript received April 9, 2007 Accepted for publication May 10, 2007 ABSTRACT Over the course of the past century, flies in the family Drosophilidae have been important models for understanding genetic, developmental, cellular, ecological, and evolutionary processes. Full genome se- quences from a total of 12 species promise to extend this work by facilitating comparative studies of gene expression, of molecules such as proteins, of developmental mechanisms, and of ecological adaptation. Here we review basic biological and ecological information of the species whose genomes have recently been completely sequenced in the context of current research. F most biologists were given one wish to facilitate their several hundred taxa that await description. Most of I research, many would opt for the fully sequenced these taxa belong to one of two major subgenera: genome of their focal taxon. Others might ask for a Sophophora and Drosophila. Figure 1 shows the phylo- diverse array of genetic tools around which they could genetic relationships and divergence times of the 12 design experiments to answer evolutionary, developmen- species for which whole-genome sequences are now tal, behavioral, or ecological questions. With the recent available. The 12 species with sequenced genomes completion of full genome sequences from 12 species, represent a gradient of evolutionary distances from D. -
Terrestrial Insects and Climate Change: Adaptive Responses in Key Traits
Physiological Entomology (2019), DOI: 10.1111/phen.12282 Terrestrial insects and climate change: adaptive responses in key traits VANESSA KELLERMANN andBELINDA VAN HEERWAARDEN School of Biological Sciences, Monash University, Melbourne, Victoria, Australia Abstract. Understanding and predicting how adaptation will contribute to species’ resilience to climate change will be paramount to successfully managing biodiversity for conservation, agriculture, and human health-related purposes. Making predictions that capture how species will respond to climate change requires an understanding of how key traits and environmental drivers interact to shape fitness in a changing world. Current trait-based models suggest that low- to mid-latitude populations will be most at risk, although these models focus on upper thermal limits, which may not be the most important trait driving species’ distributions and fitness under climate change. In this review, we discuss how different traits (stress, fitness and phenology) might contribute and interact to shape insect responses to climate change. We examine the potential for adaptive genetic and plastic responses in these key traits and show that, although there is evidence of range shifts and trait changes, explicit consideration of what underpins these changes, be that genetic or plastic responses, is largely missing. Despite little empirical evidence for adaptive shifts, incorporating adaptation into models of climate change resilience is essential for predicting how species will respond under climate change. We are making some headway, although more data are needed, especially from taxonomic groups outside of Drosophila, and across diverse geographical regions. Climate change responses are likely to be complex, and such complexity will be difficult to capture in laboratory experiments. -
Drosophila Sexual Attractiveness in Older Males Is Mediated by Their Microbiota
Article Drosophila Sexual Attractiveness in Older Males Is Mediated by Their Microbiota Chloe Heys 1,2, Anne Lizé 1,3, Zenobia Lewis 4,* and Tom A. R. Price 1 1 Institute of Integrative Biology, University of Liverpool, Liverpool L69 7ZB, UK; [email protected] (C.H.); [email protected] (A.L.); [email protected] (T.A.R.P.) 2 Institute of Biodiversity, Animal Health & Comparative Medicine, University of Glasgow, Glasgow G12 8QQ, UK 3 UMR CNRS 6553, University of Rennes 1, 263 avenue du Général Leclerc, 35042 Rennes, France 4 School of Life Sciences, University of Liverpool, Liverpool L69 7ZB, UK * Correspondence: [email protected]; Tel.: +0151‐795‐4384 Received: 8 December 2019; Accepted: 22 January 2020; Published: 24 January 2020 Abstract: Age is well known to be a basis for female preference of males. However, the mechanisms underlying age‐based choices are not well understood, with several competing theories and little consensus. The idea that the microbiota can affect host mate choice is gaining traction, and in this study we examine whether the male microbiota influences female preference for older individuals in the fruit fly Drosophila pseudoobscura. We find that an intact microbiota is a key component of attractiveness in older males. However, we found no evidence that this decrease in older male attractiveness was simply due to impaired microbiota generally reducing male quality. Instead, we suggest that the microbiota underlies an honest signal used by females to assess male age, and that impaired microbiota disrupt this signal. This suggests that age‐based preferences may break down in environments where the microbiota is impaired, for example when individuals are exposed to naturally occurring antibiotics, extreme temperatures, or in animals reared in laboratories on antibiotic supplemented diet. -
The Discovery, Distribution and Diversity of DNA Viruses Associated with Drosophila Melanogaster in Europe
bioRxiv preprint doi: https://doi.org/10.1101/2020.10.16.342956; this version posted March 17, 2021. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. Title: The discovery, distribution and diversity of DNA viruses associated with Drosophila melanogaster in Europe Running title: DNA viruses of European Drosophila Key Words: DNA virus, Endogenous viral element, Drosophila, Nudivirus, Galbut virus, Filamentous virus, Adintovirus, Densovirus, Bidnavirus Authors: Megan A. Wallace 1,2 [email protected] 0000-0001-5367-420X Kelsey A. Coffman 3 [email protected] 0000-0002-7609-6286 Clément Gilbert 1,4 [email protected] 0000-0002-2131-7467 Sanjana Ravindran 2 [email protected] 0000-0003-0996-0262 Gregory F. Albery 5 [email protected] 0000-0001-6260-2662 Jessica Abbott 1,6 [email protected] 0000-0002-8743-2089 Eliza Argyridou 1,7 [email protected] 0000-0002-6890-4642 Paola Bellosta 1,8,9 [email protected] 0000-0003-1913-5661 Andrea J. Betancourt 1,10 [email protected] 0000-0001-9351-1413 Hervé Colinet 1,11 [email protected] 0000-0002-8806-3107 Katarina Eric 1,12 [email protected] 0000-0002-3456-2576 Amanda Glaser-Schmitt 1,7 [email protected] 0000-0002-1322-1000 Sonja Grath 1,7 [email protected] 0000-0003-3621-736X Mihailo Jelic 1,13 [email protected] 0000-0002-1637-0933 Maaria Kankare 1,14 [email protected] 0000-0003-1541-9050 Iryna Kozeretska 1,15 [email protected] 0000-0002-6485-1408 Volker Loeschcke 1,16 [email protected] 0000-0003-1450-0754 Catherine Montchamp-Moreau 1,4 [email protected] 0000-0002-5044-9709 Lino Ometto 1,17 [email protected] 0000-0002-2679-625X Banu Sebnem Onder 1,18 [email protected] 0000-0002-3003-248X Dorcas J. -
The Effects of Marking Methodology on Mate Choice in Drosophila Melanogaster
ABC 2020, 7(4):492-504 Animal Behavior and Cognition DOI: https://doi.org/10.26451/abc.07.04.02.2020 ©Attribution 3.0 Unported (CC BY 3.0) PREREGISTERED REPORT The Effects of Marking Methodology on Mate Choice in Drosophila melanogaster Eirlys E. Tysall1, Matilda Q. R. Pembury Smith1*, and R. Tucker Gilman2 1Faculty of Biology, Medicine, and Health, University of Manchester 2Faculty of Science and Engineering; University of Manchester *Corresponding author (Email: [email protected]) Citation – Tysall, E. E., Pembury Smith, M. Q. R., & Gilman, R. T. (2020). The effects of marking methodology on mate choice in Drosophila melanogaster. Animal Behavior and Cognition, 7(4), 492-504. doi: https://doi.org/10.26451/abc.07.04.02.2020 Note: This paper is the final report based on an accepted peer-reviewed preregistered submission that can be found here. Abstract – Mate choice is an important source of sexual selection and a key driver of evolutionary processes including adaptation and speciation. Drosophila species have become an important model system for studying mate choice in the lab. Mate choice experiments often require the marking of individual flies to make those flies identifiable to experimenters, and several marking methods have been developed. All of these methods have the potential to affect mating behavior, but the effects of different marking methods have not been systematically quantified and compared. In this experiment, we quantified and compared the effects of five marking methods commonly used for Drosophila melanogaster: wing clipping, applying paint to the thorax, applying marker pen to the wing, dusting flies with fluorescent powder, and dyeing flies by allowing them to ingest food coloring. -
1 Method to Obtain Homozygous Introgressing Segments in Drosophila to 2 Identify the Presence of Hybrid Sterility Genes of the Reproductive Isolation
Method to obtain homozygous introgressing segments in Drosophila to identify the presence of hybrid sterility genes of the reproductive isolation Francisco García-Franco ( [email protected] ) Universidad Autónoma Metropolitana https://orcid.org/0000-0002-3424-5271 Lilian Barandica-Cañon Universidad de Cartagena Ezel Galindo-Pérez Universidad Autónoma Metropolitana Martha Martínez García Universidad Nacional Autónoma de México Blanca Chávez-Sandoval Universidad Autónoma Metropolitana Biological Sciences - Article Keywords: Synmorphic Species, Polygenic Chromosome Asynapses, Bioinformatic Analysis, Crossing Strategies Posted Date: November 19th, 2020 DOI: https://doi.org/10.21203/rs.3.rs-110613/v1 License: This work is licensed under a Creative Commons Attribution 4.0 International License. Read Full License 1 1 Method to obtain homozygous introgressing segments in Drosophila to 2 identify the presence of hybrid sterility genes of the reproductive isolation 3 Corresponding authors: *[email protected] and *[email protected] 4 ABSTRACT 5 Here, we present for the first time, a method to generate homozygous segmental 6 introgressions, by means of crosses between a pair of synmorphic species. The 7 introgressions were monitored by the cytogenetic method of polygenic chromosome 8 asynapses. Later the introgressions were evaluated in their capacity to produce sterility 9 in segmental males. Also, the smallest segment with the capacity to produce sterility in 10 segmental males was mapped by in situ hybridization of polythene chromosomes, using 11 8 sequences of BACs clones as probes. Finally, a bioinformatic analysis was carried out 12 to identify the presence of particular genes. From 2 parental strains, D. buzzatii and D. 13 koepferae, 6 simple segmental hybrid lines were generated, whose introgressing 14 segments are distributed along chromosome 4 of these species. -
Original Article Pupal Emergence Pattern in Cactophilic Drosophila
Running title: Host related pupal emergence in cactophilic flies Title for authors: E. M. Soto et al. Correspondence: Ignacio Soto. Intendente Güiraldes 2160. Ciudad Universitaria, Pabellón II. (C1428EHA). Buenos Aires. Argentina. Tel: +54 11 4576 3348; Fax: +54 11 4576 3354. e-mail: [email protected] Original article Pupal emergence pattern in cactophilic Drosophila and the effect of host plants Eduardo M. Soto, Julián Padró, Pablo Milla Carmona, Diego T. Tuero, Valeria P. Carreira and Ignacio M. Soto Departamento de Ecología Genética y Evolución. Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires. IEGEBA-CONICET. Buenos Aires. Argentina. This is an Accepted Article that has been peer-reviewed and approved for publication in the Insect Science but has yet to undergo copy-editing and proof correction. Please cite this article as doi: 10.1111/1744-7917.12484. This article is protected by copyright. All rights reserved. Abstract Drosophila buzzatii and D. koepferae are sibling cactophilic species. The former breeds primarily on prickly pears (genus Opuntia) whereas the latter breeds on columnar cacti of the genera Cereus and Trichocereus, although with certain degree of niche overlapping. We examined the interspecific differences in diurnal temporal patterns of adult emergence from puparia and evaluated whether this behavior is affected by rearing in the different cactus hosts available in nature. We detected important host-dependent genetic variation for this trait differentially affecting the emergence schedule of these species. Diurnal pattern of emergence time was directly correlated with developmental time and negatively correlated with adult wing size, suggesting that early emergences are at least indirectly correlated with increased fitness. -
The Speciation History of Drosophila Pseudoobscura and Close
Copyright 0 1996 by the Genetics Society of America The Speciation history ofDrosophila Pseudoobscura and Close Relatives: Inferences from DNA Sequence Variation at the Period Locus Rong-Lin Wang' and Jody Hey Department of Biological Sciences, Rutgers University, Piscataway, NewJersey 08855-1 059 Manuscript received June 3, 1996 Accepted for publication August 3, 1996 ABSTRACT Thirty-five period locus sequences from Drosophila pseudoobscura and its siblings species, D. p. bogotana, D. persirnilis, and D.rniranda, were studied. A largeamount of variation was found within D. pseudoobscura and D.persirnilis, consistent with histories of large effective population sizes. D. p. bogotana, however, has a severe reduction in diversity. Combined analysis of perwith two other loci, in both D.p. bogotana and D. pseudoobscura, strongly suggest this reduction is due to recent directional selection at or near per within D.p. bogotana. Since D. p. bogotana is highly variable and shares variation with D.pseudoobscura at other loci, the low level of variation at perwithin D. p. bogotana can not be explained by a small effective population size or by speciation via founder event. Both D. pseudoobscura and D. persirnilis have consider- able intraspecific gene flow. A large portion of one D.persirnilis sequence appears to have arisen via introgression from D. pseudoobscura. The time of this event appears to be well after the initial separation of these two species. The estimated times since speciation are one mya for D. pseudoobscura and D. persirnilis and 2 mya since the formation of D. miranda. VOLUTIONARY biologists areconcerned with One of the best studied species groups includes Dro- E both the population genetic mechanisms behind sophila pseudoobscura and its close relatives:D. -
Behavioral Evolution Accompanying Host Shifts in Cactophilic Drosophila Larvae
Behavioral evolution accompanying host shifts in cactophilic Drosophila larvae Item Type Article Authors Coleman, Joshua M.; Benowitz, Kyle M.; Jost, Alexandra G.; Matzkin, Luciano M. Citation Coleman JM, Benowitz KM, Jost AG, Matzkin LM. Behavioral evolution accompanying host shifts in cactophilic Drosophila larvae. Ecol Evol. 2018;8:6921–6931. https://doi.org/10.1002/ ece3.4209 DOI 10.1002/ece3.4209 Publisher WILEY Journal ECOLOGY AND EVOLUTION Rights © 2018 The Authors. Ecology and Evolution published by John Wiley & Sons Ltd. This is an open access article under the terms of the Creative Commons Attribution License. Download date 05/10/2021 08:39:04 Item License https://creativecommons.org/licenses/by/4.0/ Version Final published version Link to Item http://hdl.handle.net/10150/631224 Received: 2 March 2018 | Revised: 16 April 2018 | Accepted: 17 April 2018 DOI: 10.1002/ece3.4209 ORIGINAL RESEARCH Behavioral evolution accompanying host shifts in cactophilic Drosophila larvae Joshua M. Coleman1,2 | Kyle M. Benowitz1 | Alexandra G. Jost2 | Luciano M. Matzkin1,3,4 1Department of Entomology, University of Arizona, Tucson, Arizona Abstract 2Department of Biological For plant utilizing insects, the shift to a novel host is generally accompanied by a Sciences, University of Alabama in complex set of phenotypic adaptations. Many such adaptations arise in response to Huntsville, Huntsville, Alabama differences in plant chemistry, competitive environment, or abiotic conditions. One 3BIO5 Institute, University of Arizona, Tucson, Arizona less well- understood factor in the evolution of phytophagous insects is the selective 4Department of Ecology and Evolutionary environment provided by plant shape and volume. Does the physical structure of a Biology, University of Arizona, Tucson, Arizona new plant host favor certain phenotypes? Here, we use cactophilic Drosophila, which have colonized the necrotic tissues of cacti with dramatically different shapes and Correspondence Luciano M.