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"National List of Vascular Plant Species That Occur in Wetlands: 1996 National Summary."
Intro 1996 National List of Vascular Plant Species That Occur in Wetlands The Fish and Wildlife Service has prepared a National List of Vascular Plant Species That Occur in Wetlands: 1996 National Summary (1996 National List). The 1996 National List is a draft revision of the National List of Plant Species That Occur in Wetlands: 1988 National Summary (Reed 1988) (1988 National List). The 1996 National List is provided to encourage additional public review and comments on the draft regional wetland indicator assignments. The 1996 National List reflects a significant amount of new information that has become available since 1988 on the wetland affinity of vascular plants. This new information has resulted from the extensive use of the 1988 National List in the field by individuals involved in wetland and other resource inventories, wetland identification and delineation, and wetland research. Interim Regional Interagency Review Panel (Regional Panel) changes in indicator status as well as additions and deletions to the 1988 National List were documented in Regional supplements. The National List was originally developed as an appendix to the Classification of Wetlands and Deepwater Habitats of the United States (Cowardin et al.1979) to aid in the consistent application of this classification system for wetlands in the field.. The 1996 National List also was developed to aid in determining the presence of hydrophytic vegetation in the Clean Water Act Section 404 wetland regulatory program and in the implementation of the swampbuster provisions of the Food Security Act. While not required by law or regulation, the Fish and Wildlife Service is making the 1996 National List available for review and comment. -
Outline of Angiosperm Phylogeny
Outline of angiosperm phylogeny: orders, families, and representative genera with emphasis on Oregon native plants Priscilla Spears December 2013 The following listing gives an introduction to the phylogenetic classification of the flowering plants that has emerged in recent decades, and which is based on nucleic acid sequences as well as morphological and developmental data. This listing emphasizes temperate families of the Northern Hemisphere and is meant as an overview with examples of Oregon native plants. It includes many exotic genera that are grown in Oregon as ornamentals plus other plants of interest worldwide. The genera that are Oregon natives are printed in a blue font. Genera that are exotics are shown in black, however genera in blue may also contain non-native species. Names separated by a slash are alternatives or else the nomenclature is in flux. When several genera have the same common name, the names are separated by commas. The order of the family names is from the linear listing of families in the APG III report. For further information, see the references on the last page. Basal Angiosperms (ANITA grade) Amborellales Amborellaceae, sole family, the earliest branch of flowering plants, a shrub native to New Caledonia – Amborella Nymphaeales Hydatellaceae – aquatics from Australasia, previously classified as a grass Cabombaceae (water shield – Brasenia, fanwort – Cabomba) Nymphaeaceae (water lilies – Nymphaea; pond lilies – Nuphar) Austrobaileyales Schisandraceae (wild sarsaparilla, star vine – Schisandra; Japanese -
Permanent Draft Genome Sequence of Frankia Sp. NRRL B-16219 Reveals
Ktari et al. Standards in Genomic Sciences (2017) 12:51 DOI 10.1186/s40793-017-0261-3 EXTENDEDGENOMEREPORT Open Access Permanent draft genome sequence of Frankia sp. NRRL B-16219 reveals the presence of canonical nod genes, which are highly homologous to those detected in Candidatus Frankia Dg1 genome Amir Ktari1, Imen Nouioui1, Teal Furnholm2, Erik Swanson2, Faten Ghodhbane-Gtari1, Louis S. Tisa2 and Maher Gtari1* Abstract Frankia sp. NRRL B-16219 was directly isolated from a soil sample obtained from the rhizosphere of Ceanothus jepsonii growing in the USA. Its host plant range includes members of Elaeagnaceae species. Phylogenetically, strain NRRL B-16219 is closely related to “Frankia discariae” with a 16S rRNA gene similarity of 99.78%. Because of the lack of genetic tools for Frankia, our understanding of the bacterial signals involved during the plant infection process and the development of actinorhizal root nodules is very limited. Since the first three Frankia genomes were sequenced, additional genome sequences covering more diverse strains have helped provide insight into the depth of the pangenome and attempts to identify bacterial signaling molecules like the rhizobial canonical nod genes. The genome sequence of Frankia sp. strain NRRL B-16219 was generated and assembled into 289 contigs containing 8,032,739 bp with 71.7% GC content. Annotation of the genome identified 6211 protein-coding genes, 561 pseudogenes, 1758 hypothetical proteins and 53 RNA genes including 4 rRNA genes. The NRRL B-16219 draft genome contained genes homologous to the rhizobial common nodulation genes clustered in two areas. The first cluster contains nodACIJH genes whereas the second has nodAB and nodH genes in the upstream region. -
Introduction to Common Native & Invasive Freshwater Plants in Alaska
Introduction to Common Native & Potential Invasive Freshwater Plants in Alaska Cover photographs by (top to bottom, left to right): Tara Chestnut/Hannah E. Anderson, Jamie Fenneman, Vanessa Morgan, Dana Visalli, Jamie Fenneman, Lynda K. Moore and Denny Lassuy. Introduction to Common Native & Potential Invasive Freshwater Plants in Alaska This document is based on An Aquatic Plant Identification Manual for Washington’s Freshwater Plants, which was modified with permission from the Washington State Department of Ecology, by the Center for Lakes and Reservoirs at Portland State University for Alaska Department of Fish and Game US Fish & Wildlife Service - Coastal Program US Fish & Wildlife Service - Aquatic Invasive Species Program December 2009 TABLE OF CONTENTS TABLE OF CONTENTS Acknowledgments ............................................................................ x Introduction Overview ............................................................................. xvi How to Use This Manual .................................................... xvi Categories of Special Interest Imperiled, Rare and Uncommon Aquatic Species ..................... xx Indigenous Peoples Use of Aquatic Plants .............................. xxi Invasive Aquatic Plants Impacts ................................................................................. xxi Vectors ................................................................................. xxii Prevention Tips .................................................... xxii Early Detection and Reporting -
Production, Pomological and Nutraceutical Properties of Apricot
1 Production, pomological and nutraceutical properties of apricot Khaled Moustafa1* and Joanna Cross2 1Editor of ArabiXiv (arabixiv.org), Paris, France 2Nigde Omer Halisdemir University, Nigde, Turkey Correspondence: [email protected] Abstract Apricot (Prunus sp.) is an important fruit crop worldwide. Despite recent advances in apricot research, much is still to be done to improve its productivity and environmental adaptability. The availability of wild apricot germplasms with economically interesting traits is a strong incentive to increase research panels toward improving its economic, environmental and nutritional characteristics. New technologies and genomic studies have generated a large amount of raw data that the mining and exploitation can help decrypt the biology of apricot and enhance its agronomic values. Here, we outline recent findings in relation to apricot production, pomological and nutraceutical properties. In particular, we retrace its origin from central Asia and the path it took to attain Europe and other production areas around the Mediterranean basin while locating it in the rosaceae family and referring to its genetic diversities and new attempts of classification. The production, nutritional, and nutraceutical importance of apricot are recapped in an easy readable and comparable way. We also highlight and discuss the effects of late frost damages on apricot production over different growth stages, from swollen buds to green fruits formation. Issues related to the length of production season and biotic and abiotic environmental challenges are also discussed with future perspective on how to lengthen the production season without compromising the fruit quality and productivity. Keywords Apricot kernel oil, plum pox virus, prunus armeniaca, spring frost, stone fruit, sharka. -
Phylogeny of Maleae (Rosaceae) Based on Multiple Chloroplast Regions: Implications to Genera Circumscription
Hindawi BioMed Research International Volume 2018, Article ID 7627191, 10 pages https://doi.org/10.1155/2018/7627191 Research Article Phylogeny of Maleae (Rosaceae) Based on Multiple Chloroplast Regions: Implications to Genera Circumscription Jiahui Sun ,1,2 Shuo Shi ,1,2,3 Jinlu Li,1,4 Jing Yu,1 Ling Wang,4 Xueying Yang,5 Ling Guo ,6 and Shiliang Zhou 1,2 1 State Key Laboratory of Systematic and Evolutionary Botany, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China 2University of the Chinese Academy of Sciences, Beijing 100043, China 3College of Life Science, Hebei Normal University, Shijiazhuang 050024, China 4Te Department of Landscape Architecture, Northeast Forestry University, Harbin 150040, China 5Key Laboratory of Forensic Genetics, Institute of Forensic Science, Ministry of Public Security, Beijing 100038, China 6Beijing Botanical Garden, Beijing 100093, China Correspondence should be addressed to Ling Guo; [email protected] and Shiliang Zhou; [email protected] Received 21 September 2017; Revised 11 December 2017; Accepted 2 January 2018; Published 19 March 2018 Academic Editor: Fengjie Sun Copyright © 2018 Jiahui Sun et al. Tis is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. Maleae consists of economically and ecologically important plants. However, there are considerable disputes on generic circumscription due to the lack of a reliable phylogeny at generic level. In this study, molecular phylogeny of 35 generally accepted genera in Maleae is established using 15 chloroplast regions. Gillenia isthemostbasalcladeofMaleae,followedbyKageneckia + Lindleya, Vauquelinia, and a typical radiation clade, the core Maleae, suggesting that the proposal of four subtribes is reasonable. -
Comparative Analysis of the Complete Chloroplast Genome Sequences of Three Closely Related East-Asian Wild Roses (Rosa Sect
G C A T T A C G G C A T genes Article Comparative Analysis of the Complete Chloroplast Genome Sequences of Three Closely Related East-Asian Wild Roses (Rosa sect. Synstylae; Rosaceae) Ji-Hyeon Jeon and Seung-Chul Kim * Department of Biological Sciences, Sungkyunkwan University, Suwon 16419, Korea; [email protected] * Correspondence: [email protected]; Tel.: +82-31-299-4499 Received: 4 November 2018; Accepted: 27 December 2018; Published: 3 January 2019 Abstract: Species belonging to Rosa section Synstylae (Rosaceae) are mainly distributed in East Asia, and represent recently diverged lineages within the genus. Over decades, inferring phylogenetic relationships within section Synstylae have been exceptional challenges, due to short branch lengths and low support values. Of approximately 36 species in the section Synstylae, Rosa multiflora, Rosa luciae and Rosa maximowicziana are widely distributed in the Sino-Japanese floristic region. In this study, we assembled chloroplast genomes of these three species to compare the genomic features within section Synstylae, and to compare with other infrageneric groups. We found that three Rosa sect. Synstylae species had lost infA genes with pseudogenization, and they were almost identical to each other. Two protein-coding gene regions (ndhF and ycf1) and five non-coding regions (5’matK-trnK, psbI-trnS-trnG, rps16-trnG, rpoB-trnC, and rps4-trnT) were identified as being highly informative markers. Within three section Synstylae chloroplast genomes, 85 simple sequence repeat (SSR) motifs were detected, of which at least 13 motifs were identified to be effective markers. The phylogenetic relationships of R. multiflora, R. luciae and R. maximowicziana could not be resolved, even with chloroplast genome-wide data. -
Rosa Canina Linnaeus Common Names: Dog Rose, Dog Brier, Wild Rose (5,6,13)
Rosa canina Linnaeus Common Names: Dog rose, dog brier, wild rose (5,6,13). Etymology: ‘Rosa’ is the Latin word for ‘rose’, and ‘canina’ in Latin means ‘of a dog’ or ‘mean’ (1,3). Botanical synonyms: Rosa corymbifera Borkh., R. dumetorum Thuill., and R. ciliatosepala Blocki (2,6). FAMILY: Rosaceae, the rose family (1) Quick Notable Features: ¬ Alternate, odd-pinnately compound, serrate leaves ¬ Conspicuous stipules, fused to petiole ¬ Showy white/pink flowers with many stamens and pistils in a hypanthium ¬ Bright red hips with no sepals Plant Height: R. canina grows up to 3m tall (10). Subspecies/varieties recognized (6,7): Rosa canina var. dumetorum (Thuill.) Poir., Rosa canina var. canina L., Rosa canina var. corymbifera Rouy, Rosa canina var. andegavensis Arechav., Rosa canina var. evanida (Christ) P.V.Heath, Rosa canina var. frutetorum (Besser) P.V.Heath, Rosa canina var. libertiae (Dumort.) P.V.Heath, Rosa canina var. Montana (Vill.) P.V.Heath, Rosa canina var. sepium Arechav., Rosa canina var. subcanina (Christ) P.V.Heath, Rosa canina subsp. andegavensis (Bastard) Vigo, Rosa canina subsp. virens (Wahlenb.) Šmite. Most Likely Confused with: Rosa eglanteria, R. micrantha, R. setigera, R multiflora, and Rubus ssp. (1,9). Habitat Preference: The species is found in open, disturbed habitats such as roadsides, old pastures, fields, dry banks, and thickets. R. canina requires at least partial sun, and high levels of soil moisture (1,5,9,10). Geographic Distribution in Michigan: The species grows in six counties of the lower peninsula: Benzie, Hillsdale, Kent, Leelanau, Lenawee, and Wayne (2,19). Known Elevational Distribution: In Turkey, R. -
Draft Plant Propagation Protocol
Plant Propagation Protocol for Dasiphora fruticosa ESRM 412 – Native Plant Production Protocol URL: https://courses.washington.edu/esrm412/protocols/DAFR.pdf Figure 1: Distribution in North America7 Figure 2: Distribution in Washington State7 TAXONOMY7,8 Plant Family Scientific Rosaceae Name Common Name Rose family Species Scientific Name Scientific Dasiphora fruticosa (L.) Rydb. Name Varieties Sub-species Dasiphora fruticosa (L.) Rydb. subsp. fruticosa Dasiphora fruticosa (L.) Rydb. ssp. floribunda (Pursh) Kartesz Cultivar Dozens of cultivars have been created for variations in flower shape and color, foliage appearance, and shrub form.9 Common Dasiphora floribunda (Pursh) Raf. Synonym(s) Potentilla fruticosa L. Common Shrubby cinquefoil, bush cinquefoil, golden hardhack, widdy Name(s) Species Code DAFR6 (as per USDA Plants database) GENERAL INFORMATION Geographical North America (Canada and United States), Europe, Asia.9,10 See maps above range for detailed distribution in N. America and Washington State.7 Ecological Mid to high-elevation meadows, rocky slopes, open forest, riparian areas and distribution swamps.3,11 Climate and Temperate and subarctic.9,11 elevation range Local habitat Locally found in Washington counties bordering the Cascades, the Olympic and peninsula, and in the northeast bordering Idaho.7 abundance Commonly associated in the wild with Carex, Penstemon, Elymus, and Potentilla species.3 Plant strategy Colonizer, early seral species.12 type / successional stage Plant Perennial shrub able to withstand harsh environmental conditions, including characteristic cold temperatures, strong wind, full sun, and drought.5,9,11 Can tolerate a wide s pH range.11 Adapted to grow in a range of soil conditions, including variable texture and calcareous soils, but grows best in sandy and loamy soil.5,9 This short slow-growing rounded shrub can grow up to 1m tall and 1m wide with numerous small, narrowly oblong green leaves3,9. -
Pala Park Habitat Assessment
Pala Park Bank Stabilization Project: Geotechnical Exploration TABLE OF CONTENTS SECTION 1.0 COUNTY OF RIVERSIDE ATTACHMENTS Biological Report Summary Report (Attachment E-3) Level of Significance Checklist (Attachment E-4) Biological Resources Map (Attachment E-5) Site Photographs (Attachment E-6) SECTION 2.0 HABITAT ASSESSMENT General Site Information ............................................................................................................... 1 Methods ........................................................................................................................................ 2 Existing Conditions ....................................................................................................................... 4 Special Status Resources ............................................................................................................. 8 Other Issues ................................................................................................................................ 14 Recommendations ...................................................................................................................... 14 References .................................................................................................................................. 16 LIST OF TABLES Page 1 Special Status Plant Species Known to Occur in the Vicinity of the Survey Area ........... 10 2 Chaparral Sand-Verbena Populations Observed in the Survey Area ............................. 12 3 Paniculate Tarplant -
San Bruno Mountain Habitat Conservation Plan Year
SAN BRUNO MOUNTAIN HABITAT CONSERVATION PLAN YEAR 2019-20 ACTIVITIES REPORT FOR FEDERALLY LISTED SPECIES Endangered Species 10(a)(1)(B) Permit TE215574-6 Prepared By: Evan Cole San Mateo County Parks Department 455 County Center, 4th Floor Redwood City, CA 94063 December 2020 TABLE OF CONTENTS Table of Contents I. INTRODUCTION ..............................................................................................................7 A. Covered Species Population Status ................................................................................... 7 2019 MISSION BLUE STATUS ......................................................................................................................... 8 2020 CALLIPPE SILVERSPOT STATUS.............................................................................................................. 8 2020 SAN BRUNO ELFIN STATUS ................................................................................................................... 9 RARE PLANT STATUS ..................................................................................................................................... 9 II. STATUS OF SPECIES OF CONCERN .........................................................................9 A. Mission Blue Butterfly (Icaricia icarioides missionensis) .............................................. 9 METHODOLOGY .......................................................................................................................................... 10 RESULTS ..................................................................................................................................................... -
Influence of Silvicultural Treatment, Site Characteristics, and Land Use
The University of Maine DigitalCommons@UMaine Electronic Theses and Dissertations Fogler Library 8-2009 Influence of Silvicultural Treatment, Site Characteristics, and Land Use History on Native and Nonnative Forest Understory Plant Composition on the Penobscot Experimental Forest in Maine Elizabeth Bryce Follow this and additional works at: http://digitalcommons.library.umaine.edu/etd Part of the Forest Biology Commons, Forest Management Commons, Plant Sciences Commons, and the Terrestrial and Aquatic Ecology Commons Recommended Citation Bryce, Elizabeth, "Influence of Silvicultural Treatment, Site Characteristics, and Land Use History on Native and Nonnative Forest Understory Plant Composition on the Penobscot Experimental Forest in Maine" (2009). Electronic Theses and Dissertations. 362. http://digitalcommons.library.umaine.edu/etd/362 This Open-Access Thesis is brought to you for free and open access by DigitalCommons@UMaine. It has been accepted for inclusion in Electronic Theses and Dissertations by an authorized administrator of DigitalCommons@UMaine. INFLUENCE OF SILVICULTURAL TREATMENT, SITE CHARACTERISTICS, AND LAND USE HISTORY ON NATIVE AND NONNATIVE FOREST UNDERSTORY PLANT COMPOSITION ON THE PENOBSCOT EXPERIMENTAL FOREST IN MAINE By Elizabeth Bryce B.S. Temple University, 2003 A THESIS Submitted in Partial Fulfillment of the Requirements for the Degree of Master of Science (in Ecology and Environmental Science) The Graduate School The University of Maine August, 2009 Advisory Committee: Laura S. Kenefic, Research Forester, U.S. Forest Service, Northern Research Station, and Faculty Associate, School of Forest Resources, Advisor Alison C. Dibble, Adjunct Faculty, Department of Biology and Ecology John C. Brissette, Research Forester and Project Leader, U.S. Forest Service, Northern Research Station William H.