Poly(Amidoamine) Dendrimers: Covalent and Supramolecular Synthesis Z
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Organization of Hybrid Dendrimer-Inorganic Nanoparticles on Amphiphilic Surfaces
4852 Macromolecules 2002, 35, 4852-4854 Organization of Hybrid Dendrimer-Inorganic Nanoparticles on Amphiphilic Surfaces Franziska Gro1hn,‡ Xiaohong Gu,† Holger Gru1 ll,§ J. Carson Meredith,⊥ Giovanni Nisato,§ Barry J. Bauer, Alamgir Karim,* and Eric J. Amis* Polymers Division and Building Materials Division, National Institute of Standards and Technology, Gaithersburg, Maryland 20899 Received October 16, 2001 Figure 1. Dendrimer-nanocluster building block: the G8 Introduction. Multiple length scale structuring of PAMAM dendrimers of 11 nm diameter include gold colloids organic-inorganic composites is a powerful technique of 3.2 nm diameter. Shown is a TEM micrograph in which the for the creation of materials and devices. Because of (stained) dendrimer appears gray and the gold appears black as well as a cartoon of the structure derived from TEM, SAXS, quantum size effects, nanoscale inorganic structures can and SANS. For details see ref 16. show special electronic, optical, optoelectronic, and magnetic behavior.1,2 To take advantage of these unique crometer length scale features. In addition to the properties, one has to be able to design such nanostruc- potential for building mesoscale materials, we also tures in a controlled manner and to organize the address the application of these stable nanoparticle nanoparticles on larger length scales. The design of components as markers for chemical and physical materials structured on multiple length scales from the labeling of other mesostructures. molecular to the macroscopic level has recently come Self-Assembly on Self-Assembled Monolayer Sub- into focus as modular chemistry. As with the develop- strates. We study the deposition of gold-containing ment of any new materials, a parallel requirement is dendrimers on stripe-patterned self-assembled mono- the need for appropriate measurement methods to layer (SAM) substrates. -
Last Decade of Unconventional Methodologies for the Synthesis Of
Review molecules Last Decade of Unconventional Methodologies for theReview Synthesis of Substituted Benzofurans Last Decade of Unconventional Methodologies for the Lucia Chiummiento *, Rosarita D’Orsi, Maria Funicello and Paolo Lupattelli Synthesis of Substituted Benzofurans Department of Science, Via dell’Ateneo Lucano, 10, 85100 Potenza, Italy; [email protected] (R.D.); [email protected] (M.F.); [email protected] (P.L.) Lucia Chiummiento * , Rosarita D’Orsi, Maria Funicello and Paolo Lupattelli * Correspondence: [email protected] Department of Science, Via dell’Ateneo Lucano, 10, 85100 Potenza, Italy; [email protected] (R.D.); Academic Editor: Gianfranco Favi [email protected] (M.F.); [email protected] (P.L.) Received:* Correspondence: 22 April 2020; [email protected] Accepted: 13 May 2020; Published: 16 May 2020 Abstract:Academic This Editor: review Gianfranco describes Favi the progress of the last decade on the synthesis of substituted Received: 22 April 2020; Accepted: 13 May 2020; Published: 16 May 2020 benzofurans, which are useful scaffolds for the synthesis of numerous natural products and pharmaceuticals.Abstract: This In review particular, describes new the intramolecular progress of the and last decadeintermolecular on the synthesis C–C and/or of substituted C–O bond- formingbenzofurans, processes, which with aretransition-metal useful scaffolds catalysi for thes or synthesis metal-free of numerous are summarized. natural products(1) Introduction. and (2) Ringpharmaceuticals. generation via In particular, intramolecular new intramolecular cyclization. and (2.1) intermolecular C7a–O bond C–C formation: and/or C–O (route bond-forming a). (2.2) O– C2 bondprocesses, formation: with transition-metal (route b). -
Peptide Synthesis: Chemical Or Enzymatic
Electronic Journal of Biotechnology ISSN: 0717-3458 Vol.10 No.2, Issue of April 15, 2007 © 2007 by Pontificia Universidad Católica de Valparaíso -- Chile Received June 6, 2006 / Accepted November 28, 2006 DOI: 10.2225/vol10-issue2-fulltext-13 REVIEW ARTICLE Peptide synthesis: chemical or enzymatic Fanny Guzmán Instituto de Biología Pontificia Universidad Católica de Valparaíso Avenida Brasil 2950 Valparaíso, Chile Fax: 56 32 212746 E-mail: [email protected] Sonia Barberis Facultad de Química, Bioquímica y Farmacia Universidad Nacional de San Luis Ejército de los Andes 950 (5700) San Luis, Argentina E-mail: [email protected] Andrés Illanes* Escuela de Ingeniería Bioquímica Pontificia Universidad Católica de Valparaíso Avenida Brasil 2147 Fax: 56 32 2273803 E-mail: [email protected] Financial support: This work was done within the framework of Project CYTED IV.22 Industrial Application of Proteolytic Enzymes from Higher Plants. Keywords: enzymatic synthesis, peptides, proteases, solid-phase synthesis. Abbreviations: CD: circular dichroism CLEC: cross linked enzyme crystals DDC: double dimer constructs ESI: electrospray ionization HOBT: hydroxybenzotriazole HPLC: high performance liquid hromatography KCS: kinetically controlled synthesis MALDI: matrix-assisted laser desorption ionization MAP: multiple antigen peptide system MS: mass spectrometry NMR: nuclear magnetic resonance SPS: solution phase synthesis SPPS: solid-phase peptide synthesis t-Boc: tert-butoxycarbonyl TCS: thermodynamically controlled synthesis TFA: trifluoroacetic acid Peptides are molecules of paramount importance in the medium, biocatalyst and substrate engineering, and fields of health care and nutrition. Several technologies recent advances and challenges in the field are analyzed. for their production are now available, among which Even though chemical synthesis is the most mature chemical and enzymatic synthesis are especially technology for peptide synthesis, lack of specificity and relevant. -
Multiscale Modeling for Host-Guest Chemistry of Dendrimers in Solution
Polymers 2012, 4, 463-485; doi:10.3390/polym4010463 OPEN ACCESS polymers ISSN 2073-4360 www.mdpi.com/journal/polymers Review Multiscale Modeling for Host-Guest Chemistry of Dendrimers in Solution Seung Ha Kim and Monica H. Lamm ? Department of Chemical and Biological Engineering, Iowa State University, Ames, IA 50011, USA ? Author to whom correspondence should be addressed; E-Mail: [email protected]; Tel.: 515-294-6533; Fax: 515-294-2689. Received: 15 December 2011; in revised form: 31 January 2012 / Accepted: 6 February 2012 / Published: 10 February 2012 Abstract: Dendrimers have been widely used as nanostructured carriers for guest species in a variety of applications in medicine, catalysis, and environmental remediation. Theory and simulation methods are an important complement to experimental approaches that are designed to develop a fundamental understanding about how dendrimers interact with guest molecules. This review focuses on computational studies aimed at providing a better understanding of the relevant physicochemical parameters at play in the binding and release mechanisms between polyamidoamine (PAMAM) dendrimers and guest species. We highlight recent contributions that model supramolecular dendrimer-guest complexes over the temporal and spatial scales spanned by simulation methods ranging from all-atom molecular dynamics to statistical field theory. The role of solvent effects on dendrimer-guest interactions and the importance of relating model parameters across multiple scales is discussed. Keywords: multiscale modeling; dendrimer simulations; host-guest chemistry 1. Introduction Dendrimers have received increasing attention over the past several decades as attractive candidate materials for a variety of applications such as therapeutic delivery systems [1–5], imaging agents [4,6,7], templates for catalytic metal nanoparticles [8–10], and extraction agents for the removal of organic pollutants and toxic metals from water and soil [11–14]. -
M.Sc. Organic Chemistry
ST. JOSEPH’S COLLEGE (AUTONOMOUS) BENGALURU-27 DEPARTMENT OF CHEMISTRY SYLLABUS FOR POSTGRADUATE COURSE IN ORGANIC CHEMISTRY 2019-21 Re-accredited with ‘A++’ GRADE and 3.79/4 CGPA by NAAC Recognised as “College of Excellence” by UGC The Postgraduate programme in chemistry is designed to give students a good foundation in Chemistry and develop in them problem solving and experimental skills so that they are well prepared for further studies in specialized areas of Chemistry or for employment in academic institutions and in industry. Mission statement: To promote among our learners the skills of thinking, experimentation and application of the knowledge gained. To promote concern for environment and to develop appreciation for green Chemistry. To prepare our students for life in the larger community. Benchmark Statements for the Course: To instil in students a sense of enthusiasm for chemistry, an appreciation of its application in different contexts, and to involve them in intellectually stimulating and satisfying experience of learning and studying. To provide students with a broad and balanced foundation of chemical knowledge and practical skills. Teaching-Learning: Although the lecture method is extensively used, the students are also encouraged to do self- study through other activities like assignments, seminars, quiz, viva-voce etc. Co-curricular Activities: The Chemical Society for postgraduate (P.G.) students provides them with a platform to interact with students of other institutions and also with eminent scientists from -
Polyphenylene Dendrimers
Polyphenylene Dendrimers - Design and Synthesis of Monodisperse Functional Nanoparticles Dissertation zur Erlangung des Grades "Doktor der Wissenschaften" am Fachbereich Chemie und Pharmazie der Johannes Gutenberg-Universität in Mainz vorgelegt von Stefan Bernhardt geb. in Hofheim a. Ts. Mainz 2005 Dekan: Herr Prof. Dr. P. Langguth 1. Berichterstatter: 2. Berichterstatter: Tag der mündlichen Prüfung: 26.06.2006 Die vorliegende Arbeit wurde in der Zeit von März 2002 bis März 2005 am Max-Planck- Institut für Polymerforschung in Mainz unter Anleitung von Herrn Prof. Dr. K. Müllen durchgeführt. Dedicated to my wife If we knew what we were doing it wouldn't be research. Einstein, Albert Index of Abbreviations: AFM atomic force microscopy Anal. analysis calcd. calculated TBAF tetrabutylammoniumfluoride-hexahydrate CD2Cl2 deuterated methylenechloride δ chemical shift / ppm d doublet d8THF deuterated tetrahydrofuran DEE diethylether DMF dimethylformamide DMSO dimethylsulfoxide eq. equivalent EtOH ethanol FD field desorption G1, G2, G3, first-, second-, and third-dendrimer generation GS ground state h hours J coupling constant / Hz LE locally-excited state m multiplett m / g weight in gram MALDI-TOF matrix-assisted laser desorption/ionization-time of flight MCH methylcyclohexane MeOH methanol MS mass spectrometry n refractive index NMR nuclear magnetic resonance PE petroleum ether, low boiling PMI perylene monoimide PPh3 triphenylphosphine ppm parts per million (chemical shift in NMR spectroscopy) RT room temperature s singulet SM single molecule T temperature / °K or °C t triplet TCSPC time-correlated single photon counting TEA triethylamine THF tetrahydrofuran TIPS tri-iso-propylsilyl TPA triphenylamine UV ultraviolett Фflu fluorescence quantum yield τflu decay time of fluorescence kfwd and krev forward and reverse electron transfer rate constants CS charge-separated state Table of contents 1 INTRODUCTION................................................................................................ -
Enantioselective Synthesis of (-)-Vallesine: Late- Stage C17-Oxidation Via Complex Indole Boronation
Enantioselective synthesis of (-)-vallesine: late- stage C17-oxidation via complex indole boronation The MIT Faculty has made this article openly available. Please share how this access benefits you. Your story matters. Citation Antropow, Alyssa H., et al., "Enantioselective synthesis of (-)-vallesine: late-stage C17-oxidation via complex indole boronation." Organic Letters 20, 12 (2018): p. 3647-50 doi 10.1021/ acs.orglett.8b01428 ©2018 Author(s) As Published 10.1021/acs.orglett.8b01428 Publisher American Chemical Society (ACS) Version Author's final manuscript Citable link https://hdl.handle.net/1721.1/125882 Terms of Use Article is made available in accordance with the publisher's policy and may be subject to US copyright law. Please refer to the publisher's site for terms of use. HHS Public Access Author manuscript Author ManuscriptAuthor Manuscript Author Org Lett Manuscript Author . Author manuscript; Manuscript Author available in PMC 2019 June 15. Published in final edited form as: Org Lett. 2018 June 15; 20(12): 3647–3650. doi:10.1021/acs.orglett.8b01428. Enantioselective Synthesis of (−)-Vallesine: Late-stage C17- Oxidation via Complex Indole Boronation Alyssa H. Antropow, Nicholas R. Garcia, Kolby L. White, and Mohammad Movassaghi* Department of Chemistry, Massachusetts Institute of Technology, Cambridge, Massachusetts 02139, USA Abstract The first enantioselective total synthesis of (−)-vallesine via a strategy that features a late-stage regioselective C17-oxidation, followed by a highly stereoselective transannular cyclization is reported. The versatility of this approach is highlighted by divergent synthesis of the archetypal alkaloid of this family, (+)-aspidospermidine, and an A-ring oxygenated derivative (+)- deacetylaspidospermine, the precursor to (−)-vallesine, from a common intermediate. -
Enantioselective, Convergent Synthesis of the Ineleganolide Core by a Tandem Annulation Cite This: Chem
Chemical Science View Article Online EDGE ARTICLE View Journal | View Issue Enantioselective, convergent synthesis of the ineleganolide core by a tandem annulation Cite this: Chem. Sci.,2017,8,507 cascade† Robert A. Craig, II, Jennifer L. Roizen, Russell C. Smith, Amanda C. Jones, Scott C. Virgil and Brian M. Stoltz* An enantioselective and diastereoselective approach toward the synthesis of the polycyclic norditerpenoid ineleganolide is disclosed. A palladium-catalyzed enantioselective allylic alkylation is employed to stereoselectively construct the requisite chiral tertiary ether and facilitate the synthesis of a 1,3-cis- cyclopentenediol building block. Careful substrate design enabled the convergent assembly of the ineleganolide [6,7,5,5]-tetracyclic scaffold by a diastereoselective cyclopropanation–Cope rearrangement cascade under unusually mild conditions. Computational evaluation of ground state energies of late-stage synthetic intermediates was used to guide synthetic development and aid in the Creative Commons Attribution 3.0 Unported Licence. investigation of the conformational rigidity of these highly constrained and compact polycyclic structures. This work represents the first successful synthesis of the core structure of any member of the furanobutenolide-derived polycyclic norcembranoid diterpene family of natural products. Advanced Received 28th July 2016 synthetic manipulations generated a series of natural product-like compounds that were shown to Accepted 15th August 2016 possess selective secretory antagonism of either interleukin-5 or interleukin-17. This bioactivity stands in DOI: 10.1039/c6sc03347d contrast to the known antileukemic activity of ineleganolide and suggests the norcembranoid natural www.rsc.org/chemicalscience product core may serve as a useful scaffold for the development of diverse therapeutics. This article is licensed under a Introduction this rigid polycyclic scaffold is decorated with a network of nine stereogenic centers, eight of which are contiguous. -
Characterization of Poly(Amidoamine) Dendrimers and Their Complexes with Cu2+ by Matrix-Assisted Laser Desorption Ionization Mass Spectrometry
Macromolecules 2001, 34, 3567-3573 3567 Characterization of Poly(amidoamine) Dendrimers and Their Complexes with Cu2+ by Matrix-Assisted Laser Desorption Ionization Mass Spectrometry Li Zhou, David H. Russell,* Mingqi Zhao, and Richard M. Crooks* Department of Chemistry, Texas A&M University, P.O. Box 30012, College Station, Texas 77842-3012 Received October 16, 2000; Revised Manuscript Received February 20, 2001 ABSTRACT: Hydroxyl-terminated poly(amidoamine) (PAMAM) dendrimers of generation 2-4(Gn-OH, 2+ n ) 2, 3, and 4; Mr ∼ 3.7, 6.9, and 14.3 kDa, respectively) and dendrimers encapsulating Cu ions have been investigated by matrix-assisted laser desorption ionization time-of-flight (MALDI-TOF) mass spectrometry. Umbelliferone (7-hydroxycoumarin) and 2′,4′,6′-trihydroxyacetophenone (THAP) were used as the matrices for dendrimers with and without Cu2+ in the interior. The MALDI-TOF results provide accurate molecular weight determinations of all dendrimers and some multiple copper complexes of G2- OH and G3-OH (accuracy <0.01%). More importantly, this approach provides direct characterization of multiple-cation adducts and quantitative evaluation of the complexing capacity of dendrimers hosting transition-metal ions. The results are used to determine dendrimer structure and evaluate polydispersity. Introduction the relative concentrations of the dendrimer and metal ions, the size of the dendrimer, and the type of metal Here, we report a detailed analysis of hydroxyl- ion. Dendrimer encapsulation of metal ions is generally terminated poly(amidoamine) (PAMAM) dendrimers driven by a strong association between the ion and (Gn-OH) and their complexes with Cu2+ using matrix- intradendrimer tertiary amine groups. Chemical reduc- assisted laser desorption ionization time-of-flight (MAL- tion of dendrimer-encapsulated metal ions yields soluble DI-TOF) mass spectrometry (MS) and UV-vis spectros- dendrimer-encapsulated metal nanoparticles that usu- copy. -
Synthesis and Biosynthesis of Polyketide Natural Products
Syracuse University SURFACE Chemistry - Dissertations College of Arts and Sciences 12-2011 Synthesis and Biosynthesis of Polyketide Natural Products Atahualpa Pinto Syracuse University Follow this and additional works at: https://surface.syr.edu/che_etd Part of the Chemistry Commons Recommended Citation Pinto, Atahualpa, "Synthesis and Biosynthesis of Polyketide Natural Products" (2011). Chemistry - Dissertations. 181. https://surface.syr.edu/che_etd/181 This Dissertation is brought to you for free and open access by the College of Arts and Sciences at SURFACE. It has been accepted for inclusion in Chemistry - Dissertations by an authorized administrator of SURFACE. For more information, please contact [email protected]. Abstract Traditionally separate disciplines of a large and broad chemical spectrum, synthetic organic chemistry and biochemistry have found in the last two decades a fertile common ground in the area pertaining to the biosynthesis of natural products. Both disciplines remain indispensable in providing unique solutions on numerous questions populating the field. Our contributions to this interdisciplinary pursuit have been confined to the biosynthesis of polyketides, a therapeutically and structurally diverse class of natural products, where we employed both synthetic chemistry and biochemical techniques to validate complex metabolic processes. One such example pertained to the uncertainty surrounding the regiochemistry of dehydration and cyclization in the biosynthetic pathway of the marine polyketide spiculoic acid A. The molecule's key intramolecular cyclization was proposed to occur through a linear chain containing an abnormally dehydrated polyene system. We synthesized a putative advanced polyketide intermediate and tested its viability to undergo a mild chemical transformation to spiculoic acid A. In addition, we applied a synthetic and biochemical approach to elucidate the biosynthetic details of thioesterase-catalyzed macrocyclizations in polyketide natural products. -
The Development and SAR of Selective Sigma-2 Receptor Ligands for the Diagnosis of Cancer Mark Ashford University of Wollongong
University of Wollongong Research Online University of Wollongong Thesis Collection University of Wollongong Thesis Collections 2010 The development and SAR of selective sigma-2 receptor ligands for the diagnosis of cancer Mark Ashford University of Wollongong Recommended Citation Ashford, Mark, The development and SAR of selective sigma-2 receptor ligands for the diagnosis of cancer, Doctor of Philosophy thesis, School of Chemistry, University of Wollongong, 2010. http://ro.uow.edu.au/theses/3634 Research Online is the open access institutional repository for the University of Wollongong. For further information contact the UOW Library: [email protected] The Development and SAR of Selective Sigma-2 Receptor Ligands for the Diagnosis of Cancer Mark E. Ashford B. Med. Chem. Hons (Adv) A thesis submitted in fulfilment of the requirements for the award of the degree Doctor of Philosophy From University of Wollongong School of Chemistry August 2010 Declaration I, Mark Edward Ashford, declare that this thesis, submitted in fulfilment of the requirements for the award of Doctor of Philosophy, in the School of Chemistry, Faculty of Science, University of Wollongong, is wholly my own work unless otherwise referenced or acknowledged. The document has not been submitted for qualifications at any other academic institution. Mark E. Ashford 2010 Mark Ashford, PhD Thesis 2010 ii Table of Contents Declaration.......................................................................................................................ii List of Figures.................................................................................................................vi -
Dendpoint: a Web Resource for Dendrimer Pharmacokinetics Investigation and Prediction Lisa M
www.nature.com/scientificreports OPEN dendPoint: a web resource for dendrimer pharmacokinetics investigation and prediction Lisa M. Kaminskas1,6*, Douglas E. V. Pires2,3,4,6 & David B. Ascher 3,4,5* Nanomedicine development currently sufers from a lack of efcient tools to predict pharmacokinetic behavior without relying upon testing in large numbers of animals, impacting success rates and development costs. This work presents dendPoint, the frst in silico model to predict the intravenous pharmacokinetics of dendrimers, a commonly explored drug vector, based on physicochemical properties. We have manually curated the largest relational database of dendrimer pharmacokinetic parameters and their structural/physicochemical properties. This was used to develop a machine learning-based model capable of accurately predicting pharmacokinetic parameters, including half- life, clearance, volume of distribution and dose recovered in the liver and urine. dendPoint successfully predicts dendrimer pharmacokinetic properties, achieving correlations of up to r = 0.83 and Q2 up to 0.68. dendPoint is freely available as a user-friendly web-service and database at http://biosig.unimelb. edu.au/dendpoint. This platform is ultimately expected to be used to guide dendrimer construct design and refnement prior to embarking on more time consuming and expensive in vivo testing. A lack of appropriate pharmacokinetic behavior has historically been one of the leading causes of drug failure in clinical trials1. Advances in controlled release technologies and nanomedicine, however, are increasingly pro- viding new opportunities to circumvent this shortcoming in rational drug development initiatives and are pro- viding renewed hope for old drug candidates. Importantly, a wide range of nanosized materials with a variety of chemico-biological traits that can be used to alter and drive the pharmaceutical behavior of loaded drugs (including colloids, nanoparticles and polymers) have been developed and explored for their potential as relatively biologically inert drug carriers.