Systematic Approach for Wettability Prediction Using Molecular Dynamics Simulations Ahmed Jarray, Herman Wijshoff, Jurriaan A

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Systematic Approach for Wettability Prediction Using Molecular Dynamics Simulations Ahmed Jarray, Herman Wijshoff, Jurriaan A Electronic Supplementary Material (ESI) for Soft Matter. This journal is © The Royal Society of Chemistry 2020 Systematic approach for wettability prediction using molecular dynamics simulations Ahmed Jarray, Herman Wijshoff, Jurriaan A. Luiken, and Wouter K. den Otter S1 Standard deviation and block averaging over longer simulation time To assess the required simulation times to equilibrate a simulation box and to obtain accurate and reproducible solubility parameters, we performed MD simulations with a duration of 1 ns on randomly selected molecules from the following categories: - Small molecules: Decane, Triethylsilane, Ethanol, Nonane - Polymers: PET, POM, PVA - The largest surfactant: Tergitol Fig. S1 shows the evolution of the solubility parameter with simulation time block-averaged every 20 ps. The MD simulation starts with an energy minimized configuration, and therefore the solubility parameter rises slightly in the beginning. Only minor variations are observed after about 100 ps, indicating that most systems are at, or close to, equilibrium. Standard deviations of the 20 ps block averages over the interval from 200 ps to 1 ns are included in Table S1. This indicates that an equilibration phase of 180 ps and a sampling duration of 20 ps are acceptable, for the small molecules and polymer fragments considered here, to obtain a reasonable estimate of the solubility parameter. This is consistent with other studies 1–3 where 200 ps was enough to compute the solubility parameter. With this short equilibration and sampling durations, the proposed approach balances accuracy and speed, and thereby enables one to quickly screen a lot of liquids in terms of their wettability. Fig. S1 Solubility parameter of eight molecules plotted against simulation time and block averaged every 20 ps. To make sure our results are reproducible, we repeated the preparation procedure described in section 2.2 with 5 different initial configurations for each of these randomly selected molecules. Table S1 shows the results and obtained standard deviations. For the large molecules and polymers the deviation has a maximum range of 0.23 (J/cm3)0:5, and for small molecules, it is below 0.17 (J/cm3)0:5. Table S1 Standards deviations for eight molecules over the five different initial configurations. All values in (J/cm3)0:5 Solubility parameter Standard deviations Config. 1 Config. 2 Config. 3 Config. 4 Config. 5 5 Configs. 0.2 to 1 ns Decane 16.58 16.46 16.45 16.51 16.64 0.07 0.06 Ethanol 24.67 24.70 24.56 24.91 24.72 0.17 0.19 . Nonane 16.90 16.51 16.68 16.72 16.46 0.15 0.15 PET 23.08 22.62 22.92 22.81 22.49 0.21 0.10 POM 24.26 23.88 24.08 23.69 23.72 0.22 0.11 PVA 24.42 24.74 24.42 24.83 24.66 0.17 0.21 Tergitol 20.70 20.62 20.72 21.07 20.36 0.23 0.19 Triethylsilane 15.72 15.82 15.88 15.95 15.88 0.08 0.05 Abbreviations: PET: polyethylene terephthalate, POM: polyoxymethylene, and PVA: polyvinyl alcohol. 1–12 | 1 S2 Pictorial of all the employed compounds Fig. S2 Molecular structure of the studied liquids, surfactants and polymers. 2 | 1–12 Fig. S2 Continued. 1–12 | 3 S3 Surface tensions calculated using a constant probe radius ra = 1.4 Å Calculated versus experimental values of surface tension obtained using equation (7) are plotted in Fig. S3, where the probe radius for the calculation of the solvent accessible area has a constant value ra = 1.4 Å. Results are in good agreement with experiments, with an overall 3% deviation relative to the experimental values. Fig. S3 Calculated versus experimental surface tension obtained using equation (7), with a constant probe radius ra = 1.4 Å. S4 Surface tension and solubility parameters obtained by the Y-MB method Solubility parameter obtained using the Yamamoto-Molecular Break (Y-MB) group contribution method 4,5 are provided in Table S3 for all molecules studied in the main text. Comparing with Table 1, we notice that dh values predicted by Y-MB are often higher than those computed from MD. One explanation is that Y-MB overestimates the hydrogen-bonding contribution of the solubility parameter, as pointed out by Levin et al. 6 Re-fitting Equation (7) with the solubility parameters obtained by Y-MB gave b = 0.4577 and a = 0.5448. These were used to plot the experimental versus calculated surface tensions in Fig. S4. Surface tensions obtained using solubility parameter values from Y-MB method agrees well with experiments for the case of hydrocarbons and some liquids such as glycerol, Furan and cyclobutanone. For the other liquids and polymers, the calculated surface tension shows higher deviations comparing to experiments. Fig. S4 Calculated versus experimental surface tensions obtained using our equation (7), where the Y-MB method is used to calculate the solubility parameters. The values a = 0.5448 and b = 0.4577 where obtained by re-fitting Equation 7. 4 | 1–12 Table S2 Experimental and computed solubility parameters in (J/cm3)0:5 obtained using Y-MD method, along with the experimental and calculated surface tensions (mN/m) at 298.15 K, obtained using equation (7). Y-MB Exp. Calculated ∗∗ ‡ d dd dp dh g g using Eq. 7 Polar and H-bonding liquids Acetic acid 21:4 15:2 6:6 13:6 27.1 24.0 Acetaldehyde 21:7 15:8 12:0 8:8 20.5 24.8 Acetone 19:3 15:7 9:1 6:5 23.5−25.25 22.8 Acetophenone 20:4 18:7 6:8 4:5 38.9−39.15 32.4 Allyl alcohol 23:8 16:2 8:0 15:5 25.3 30.3 Anisole 19:7 18:3 4:9 5:6 35.1 30.1 Benzyl alcohol 23:5 19:0 6:0 12:5 39.3 37.5 1-Bromonaphthalene 21:5 20:3 4:7 5:1 44.6 38.9 Butanal 18:9 15:7 8:5 6:1 24.3 23.3 Butanol 22:6 15:8 6:4 14:8 24.9−25.75 29.4 Cyclobutanone 22:7 18:4 11:8 6:1 31.9 32.3 Cyclopentanone 20:6 18:0 8:6 5:1 33.3 29.7 Diethylene glycol 29:1 17:4 11:0 20:6 45.2 44.1 Dipropyl ether 15:9 15:1 3:5 3:5 20.0 20.0 Ethanol 25:0 15:6 9:3 17:2 22.0 29.8 Ethanolamine 29:6 17:8 10:3 21:3 48.3 42.7 Ethylene carbonate 18:0 22:4 9:3 1:3 40.7 Ethyl acetate 18:5 15:7 6:3 7:5 23.4 22.8 Ethylene glycol 35:3 17:8 13:5 27:4 48.0 54.4 Formamide 34:5 17:7 21:5 20:5 57.0 48.8 Furan 18:3 16:7 4:9 5:8 24.1 23.2 Furfuryl alcohol 25:1 18:6 8:7 14:5 38.2 38.0 Glycerol 35:7 18:3 12:7 27:8 63.4 59.5 Glycerol carbonate 32:0 18:5 21:8 14:5 52.2 2-Methyl-3-pentanol 18:9 15:6 4:6 9:6 24.4 25.2 Methyl salicylate 22:9 18:7 8:7 10:2 39.0 37.0 Methyl vinyl ether 16:7 14:9 5:6 5:2 15.7 18.6 Pentanal 18:5 15:8 7:6 5:8 24.8−25.45 23.8 Pentanol 21:7 16:0 5:8 13:6 25.4−26.75 29.3 Propanol 22:6 15:7 7:3 14:6 23.3 28.2 Propylamine 18:5 15:7 5:2 8:3 21.7−22.45 22.4 Propylene oxide 18:9 15:8 7:5 7:0 24.5 22.3 Tetramethylsilane 13:2 12:9 1:7 2:0 12.3 14.8 Triethylsilane 13:4 13:1 1:9 1:9 20.3 14.7 Trioxane 23:0 17:8 10:8 9:7 31.6 Trisilane 13:7 13:7 1:2 0:1 18.7 16.9 Water 47:9 0:0 38:8 24:5 72.0 54.2 Surfactants DPGME 20:1 16:2 6:4 9:9 28.5 Dynol607 17:2 15:7 4:7 5:4 29.5 Heptanediol 23:4 16:5 6:9 15:1 37.0 34.6 1,2-Hexanediol 25:2 16:7 7:1 17:5 36.2 37.5 Pentanediol 26:9 17:0 8:9 18:9 44.0 40.4 Surfynol 104 18:3 16:4 3:7 7:2 33.1 28.5 Tergitol NP-9 19:0 16:3 7:7 5:9 32.0 29.5 Polymeric substrates PC 21:3 18:9 5:1 8:4 42.7 54.5 PET 23:1 19:6 11:7 3:6 40.0−43.05 45.5 PMMA 16:9 16:2 1:6 4:7 39.2 32.6 Abbreviation: PC: polycarbonate, PET: polyethylene terephthalate, PMMA: polymethyl methacrylate, POM: polyoxymethylene, and DPGME: di(propylene glycol) methyl ether. Surface tensions at 293.15 K. ∗∗ Experimental surface tension values are obtained from Refs. 7–13. 5 Dispersed experimental values in the literature. ‡ Equation (7) with a probe radius that depends on the atom types of the molecules. 1–12 | 5 Table S2 Continued. Y-MB Exp. Calculated ∗∗ ‡ d dd dp dh g g using Eq.
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