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Nitrogen Fixation by Trichodesmium Spp.: an Important Source of New Nitrogen to the Tropical and Subtropical North Atlantic Ocean Douglas G
GLOBAL BIOGEOCHEMICAL CYCLES, VOL. 19, GB2024, doi:10.1029/2004GB002331, 2005 Nitrogen fixation by Trichodesmium spp.: An important source of new nitrogen to the tropical and subtropical North Atlantic Ocean Douglas G. Capone,1 James A. Burns,1,2 Joseph P. Montoya,3 Ajit Subramaniam,4 Claire Mahaffey,1,5 Troy Gunderson,1 Anthony F. Michaels,1 and Edward J. Carpenter6 Received 6 July 2004; revised 19 January 2005; accepted 9 March 2005; published 8 June 2005. [1] The broad distribution and often high densities of the cyanobacterium Trichodesmium spp. in oligotrophic waters imply a substantial role for this one taxon in the oceanic N cycle of the marine tropics and subtropics. New results from 154 stations on six research cruises in the North Atlantic Ocean show depth-integrated N2 fixation by Trichodesmium spp. at many stations that equalled or exceeded the estimated vertical flux À of NO3 into the euphotic zone by diapycnal mixing. Areal rates are consistent with those derived from several indirect geochemical analyses. Direct measurements of N2 fixation rates by Trichodesmium are also congruent with upper water column N budgets derived from parallel determinations of stable isotope distributions, clearly showing that N2 fixation by Trichodesmium is a major source of new nitrogen in the tropical North Atlantic. We project a conservative estimate of the annual input of new N into the tropical 12 North Atlantic of at least 1.6 Â 10 mol N by Trichodesmium N2 fixation alone. This input can account for a substantial fraction of the N2 fixation in the North Atlantic inferred by several of the geochemical approaches. -
Fronts in the World Ocean's Large Marine Ecosystems. ICES CM 2007
- 1 - This paper can be freely cited without prior reference to the authors International Council ICES CM 2007/D:21 for the Exploration Theme Session D: Comparative Marine Ecosystem of the Sea (ICES) Structure and Function: Descriptors and Characteristics Fronts in the World Ocean’s Large Marine Ecosystems Igor M. Belkin and Peter C. Cornillon Abstract. Oceanic fronts shape marine ecosystems; therefore front mapping and characterization is one of the most important aspects of physical oceanography. Here we report on the first effort to map and describe all major fronts in the World Ocean’s Large Marine Ecosystems (LMEs). Apart from a geographical review, these fronts are classified according to their origin and physical mechanisms that maintain them. This first-ever zero-order pattern of the LME fronts is based on a unique global frontal data base assembled at the University of Rhode Island. Thermal fronts were automatically derived from 12 years (1985-1996) of twice-daily satellite 9-km resolution global AVHRR SST fields with the Cayula-Cornillon front detection algorithm. These frontal maps serve as guidance in using hydrographic data to explore subsurface thermohaline fronts, whose surface thermal signatures have been mapped from space. Our most recent study of chlorophyll fronts in the Northwest Atlantic from high-resolution 1-km data (Belkin and O’Reilly, 2007) revealed a close spatial association between chlorophyll fronts and SST fronts, suggesting causative links between these two types of fronts. Keywords: Fronts; Large Marine Ecosystems; World Ocean; sea surface temperature. Igor M. Belkin: Graduate School of Oceanography, University of Rhode Island, 215 South Ferry Road, Narragansett, Rhode Island 02882, USA [tel.: +1 401 874 6533, fax: +1 874 6728, email: [email protected]]. -
Detection and Study of Blooms of Trichodesmium Erythraeum and Noctiluca Miliaris in NE Arabian Sea S
Detection and study of blooms of Trichodesmium erythraeum and Noctiluca miliaris in NE Arabian Sea S. G. Prabhu Matondkar 1*, R.M. Dwivedi 2, J. I. Goes 3, H.do.R. Gomes 3, S.G. Parab 1and S.M.Pednekar 1 1National Institute of Oceanography, Dona-Paula 403 004, Goa, INDIA 2Space Application Centre, Ahmedabad, Gujarat, INDIA 3Bigelow Laboratory for Ocean Sciences, West Boothbay Harbor, Maine, 04575, USA Abstract The Arabian Sea is subject to semi-annual wind reversals associated with the monsoon cycle that result in two periods of elevated phytoplankton productivity, one during the northeast (NE) monsoon (November-February) and the other during the southwest (SW) monsoon (June- September). Although the seasonality of phytoplankton biomass in these offshore waters is well known, the abundance and composition of phytoplankton associated with this distinct seasonal cycle is poorly understood. Monthly samples were collected from the NE Arabian Sea (offshore) from November to May. Phytoplankton were studied microscopically up to the species level. Phytoplankton counts are supported by Chl a estimations and chemotaxonomic studies using HPLC. Surface phytoplankton cell counts varied from 0.1912 (Mar) to 15.83 cell x104L-1 (Nov). In Nov Trichodesmium thiebautii was the dominant species. It was replaced by diatom and dinoflagellates in the following month. Increased cell counts during Jan were predominantly due to dinoflagellates Gymnodinium breve , Gonyaulax schilleri and Amphidinium carteare . Large blooms of Noctiluca miliaris were observed in Feb a direct consequence of the large populations of G. schilleri upon which N. miliaris is known to graze. In Mar and April, N. miliaris was replaced by blooms of Trichodesmium erythraeum . -
Periodic and Coordinated Gene Expression Between a Diazotroph and Its Diatom Host
The ISME Journal (2019) 13:118–131 https://doi.org/10.1038/s41396-018-0262-2 ARTICLE Periodic and coordinated gene expression between a diazotroph and its diatom host 1 1,2 1 3 4 Matthew J. Harke ● Kyle R. Frischkorn ● Sheean T. Haley ● Frank O. Aylward ● Jonathan P. Zehr ● Sonya T. Dyhrman1,2 Received: 11 April 2018 / Revised: 28 June 2018 / Accepted: 28 July 2018 / Published online: 16 August 2018 © International Society for Microbial Ecology 2018 Abstract In the surface ocean, light fuels photosynthetic carbon fixation of phytoplankton, playing a critical role in ecosystem processes including carbon export to the deep sea. In oligotrophic oceans, diatom–diazotroph associations (DDAs) play a keystone role in ecosystem function because diazotrophs can provide otherwise scarce biologically available nitrogen to the diatom host, fueling growth and subsequent carbon sequestration. Despite their importance, relatively little is known about the nature of these associations in situ. Here we used metatranscriptomic sequencing of surface samples from the North Pacific Subtropical Gyre (NPSG) to reconstruct patterns of gene expression for the diazotrophic symbiont Richelia and we – 1234567890();,: 1234567890();,: examined how these patterns were integrated with those of the diatom host over day night transitions. Richelia exhibited significant diel signals for genes related to photosynthesis, N2 fixation, and resource acquisition, among other processes. N2 fixation genes were significantly co-expressed with host nitrogen uptake and metabolism, as well as potential genes involved in carbon transport, which may underpin the exchange of nitrogen and carbon within this association. Patterns of expression suggested cell division was integrated between the host and symbiont across the diel cycle. -
Bloom of Trichodesmium Erythraeum (Ehr.) and Its Impact on Water Quality and Plankton Community Structure in the Coastal Waters of Southeast Coast of India
Indian Journal of Marine Science Vol. 39(3), September 2010, pp. 323-333 Bloom of Trichodesmium erythraeum (Ehr.) and its impact on water quality and plankton community structure in the coastal waters of southeast coast of India A K Mohanty 1, K K Satpathy 1, G Sahu 1, K J Hussain 1, M V R Prasad 1 & S K Sarkar 2 1 Indira Gandhi Centre for Atomic Research, Kalpakkam, Tamil Nadu- 603 102 India 2 Department of Marine Science, University of Calcutta, Kolkata- 700 019 India [Email : [email protected]] Received 14 September 2009; revised 11 January 2010 An intense bloom of Trichodesmium erythraeum was observed in the coastal waters (about 600 m away from the shore) of southeast coast of India during the post-northeast monsoon period. The bloom appeared during a relatively high temperature condition with coastal water salinity > 31 psu. A significant reduction in nitrate concentration was noticed during the bloom period, whereas, relatively high concentration of phosphate and total phosphorous was observed. An abrupt increase in ammonia concentration to the tune of 284.36 µmol l -1 was observed which coincided with the highest Trichodesmium density (2.88 × 10 7 cells l -1). Contribution of Trichodesmium to the total phytoplankton density ranged from 7.79% to 97.01%. A distinct variation in phytoplankton species number and phytoplankton diversity indices was noticed. The lowest diversity indices coincided with the observed highest Trichodesmium density. Concentrations of chlorophyll-a (maximum 42.15 mg m -3) and phaeophytin (maximum 46.23 mg m -3) increased abnormally during the bloom. -
A Model for the Marine Cyanobacteria, Trichodesmium Robson
20th International Congress on Modelling and Simulation, Adelaide, Australia, 1–6 December 2013 www.mssanz.org.au/modsim2013 A physiological model for the marine cyanobacteria, Trichodesmium Barbara J. Robson1, Mark Baird2 and Karen Wild-Allen2 1CSIRO Land and Water, Black Mountain 2CSIRO Marine and Atmospheric Research, Hobart Email: [email protected] Abstract: Nitrogen fixation by the marine cyanobacterium, Trichodesmium, is believed to form a substantial component of the nitrogen budget of the Great Barrier Reef Lagoon. Here, we present a new, physiologically-based model to predict the distribution and growth of Trichodesmium. The model has been incorporated into a large-scale, process-based, three-dimensional hydrodynamic, sediment dynamic and biogeochemical model of the Great Barrier Reef Lagoon through eReefs, a major collaborative project that is developing near-real-time and forecasting models to inform management of this important environmental asset. The model simulates the growth and respiration of Trichodesmium colonies, along with uptake of nutrients, fixation of atmospheric nitrogen, changes in cellular buoyancy, grazing by zooplankton and death associated with lysis by cyanophages. To facilitate improved simulation of nutrient dynamics as well as changes in carbohydrate ballasting (which affects buoyancy), the model allows variable intracellular C:N:P:Chlorophyll a ratios. Chlorophyll a accumulation and Trichodesmium growth depend on the intracellular availability of nutrients and fixed carbon. Carbon accumulation is a function of the spectrally resolved light environment, so that changes in light quality as well as light intensity may affect growth. As Trichodesmium colonies accumulate carbon, their buoyancy decreases, allowing the vertical movement of Trichodesmium through the water column to be simulated. -
Strengthening of the Kuroshio Current by Intensifying Tropical Cyclones
RESEARCH OCEAN CIRCULATION geostrophic adjustment, was first considered by Rossby in 1938 (19) and has since been in- Strengthening of the Kuroshio current by intensifying vestigated in a variety of contexts both linear and nonlinear (20–23). Common to all those tropical cyclones studies is that the flows in question hold less energy at their end states than they do initially, Yu Zhang1*, Zhengguang Zhang1, Dake Chen2,3, Bo Qiu4, Wei Wang1 and energy is dispersed in the form of inertial gravity waves ( 19, 24). It is therefore antici- A positive feedback mechanism between tropical cyclones (TCs) and climate warming can be pated that eddies under the influence of strong seen by examining TC-induced energy and potential vorticity (PV) changes of oceanic geostrophic storms may be perturbed and subsequently eddies. We found that substantial dissipation of eddies, with a strong bias toward dissipation of undertake adjustment processes that atten- anticyclonic eddies, is directly linked to TC activity. East of Taiwan, where TCs show a remarkable uate them (25). intensifying trend in recent decades, the ocean exhibits a corresponding upward trend of positive Evidence continues to mount that both PV anomalies. Carried westward by eddies, increasing numbers of positive PV anomalies impinge on mechanisms described above exist, working the Kuroshio current, causing the mean current to accelerate downstream. This acts in opposition together to reduce the strength of anticyclonic to decreasing basin-scale wind stress and has a potentially important warming impact on the eddies but acting against each other in chang- extratropical ocean and climate. ing cyclonic eddies. Which process dominates, and what overall influence the TCs exert on an underlying eddy field, remains unclear. -
Effects of the Kuroshio Current on Copepod Assemblages in Taiwan
Zoological Studies 50(4): 475-490 (2011) Effects of the Kuroshio Current on Copepod Assemblages in Taiwan Shih Hui Hsiao1,2,5, Tien-Hsi Fang2, Chang-tai Shih3,4, and Jiang-Shiou Hwang5,* 1Department of Science Education, National Taipei University of Education, Taipei 106, Taiwan 2Department of Marine Environmental Informatics, National Taiwan Ocean University, Keelung 202, Taiwan 3Institute of Environmental Biology and Fisheries Science, National Taiwan Ocean University, Keelung 202, Taiwan 4Canadian Museum of Nature, Ottawa K1P 6P4, Canada 5Institute of Marine Biology, National Taiwan Ocean University, Keelung 202, Taiwan (Accepted February 25, 2011) Shih Hui Hsiao, Tien-Hsi Fang, Chang-tai Shih, and Jiang-Shiou Hwang (2011) Effects of the Kuroshio Current on copepod assemblages in Taiwan. Zoological Studies 50(4): 475-490. The Kuroshio Current (KC) is a northerly flowing warm-water current, which has major effects on the hydrography and faunal assemblages along the east coast of Taiwan. We studied the abundance and diversity of copepods at 5 stations for 3 consecutive years (2000-2002). Copepod samples were collected with a plankton net with a 1-m mouth opening and a mesh size of 333 μm deployed in oblique tows from 200 to 0 m in depth. In total, 174 copepod species including 6 orders, 31 families, and 68 genera (111 calanoids, 11 cyclopoids, 4 harpacticoids, 2 mormonilloids, 44 poecilostomatoids, and 2 siphonostomatoids) were identified at the species level. Spatial variations in copepod abundances among these 5 stations were not significant. The composition of the indicator species and cluster analysis varied seasonally, indicating seasonal succession. We suggest that copepod species of Acartia negligens, Clausocalanus mastigophorus, Cosmocalanus darwini, and Lucicutia flavicornis are indicator species of the KC in winter when the northeast monsoon (NEM) prevails; in contrast, Acrocalanus spp. -
Trichodesmium Spp., the Gldglu Ratio Closely Approximated the Glnlakg Ratio Over the Die1 Cycle
MARINE ECOLOGY PROGRESS SERIES Published November 3 Mar Ecol Prog Ser Nitrogen fixation, uptake and metabolism in natural and cultured populations of Trichodesmium spp. Margaret R. Mulholland*, Douglas G. Capone*" Chesapeake Biological Laboratory, University of Maryland Center for Environmental Science, PO Box 38. Solomons, Maryland 20688, USA ABSTRACT: Uptake rates of several combined N sources, NZfixation, intracellular glutamate (glu) and glutamine (gln) pools, and glutamine synthetase (GS) activity were measured in natural populations and a culture of Trichodesmium IMSlOl grown on seawater medium without added N. In cultured populations, the ratio of GS transferase/biosynthetic activity (an index of the proportion of the GS pool that is active) was lower, and intracellular pools of glu and gln and the ratios of gldglu and glnla- ketoglutarate (glnlakg) ratios were higher when NZ fixation was highest (mid-day). There was an excess capacity for NH,' assimilation via GS, indicating that this was not the rate-limiting step in N uti- lization. In natural populations of Trichodesmium spp., the gldglu ratio closely approximated the glnlakg ratio over the die1 cycle. High gln/glu and gln/akg ratios were noted in near-surface popula- tion~.These ratios decreased in samples collected from greater depths. Natural populations of Tn- chodesmium spp. showed a high capacity for the uptake of NH4+,glu, and mixed amino acids (AA). Rates of NO3- and urea uptake were low. NH,+ accumulated in the culture medium during growth and rates of NH4+ uptake showed a positive relationship with the NH4+ concentration in the medium. Although rates of NZfixation were highest and accounted for the majority of the total measured N uti- lization during mid-day, rates of NH4+uptake exceeded rates of NZfixation throughout much of the die1 cycle. -
Lecture 4: OCEANS (Outline)
LectureLecture 44 :: OCEANSOCEANS (Outline)(Outline) Basic Structures and Dynamics Ekman transport Geostrophic currents Surface Ocean Circulation Subtropicl gyre Boundary current Deep Ocean Circulation Thermohaline conveyor belt ESS200A Prof. Jin -Yi Yu BasicBasic OceanOcean StructuresStructures Warm up by sunlight! Upper Ocean (~100 m) Shallow, warm upper layer where light is abundant and where most marine life can be found. Deep Ocean Cold, dark, deep ocean where plenty supplies of nutrients and carbon exist. ESS200A No sunlight! Prof. Jin -Yi Yu BasicBasic OceanOcean CurrentCurrent SystemsSystems Upper Ocean surface circulation Deep Ocean deep ocean circulation ESS200A (from “Is The Temperature Rising?”) Prof. Jin -Yi Yu TheThe StateState ofof OceansOceans Temperature warm on the upper ocean, cold in the deeper ocean. Salinity variations determined by evaporation, precipitation, sea-ice formation and melt, and river runoff. Density small in the upper ocean, large in the deeper ocean. ESS200A Prof. Jin -Yi Yu PotentialPotential TemperatureTemperature Potential temperature is very close to temperature in the ocean. The average temperature of the world ocean is about 3.6°C. ESS200A (from Global Physical Climatology ) Prof. Jin -Yi Yu SalinitySalinity E < P Sea-ice formation and melting E > P Salinity is the mass of dissolved salts in a kilogram of seawater. Unit: ‰ (part per thousand; per mil). The average salinity of the world ocean is 34.7‰. Four major factors that affect salinity: evaporation, precipitation, inflow of river water, and sea-ice formation and melting. (from Global Physical Climatology ) ESS200A Prof. Jin -Yi Yu Low density due to absorption of solar energy near the surface. DensityDensity Seawater is almost incompressible, so the density of seawater is always very close to 1000 kg/m 3. -
Global Ocean Surface Velocities from Drifters: Mean, Variance, El Nino–Southern~ Oscillation Response, and Seasonal Cycle Rick Lumpkin1 and Gregory C
JOURNAL OF GEOPHYSICAL RESEARCH: OCEANS, VOL. 118, 2992–3006, doi:10.1002/jgrc.20210, 2013 Global ocean surface velocities from drifters: Mean, variance, El Nino–Southern~ Oscillation response, and seasonal cycle Rick Lumpkin1 and Gregory C. Johnson2 Received 24 September 2012; revised 18 April 2013; accepted 19 April 2013; published 14 June 2013. [1] Global near-surface currents are calculated from satellite-tracked drogued drifter velocities on a 0.5 Â 0.5 latitude-longitude grid using a new methodology. Data used at each grid point lie within a centered bin of set area with a shape defined by the variance ellipse of current fluctuations within that bin. The time-mean current, its annual harmonic, semiannual harmonic, correlation with the Southern Oscillation Index (SOI), spatial gradients, and residuals are estimated along with formal error bars for each component. The time-mean field resolves the major surface current systems of the world. The magnitude of the variance reveals enhanced eddy kinetic energy in the western boundary current systems, in equatorial regions, and along the Antarctic Circumpolar Current, as well as three large ‘‘eddy deserts,’’ two in the Pacific and one in the Atlantic. The SOI component is largest in the western and central tropical Pacific, but can also be seen in the Indian Ocean. Seasonal variations reveal details such as the gyre-scale shifts in the convergence centers of the subtropical gyres, and the seasonal evolution of tropical currents and eddies in the western tropical Pacific Ocean. The results of this study are available as a monthly climatology. Citation: Lumpkin, R., and G. -
Site Selection of Ocean Current Power Generation from Drifter Measurements
SITE SELECTION OF CURRENT POWER GENERATION 1 Site selection of ocean current power generation from drifter 2 measurements 3 4 Yu-Chia Chang1*, Peter C. Chu2, Ruo-Shan Tseng3 5 6 1 Department of Marine Biotechnology and Resources, National Sun Yat-sen University, 7 Kaohsiung 80424, Taiwan 8 2 Naval Ocean Analysis and Prediction Laboratory, Naval Postgraduate School, Monterey, 9 CA 93943, USA 10 3 Department of Oceanography, National Sun Yat-sen University, Kaohsiung 80424, 11 Taiwan 12 13 14 December 2014 15 16 17 18 19 20 21 ----------------------------------------- 22 *Corresponding author. E-mail: [email protected], Fax: 886-7-5255033 1 SITE SELECTION OF CURRENT POWER GENERATION 23 Abstract 24 Site selection of ocean current power generation is usually based on numerical ocean 25 calculation models. In this study however, the selection near the coast of East Asia is 26 optimally from the Surface Velocity Program (SVP) data using the bin average method. 27 Japan, Vietnam, Taiwan, and Philippines have suitable sites for the development of ocean 28 current power generation. In these regions, the average current speeds reach 1.4, 1.2, 1.1, 29 and 1.0 m s-1, respectively. Vietnam has a better bottom topography to develop the current 30 power generation. Taiwan and Philippines also have good conditions to build plants for 31 generating ocean current power. Combined with the four factors of site selection (near 32 coast, shallow seabed, stable flow velocity, and high flow speed), the waters near 33 Vietnam is most suitable for the development of current power generation.