Hormonal Regulation of CREB Phosphorylation in the Anteroventral Periventricular Nucleus
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Progesterone Receptor Coregulators As Factors Supporting the Function of the Corpus Luteum in Cows
G C A T T A C G G C A T genes Article Progesterone Receptor Coregulators as Factors Supporting the Function of the Corpus Luteum in Cows Robert Rekawiecki * , Karolina Dobrzyn, Jan Kotwica and Magdalena K. Kowalik Institute of Animal Reproduction and Food Research of the Polish Academy of Sciences, Tuwima 10, 10–747 Olsztyn, Poland; [email protected] (K.D.); [email protected] (J.K.); [email protected] (M.K.K.) * Correspondence: [email protected]; Tel.: +48-89-539-31-17 Received: 5 July 2020; Accepted: 7 August 2020; Published: 12 August 2020 Abstract: Progesterone receptor (PGR) for its action required connection of the coregulatory proteins, including coactivators and corepressors. The former group exhibits a histone acetyltransferase (HAT) activity, while the latter cooperates with histone deacetylase (HDAC). Regulations of the coregulators mRNA and protein and HAT and HDAC activity can have an indirect effect on the PGR function and thus progesterone (P4) action on target cells. The highest mRNA expression levels for the coactivators—histone acetyltransferase p300 (P300), cAMP response element-binding protein (CREB), and steroid receptor coactivator-1 (SRC-1)—and nuclear receptor corepressor-2 (NCOR-2) were found in the corpus luteum (CL) on days 6 to 16 of the estrous cycle. The CREB protein level was higher on days 2–10, whereas SRC-1 and NCOR-2 were higher on days 2–5. The activity of HAT and HDAC was higher on days 6–10 of the estrous cycle. All of the coregulators were localized in the nuclei of small and large luteal cells. -
The Title of the Dissertation
UNIVERSITY OF CALIFORNIA SAN DIEGO Novel network-based integrated analyses of multi-omics data reveal new insights into CD8+ T cell differentiation and mouse embryogenesis A dissertation submitted in partial satisfaction of the requirements for the degree Doctor of Philosophy in Bioinformatics and Systems Biology by Kai Zhang Committee in charge: Professor Wei Wang, Chair Professor Pavel Arkadjevich Pevzner, Co-Chair Professor Vineet Bafna Professor Cornelis Murre Professor Bing Ren 2018 Copyright Kai Zhang, 2018 All rights reserved. The dissertation of Kai Zhang is approved, and it is accept- able in quality and form for publication on microfilm and electronically: Co-Chair Chair University of California San Diego 2018 iii EPIGRAPH The only true wisdom is in knowing you know nothing. —Socrates iv TABLE OF CONTENTS Signature Page ....................................... iii Epigraph ........................................... iv Table of Contents ...................................... v List of Figures ........................................ viii List of Tables ........................................ ix Acknowledgements ..................................... x Vita ............................................. xi Abstract of the Dissertation ................................. xii Chapter 1 General introduction ............................ 1 1.1 The applications of graph theory in bioinformatics ......... 1 1.2 Leveraging graphs to conduct integrated analyses .......... 4 1.3 References .............................. 6 Chapter 2 Systematic -
Somatostatin in the Periventricular Nucleus of the Female Rat: Age Specific Effects of Estrogen and Onset of Reproductive Aging
4 Somatostatin in the Periventricular Nucleus of the Female Rat: Age Specific Effects of Estrogen and Onset of Reproductive Aging Eline M. Van der Beek, Harmke H. Van Vugt, Annelieke N. Schepens-Franke and Bert J.M. Van de Heijning Human and Animal Physiology Group, Dept. Animal Sciences, Wageningen University & Research Centre The Netherlands 1. Introduction The functioning of the growth hormone (GH) and reproductive axis is known to be closely related: both GH overexpression and GH-deficiency are associated with dramatic decreases in fertility (Bartke, 1999; Bartke et al, 1999; 2002; Naar et al, 1991). Also, aging results in significant changes in functionality of both axes within a similar time frame. In the rat, GH secretion patterns are clearly sexually dimorphic (Clark et al, 1987; Eden et al, 1979; Gatford et al, 1998). This has been suggested to result mainly from differences in somatostatin (SOM) release patterns from the median eminence (ME) (Gillies, 1997; Muller et al, 1999; Tannenbaum et al, 1990). SOM is synthesized in the periventricular nucleus of the hypothalamus (PeVN) and controls in concert with GH-releasing hormone (GHRH) the GH release from the pituitary (Gillies, 1987; Tannenbaum et al, 1990; Terry and Martin, 1981; Zeitler et al, 1991). An altered GH status is reflected in changes in the hypothalamic SOM system. For instance, the number of SOM cells (Sasaki et al, 1997) and pre-pro SOM mRNA levels (Hurley and Phelps, 1992) in the PeVN were elevated in animals overexpressing GH. Several observations suggest that SOM may also affect reproductive function directly at the level of the hypothalamus. -
Engineering Zinc-Finger Protein and CRISPR/Cas9 Constructs to Model the Epigenetic and Transcriptional Phenomena That Underlie Cocaine-Related Behaviors
Engineering zinc-finger protein and CRISPR/Cas9 constructs to model the epigenetic and transcriptional phenomena that underlie cocaine-related behaviors Hamilton PJ, Heller EA, Ortiz Torres I, Burek DD, Lombroso SI, Pirpinias ST, Neve RL, Nestler EJ Multiple studies have implicated genome-wide epigenetic remodeling events in brain reward regions following drug exposure. However, only recently has it become possible to target a given type of epigenetic remodeling to a single gene of interest, in order to probe the causal relationship between such regulation and neuropsychiatric disease (Heller et al., Nat Neurosci, 2014). Our group has successfully utilized synthetic zinc- finger proteins (ZFPs), fused to either the transcriptional repressor, G9a, that promotes histone methylation or the transcriptional activator, p65, that promotes histone acetylation, to determine the behavioral effects of targeted in vivo epigenetic reprogramming in a locus-specific and cell-type specific manner. Given the success of our ZFP approaches, we have broadened our technical repertoire to include the more novel and flexible CRISPR/Cas9 technology. We designed guide RNAs to target nuclease-dead Cas9 (dCas9) fused to effector domains to the fosB gene locus, a locus heavily implicated in the pathogenesis of drug abuse. We observe that dCas9 fused to the transcriptional activator, VP64, or the transcriptional repressor, KRAB, and targeted to specific sites in the fosB promoter is sufficient to regulate FosB and ΔFosB mRNA levels, in both cultured cells and in the nucleus accumbens (NAc) of mice receiving viral delivery of CRISPR constructs. Next, we designed a fusion construct linking the dCas9 moiety to a pseudo-phosphorylated isoform of the transcription factor CREB (dCas9 CREB(S133D)). -
Regulation of the Neuroendocrine Reproductive Axis by Kisspeptin-GPR54 Signaling
REPRODUCTIONREVIEW Regulation of the neuroendocrine reproductive axis by kisspeptin-GPR54 signaling Jeremy T Smith1, Donald K Clifton2 and Robert A Steiner1,2 Departments of 1Physiology and Biophysics and 2Obstetrics and Gynecology, University of Washington, Seattle, Washington 98195-7290, USA Correspondence should be addressed to R A Steiner at Department of Physiology and Biophysics, Health Sciences Building, G-424, School of Medicine, University of Washington, Box no. 357290, Seattle, WA 98195-7290, USA; Email: [email protected] Abstract The Kiss1 gene codes for a family of peptides that act as endogenous ligands for the G protein-coupled receptor GPR54. Spontaneous mutations or targeted deletions of GPR54 in man and mice produce hypogonadotropic hypogonadism and infer- tility. Centrally administered kisspeptins stimulate gonadotropin secretion by acting directly on GnRH neurons. Sex steroids regulate the expression of KiSS-1 mRNA in the brain through direct action on KiSS-1 neurons. In the arcuate nucleus (Arc), sex steroids inhibit the expression of KiSS-1, suggesting that these neurons serve as a conduit for the negative feedback regulation of gonadotropin secretion. In the anteroventral periventricular nucleus (AVPV), sex steroids induce the expression of KiSS-1, implying that KiSS-1 neurons in this region may have a role in the preovulatory LH surge (in the female) or sexual behavior (in the male). Reproduction (2006) 131 623–630 Discovery essential to initiate gonadotropin secretion at puberty and support reproductive function in the adult. GPR54 is a G protein-coupled receptor, which was orig- inally identified as an ‘orphan’ receptor in the rat (Lee et al. 1999). Although GPR54 shares a modest sequence How Kiss1 got its name homology with the known galanin receptors, galanin Investigators at the Pennsylvania State College of Medi- apparently does not bind specifically to this receptor (Lee cine in Hershey, Pennsylvania, discovered the Kiss1 gene. -
Estrogen Receptor-Α Interaction with the CREB Binding Protein
307 Estrogen receptor- interaction with the CREB binding protein coactivator is regulated by the cellular environment B M Jaber, R Mukopadhyay and C L Smith Molecular and Cellular Biology, Baylor College of Medicine, One Baylor Plaza, Houston, Texas 77030, USA (Requests for offprints should be addressed to C L Smith; Email: [email protected]) Abstract The p160 coactivators, steroid receptor coactivator-1 (SRC-1), transcriptional intermediary factor-2 (TIF2) and receptor-associated coactivator-3 (RAC3), as well as the coactivator/integrator CBP, mediate estrogen receptor- (ER)-dependent gene expression. Although these coactivators are widely expressed, ER transcriptional activity is cell-type dependent. In this study, we investigated ER interaction with p160 coactivators and CBP in HeLa and HepG2 cell lines. Basal and estradiol (E2)-dependent interactions between the ER ligand-binding domain (LBD) and SRC-1, TIF2 or RAC3 were observed in HeLa and HepG2 cells. The extents of hormone-dependent interactions were similar and interactions between each of the p160 coactivators and the ER LBD were not enhanced by 4-hydroxytamoxifen in either cell type. In contrast to the situation for p160 coactivators, E2-dependent interaction of the ER LBD with CBP or p300 was detected in HeLa but not HepG2 cells by mammalian two-hybrid and coimmunoprecipitation assays, indicating that the cellular environment modulates ER-CBP/p300 interaction. Furthermore, interactions between CBP and p160 coactivators are much more robust in HeLa than HepG2 cells suggesting that poor CBP-p160 interactions are insufficient to support ER–CBP–p160 ternary complexes important for nuclear receptor–CBP interactions. Alterations in p160 coactivators or CBP expression between these two cell types did not account for differences in ER–p160–CBP interactions. -
Hypothalamus - Wikipedia
Hypothalamus - Wikipedia https://en.wikipedia.org/wiki/Hypothalamus The hypothalamus is a portion of the brain that contains a number of Hypothalamus small nuclei with a variety of functions. One of the most important functions of the hypothalamus is to link the nervous system to the endocrine system via the pituitary gland. The hypothalamus is located below the thalamus and is part of the limbic system.[1] In the terminology of neuroanatomy, it forms the ventral part of the diencephalon. All vertebrate brains contain a hypothalamus. In humans, it is the size of an almond. The hypothalamus is responsible for the regulation of certain metabolic processes and other activities of the autonomic nervous system. It synthesizes and secretes certain neurohormones, called releasing hormones or hypothalamic hormones, Location of the human hypothalamus and these in turn stimulate or inhibit the secretion of hormones from the pituitary gland. The hypothalamus controls body temperature, hunger, important aspects of parenting and attachment behaviours, thirst,[2] fatigue, sleep, and circadian rhythms. The hypothalamus derives its name from Greek ὑπό, under and θάλαμος, chamber. Location of the hypothalamus (blue) in relation to the pituitary and to the rest of Structure the brain Nuclei Connections Details Sexual dimorphism Part of Brain Responsiveness to ovarian steroids Identifiers Development Latin hypothalamus Function Hormone release MeSH D007031 (https://meshb.nl Stimulation m.nih.gov/record/ui?ui=D00 Olfactory stimuli 7031) Blood-borne stimuli -
Circadian- and Sex-Dependent Increases in Intravenous Cocaine Self-Administration in Npas2 Mutant Mice
bioRxiv preprint doi: https://doi.org/10.1101/788786; this version posted October 1, 2019. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. Circadian- and sex-dependent increases in intravenous cocaine self-administration in Npas2 mutant mice Lauren M. DePoy1,2, Darius D. Becker-Krail1,2, Neha M. Shah1, Ryan W. Logan1,2,3, Colleen A. McClung1,2,3 1Department of Psychiatry, Translational Neuroscience Program, University of Pittsburgh School of Medicine 2Center for Neuroscience, University of Pittsburgh 3Center for Systems Neurogenetics of Addiction, The Jackson Laboratory Contact: Lauren DePoy, PhD 450 Technology Dr. Ste 223 Pittsburgh, PA 15219 412-624-5547 [email protected] Running Title: Increased self-administration in female Npas2 mutant mice Key words: circadian, sex-differences, cocaine, self-administration, addiction, Npas2 Abstract: 250 Body: 3996 Figures: 6 Tables: 1 Supplement: 3 Figures Acknowledgements: We Would like to thank Mariah Hildebrand and Laura Holesh for animal care and genotyping. We thank Drs. Steven McKnight and David Weaver for providing the Npas2 mutant mice. This work was funded by the National Institutes of Health: DA039865 (PI: Colleen McClung, PhD) and DA046117 (PI: Lauren DePoy). Disclosures: All authors have no financial disclosures or conflicts of interest to report. 1 bioRxiv preprint doi: https://doi.org/10.1101/788786; this version posted October 1, 2019. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. Abstract Background: Addiction is associated With disruptions in circadian rhythms. -
The Role of Gata2 in Hematopoietic and Vascular Development By
The Role of Gata2 in Hematopoietic and Vascular Development by William D Brandt A dissertation submitted in partial fulfillment of the requirements for the degree of Doctor of Philosophy (Cellular and Molecular Biology) in The University of Michigan 2009 Doctoral Committee: Professor James Douglas Engel, Chair Professor Eric R Fearon Professor Deborah L Gumucio Associate Professor Thomas M Glaser William D Brandt 2009 Dedication To my family, without whom this PhD would never have been possible. ii Acknowledgements The Engel lab and the University of Michigan will always have my deepest gratitude, particularly the lab’s proprietor and my thesis advisor Doug Engel, whose love of science and good nature has always been a source of inspiration. Doug has been instrumental in my growth as a nascent scientist and I will forever be indebted to him. My gratitude also goes to Kim-Chew Lim and Tomo Hosoya, whose wealth of knowledge and support were relied upon regularly. To Deb Gumucio, Tom Glaser, and Eric Fearon, whose advice and support facilitated my maturation from a naïve student to a proficient scientist – thank you. And to Lori Longeway and Kristin Hug, whose capabilities as department representatives I repeatedly put to the test; you came through for me every time. Thank you. Finally, no amount of words can express how truly grateful and indebted I am to my parents and sister – Cary, Kim, and Jenelle. I would not be in this position today without their unerring love and support. iii Table of Contents Dedication ii Acknowledgements iii List of Figures v List of Tables vi Abstract vii Chapter 1. -
Resetting the Biological Clock: Mediation of Nocturnal CREB Phosphorylation Via Light, Glutamate, and Nitric Oxide
The Journal of Neuroscience, January 15, 1997, 17(2):667–675 Resetting the Biological Clock: Mediation of Nocturnal CREB Phosphorylation via Light, Glutamate, and Nitric Oxide Jian M. Ding,1,3 Lia E. Faiman,1 William J. Hurst,1 Liana R. Kuriashkina,2 and Martha U. Gillette1,2,3 1Department of Cell and Structural Biology, 2Molecular and Integrative Physiology, and 3The Neuroscience Program, University of Illinois, Urbana, Illinois 61801 Synchronization between the environmental lighting cycle and neurons in which P-CREB-lir was induced by light were the biological clock in the suprachiasmatic nucleus (SCN) is NADPH-diaphorase-positive neurons of the SCN’s retinorecipi- correlated with phosphorylation of the Ca21/cAMP response ent area. Glu treatment increased the intensity of a 43 kDa band element binding protein (CREB) at the transcriptional activating recognized by anti-P-CREB antibodies in subjective night but site Ser133. Mechanisms mediating the formation of phospho- not day, whereas anti-aCREB-lir of this band remained con- CREB (P-CREB) and their relation to clock resetting are un- stant between night and day. Inhibition of NOS during Glu known. To address these issues, we probed the signaling stimulation diminished the anti-P-CREB-lir of this 43 kDa band. pathway between light and P-CREB. Nocturnal light rapidly and Together, these data couple nocturnal light, Glu, NMDA recep- transiently induced P-CREB-like immunoreactivity (P-CREB-lir) tor activation and NO signaling to CREB phosphorylation in the in the rat SCN. Glutamate (Glu) or nitric oxide (NO) donor transduction of brief environmental light stimulation of the ret- administration in vitro also induced P-CREB-lir in SCN neurons ina into molecular changes in the SCN resulting in phase re- only during subjective night. -
Review Function and Regulation of CREB Family Transcription Factors
Neuron, Vol. 35, 605–623, August 15, 2002, Copyright 2002 by Cell Press Function and Regulation Review of CREB Family Transcription Factors in the Nervous System Bonnie E. Lonze and David D. Ginty1 domain, which is consistent with the findings that these Department of Neuroscience factors can form both homo- and heterodimers, and Howard Hughes Medical Institute that each can bind to the same cis-regulatory element The Johns Hopkins University School of Medicine (reviewed in De Cesare et al., 1999; Mayr and Montminy, Baltimore, Maryland 21205 2001; Shaywitz and Greenberg, 1999). This element, the cAMP response element (CRE), consists of the palin- dromic consensus sequence TGACGTCA. While many CREB and its close relatives are now widely accepted CREB binding sites are comprised of variations of this as prototypical stimulus-inducible transcription fac- consensus motif, almost all harbor the core sequence tors. In many cell types, these factors function as ef- CGTCA. fector molecules that bring about cellular changes in While the bZIP domain mediates DNA binding and response to discrete sets of instructions. In neurons, dimerization, the remaining domains of CREB family a wide range of extracellular stimuli are capable of members serve to facilitate interactions with coactiva- activating CREB family members, and CREB-depen- tors and components of the transcriptional machinery dent gene expression has been implicated in complex that ultimately carry out RNA synthesis. The functional and diverse processes ranging from development to domains of CREB and its relatives (Foulkes et al., 1991; plasticity to disease. In this review, we focus on the Gonzalez et al., 1989; Hai et al., 1989; Hoeffler et al., current level of understanding of where, when, and 1988) are schematically represented in Figure 1. -
High-Frequency Stimulation-Induced Peptide Release Synchronizes
RESEARCH ARTICLE High-frequency stimulation-induced peptide release synchronizes arcuate kisspeptin neurons and excites GnRH neurons Jian Qiu1*†, Casey C Nestor1†, Chunguang Zhang1, Stephanie L Padilla2, Richard D Palmiter2, Martin J Kelly1,3*‡, Oline K Rønnekleiv1,3*‡ 1Department of Physiology and Pharmacology, Oregon Health and Science University, Portland, United States; 2Department of Biochemistry, Howard Hughes Medical Institute, University of Washington, Seattle, United States; 3Division of Neuroscience, Oregon National Primate Research Center, Oregon Health and Science University, Beaverton, United States Abstract Kisspeptin (Kiss1) and neurokinin B (NKB) neurocircuits are essential for pubertal development and fertility. Kisspeptin neurons in the hypothalamic arcuate nucleus (Kiss1ARH) co- express Kiss1, NKB, dynorphin and glutamate and are postulated to provide an episodic, excitatory drive to gonadotropin-releasing hormone 1 (GnRH) neurons, the synaptic mechanisms of which are unknown. We characterized the cellular basis for synchronized Kiss1ARH neuronal activity using optogenetics, whole-cell electrophysiology, molecular pharmacology and single cell RT-PCR in mice. High-frequency photostimulation of Kiss1ARH neurons evoked local release of excitatory *For correspondence: qiuj@ohsu. (NKB) and inhibitory (dynorphin) neuropeptides, which were found to synchronize the Kiss1ARH edu (JQ); [email protected] (MJK); neuronal firing. The light-evoked synchronous activity caused robust excitation of GnRH neurons by [email protected] (OKR) a synaptic mechanism that also involved glutamatergic input to preoptic Kiss1 neurons from †These authors contributed Kiss1ARH neurons. We propose that Kiss1ARH neurons play a dual role of driving episodic secretion equally to this work of GnRH through the differential release of peptide and amino acid neurotransmitters to ‡ These authors also contributed coordinate reproductive function.