Using a B-Phycoerythrin Extract As a Natural Colorant: Application in Milk-Based Products
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University of New Orleans ScholarWorks@UNO University of New Orleans Theses and Dissertations Dissertations and Theses Summer 8-4-2011 Identification and characterization of enzymes involved in the biosynthesis of different phycobiliproteins in cyanobacteria Avijit Biswas University of New Orleans, [email protected] Follow this and additional works at: https://scholarworks.uno.edu/td Part of the Biochemistry, Biophysics, and Structural Biology Commons Recommended Citation Biswas, Avijit, "Identification and characterization of enzymes involved in the biosynthesis of different phycobiliproteins in cyanobacteria" (2011). University of New Orleans Theses and Dissertations. 446. https://scholarworks.uno.edu/td/446 This Dissertation-Restricted is protected by copyright and/or related rights. It has been brought to you by ScholarWorks@UNO with permission from the rights-holder(s). You are free to use this Dissertation-Restricted in any way that is permitted by the copyright and related rights legislation that applies to your use. For other uses you need to obtain permission from the rights-holder(s) directly, unless additional rights are indicated by a Creative Commons license in the record and/or on the work itself. This Dissertation-Restricted has been accepted for inclusion in University of New Orleans Theses and Dissertations by an authorized administrator of ScholarWorks@UNO. For more information, please contact [email protected]. Identification and characterization of enzymes involved in biosynthesis of different phycobiliproteins in cyanobacteria A Thesis Submitted to the Graduate Faculty of the University of New Orleans in partial fulfillment of the requirements for the degree of Doctor of Philosophy In Chemistry (Biochemistry) By Avijit Biswas B.S. -
Extractuion, Partial Pirificatuon and Anti
J. Algal Biomass Utln. 2012, 3 (3): 7– 11 Purification, and antibacterial activity of phycocyanin from Spirulina © PHYCO SPECTRUM INC Extraction, partial purification, and antibacterial activity of phycocyanin from Spirulina isolated from fresh water body against various human pathogens M. Muthulakshmi, A. Saranya, M. Sudha, and G. Selvakumar* Department of Microbiology and Biochemistry, Nadar Saraswathi College of Arts & Science, Theni 625531, Tamil Nadu, India *Department of Microbiology, Department of Distance Education, Alagappa University, Karaikudi, Tamil Nadu, India ABSTRACT The phycobilin pigments are intensively fluorescence and water soluble. They are categorized into three types: pigments containing high energies (phycoerythrins), intermediate energies (phycocyanins), and low energies (allophycocyanins). Among them, crude-phycocyanin (c-pc) has been considered to be the most preferred one. The present study was undertaken to evaluate the antibacterial activity of c-pc which was isolated from the blue green algae Spirulina platensis. C-pc was extracted by sonication, followed by centrifugation and filtration. The crude form of phycocyanin was purified by ammonium sulphate precipitation, membrane filtration, and dialysis method. Antibacterial activities were obtained from various human pathogens. The results showed that all Spirulina maxima extracts exhibited great potential antibacterial activities against five bacterial strains with inhibition zones of range 7–13 mm. Key words: Spirulina maxima, c-phycocyanin, antibacterial activity INTRODUCTION the cells enclosed in a thin sheath. Spirulina has a Microalgae are a very diverse group of organisms very long history of being served as a source of food that consist of both prokaryotic and eukaryotic for human being. forms. Although most microalgae are phototropic some species are also capable of showing Spirulina is a spiral filament generally found in heterotrophic growth. -
Photosynthetic Characteristics of Phycoerythrin- Containing Marine Synechococcus Spp
MARINE ECOLOGY - PROGRESS SERIES Vol. 39: 191-196, 1987 Published August 24 Mar. Ecol. Prog. Ser. I Photosynthetic characteristics of phycoerythrin- containing marine Synechococcus spp. 11. Time course responses of photosynthesis to ph.otoinhibition R. G.Barlow. R. S. ~lberte' Department of Molecular Genetics and Cell Biology, Barnes Laboratory, The University of Chicago, 5630 S. Ingleside Avenue, Chicago, Illinois 60637, USA ABSTRACT Marine Synechococcus spp. optimize growth and photosynthesis at low light levels and show photoinhibition of photosynthesis at high levels. We exam~nedthe photosynthetic response to, and recovery from, exposure to photoinhibitory light levels after growth at low photon flux densities in 2 clones of Synechococcus spp. Clones WH 7803 and WH 8018 were grown at 25 pE m-' S-', exposed to photoinhibitory light (1500 pE m-' S-') for 3 h, and then returned to the growth light level. Clone WH 7803 showed a 40 % decrease in P,,, while Clone WH 8018 showed a 30 % decrease during the exposure. This was accompanied by a proportional increase in whole-cell phycoerythrin fluorescence and by a decrease in the cellular content of P700, the photochemical reaction center of Photosystem I. On return to low light, photochemically active P700 recovered to pre-photoinhibitory levels within 1 h in Clone WH 8018 and within 2 h in Clone WH 7803. Photosynthetic rates and phycoerythrin fluorescence required 2 to 3 h and 3 to 4 h to recover in Clones WH 8018 and WH 7803, respectively. During exposure and recovery, no changes in cellular levels of chlorophyll or phycobiliproteins were observed. It is concluded that (1) the primary deleterious effect of photoinhibition of photosynthesis was reversible losses in Photosystem I activity, and (2) recovery from photoinhibition was rapid and occurred within hours. -
Nobel Lecture by Roger Y. Tsien
CONSTRUCTING AND EXPLOITING THE FLUORESCENT PROTEIN PAINTBOX Nobel Lecture, December 8, 2008 by Roger Y. Tsien Howard Hughes Medical Institute, University of California San Diego, 9500 Gilman Drive, La Jolla, CA 92093-0647, USA. MOTIVATION My first exposure to visibly fluorescent proteins (FPs) was near the end of my time as a faculty member at the University of California, Berkeley. Prof. Alexander Glazer, a friend and colleague there, was the world’s expert on phycobiliproteins, the brilliantly colored and intensely fluorescent proteins that serve as light-harvesting antennae for the photosynthetic apparatus of blue-green algae or cyanobacteria. One day, probably around 1987–88, Glazer told me that his lab had cloned the gene for one of the phycobilipro- teins. Furthermore, he said, the apoprotein produced from this gene became fluorescent when mixed with its chromophore, a small molecule cofactor that could be extracted from dried cyanobacteria under conditions that cleaved its bond to the phycobiliprotein. I remember becoming very excited about the prospect that an arbitrary protein could be fluorescently tagged in situ by genetically fusing it to the phycobiliprotein, then administering the chromophore, which I hoped would be able to cross membranes and get inside cells. Unfortunately, Glazer’s lab then found out that the spontane- ous reaction between the apoprotein and the chromophore produced the “wrong” product, whose fluorescence was red-shifted and five-fold lower than that of the native phycobiliprotein1–3. An enzyme from the cyanobacteria was required to insert the chromophore correctly into the apoprotein. This en- zyme was a heterodimer of two gene products, so at least three cyanobacterial genes would have to be introduced into any other organism, not counting any gene products needed to synthesize the chromophore4. -
33 Subunit of R-Phycoerythrin from Gracilaria Chilensis Has a Typical Double Linked Phycourobilin Similar to Γ Subunit
RESEARCH ARTICLE The γ33 subunit of R-phycoerythrin from Gracilaria chilensis has a typical double linked phycourobilin similar to γ subunit Aleikar VaÂsquez-SuaÂrez1☯, Francisco Lobos-GonzaÂlez1☯, Andrew Cronshaw2, Jose Sepu lveda-Ugarte1, Maximiliano Figueroa1, Jorge Dagnino-Leone1, Marta Bunster1*, Jose MartõÂnez-Oyanedel1* 1 Laboratorio de BiofõÂsica Molecular, Departamento de BioquõÂmica y BiologõÂa Molecular, Facultad de Ciencias BioloÂgicas Universidad de ConcepcioÂn, ConcepcioÂn, Chile, 2 Michael Swann Building, Kings' a1111111111 Buildings, University of Edinburgh, Edinburgh, Scotland, United Kingdom a1111111111 a1111111111 ☯ These authors contributed equally to this work. a1111111111 * [email protected] (MB); [email protected] (JM-O) a1111111111 Abstract Phycobilisomes (PBS) are accessory light harvesting protein complexes formed mainly by OPEN ACCESS phycobiliproteins (PBPs). The PBPs absorb light that is efficiently transferred to Photosys- Citation: VaÂsquez-SuaÂrez A, Lobos-GonzaÂlez F, tems due to chromophores covalently bound to specific cysteine residues. Besides phycobi- Cronshaw A, SepuÂlveda-Ugarte J, Figueroa M, liproteins (PE), the PBS contains linker proteins responsible for assembly and stabilization 33 Dagnino-Leone J, et al. (2018) The γ subunit of of the whole complex and the tuning of energy transfer steps between chromophores. The R-phycoerythrin from Gracilaria chilensis has a 33 typical double linked phycourobilin similar to γ linker (γ ) from Gracilaria chilensis, is a chromophorylated rod linker associated to (αβ)6 subunit. PLoS ONE 13(4): e0195656. https://doi. hexamers of R-phycoerythrin (R-PE). Its role in the energy transfer process is not clear yet. org/10.1371/journal.pone.0195656 Structural studies as well as the composition and location of the chromophores are essential Editor: Peter Butko, Nagoya University, JAPAN to understand their involvement in the energy transfer process in PBS. -
Coexistence of Phycoerythrin and a Chlorophyll A/B Antenna in a Marine Prokaryote (Prochlorophyta/Cyanobacteria/Phycobilins/Photosynthesis/Endosymbiosis) WOLFGANG R
Proc. Natl. Acad. Sci. USA Vol. 93, pp. 11126-11130, October 1996 Microbiology Coexistence of phycoerythrin and a chlorophyll a/b antenna in a marine prokaryote (Prochlorophyta/cyanobacteria/phycobilins/photosynthesis/endosymbiosis) WOLFGANG R. HESs*t, FREDEIRIC PARTENSKYt, GEORG W. M. VAN DER STAAYI, JOSE' M. GARCIA-FERNANDEZt, THOMAS BORNER*, AND DANIEL VAULOTt *Department of Biology, Humboldt-University, Chausseestrasse 117, D-10115 Berlin, Germany; and tStation Biologique de Roscoff, Centre National de la Recherche Scientifique Unite Propre de Recherche 9042 and Universite Pierre et Marie Curie, BP 74, F-29682 Roscoff Cedex, France Communicated by Hewson Swift, The University of Chicago, Chicago, IL, July 1Z 1996 (received for review June 7, 1996) ABSTRACT Prochlorococcus marinus CCMP 1375, a ubiq- tation maximum of the major chromophore bound by PE-III uitous and ecologically important marine prochlorophyte, corresponds to that of phycourobilin. was found to possess functional genes coding for the a and 1 subunits of a phycobiliprotein. The latter is similar to phy- coerythrins (PE) from marine Synechococcus cyanobacteria MATERIALS AND METHODS and bind a phycourobilin-like pigment as the major chro- Flow Cytometric Measurements. Sea water samples were mophore. However, differences in the sequences of the ca and collected at different depths during the France-Joint Global 13 chains compared with known PE subunits and the presence Ocean Flux Study OLIPAC cruise held in November 1994 of a single bilin attachment site on the a subunit designate it aboard the N.O. l'Atalante. Samples were analyzed immedi- as a novel PE type, which we propose naming PE-III. P. ately using a FACScan (Becton Dickinson) flow cytometer and marinus is the sole prokaryotic organism known so far that cell concentrations of Prochlorococcus and Synechococcus contains chlorophylls a and b as well as phycobilins. -
Phycobiliprotein Evolution (Phycoerythrin/Phycobilisomes/Cell Wall/Photosynthesis/Prokaryotic Evolution) THOMAS A
Proc. Natd Acad. Sci. USA Vol. 78, No. 11, pp. 6888-6892, November 1981 Botany Morphology of a novel cyanobacterium and characterization of light-harvesting complexes from it: Implications for phycobiliprotein evolution (phycoerythrin/phycobilisomes/cell wall/photosynthesis/prokaryotic evolution) THOMAS A. KURSAR*, HEWSON SwIFTt, AND RANDALL S. ALBERTEt tBarnes Laboratory, Department ofBiology, and *Department of Biophysics and Theoretical Biology, University of Chicago, Chicago, Illinois 60637 Contributed by Hewson Swift, July 2, 1981 ABSTRACT The morphology of the marine cyanobacterium After examining the in vivo spectral properties of several of DC-2 and two light-harvesting complexes from it have been char- the recently discovered species ofcyanobacteria, it came to our acterized. DC-2 has an outer cell wall sheath not previously ob- attention that one of the PE-containing types termed DC-2 served, the purified phycoerythrin shows many unusual proper- showed some rather unusual features. Further study revealed ties that distinguish it from all phycoerythrins characterized to that this species possesses novel PE, phycobilisomes, and outer date, and isolated phycobilisomes have a single absorption band cell wall sheath; these characteristics suggest that it should be at 640 nm in the phycocyanin-allophycocyanin region of the spec- trum. On the basis of these observations we suggest that DC-2, placed in a new phylogenetic branch for the cyanobacteria. rather than being a member of the Synechococcus group, should be placed in its own taxonomic group. In addition, the particular MATERIALS AND METHODS properties of the isolated phycoerythrin suggest that it may be An axenic representative of an early stage in the evolution of the phyco- isolate of Synechococcus sp., clone DC-2, obtained erythrins. -
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AQUATIC MICROBIAL ECOLOGY Published April 28 Aquat microb Ecol Effects of light on pigments and photosynthetic activity in a phycoerythrin-rich strain of Spirulina subsalsa L. Tomaselli, M. C. Margheri, A. Sacchi Centro di Studio dei Microrganismi Autotrofi del CNR. P. le delle Cascine, 1-27-50144 Firenze, Italy ABSTRACT: Data on acclimation to 2 photon flux densities (15 and 100 pm01 photons m-2 S-') in Spir- ulina subsalsa strain 3F, a highly fluorescent phycoerythrin-rich cyanobacterium isolated from the brackish Lake Faro (Messina, Italy), indicated plasticity of the photosynthetlc apparatus of this organ- Ism. High-irradiance grown cells showed the greatest photosynthetlc capacity even though they had a lower chlorophyll and phycobiliprotein content. Carotenoids decreased to a lesser extent but their com- position changed. b-carotene decreased, while the amount of myxoxanthophyll more than doubled. The stability of both C-phycoerythrin and C-phycocyanin ratios in cells grown under different light quality (green and red) demonstrated the lack of complementary chromatic adaptation in S. subsalsa. This factor, combined with the efficient utilization of low-wavelength light, indicates the strong adap- tation of this strain to its habitat. KEY WORDS: Pigments . Oxygen evolution . Photoacclimation . Spirulina subsalsa . Cyanobacteria INTRODUCTION lar strain. Our results, besides contributing to the understanding of photoadaption in S. subsalsa, could Cyanobacteria of the genus Spirulina Turpin are fre- provide useful information for the possible exploitation quently found in thermal springs and in brackish or of this strain as a source of natural fluorescent dye in marine waters, mostly eutrophic, where they can form immunofluorescent assays (Strier et al. -
An Early Requisite for Efficient Photosynthesis in Cyanobacteria
EXCLI Journal 2015;14:268-289 – ISSN 1611-2156 Received: December 16, 2014, accepted: January 16, 2015, published: February 20, 2015 Original article: THE PHYCOBILISOMES: AN EARLY REQUISITE FOR EFFICIENT PHOTOSYNTHESIS IN CYANOBACTERIA Niraj Kumar Singh1,$, Ravi Raghav Sonani2,$, Rajesh Prasad Rastogi2,*, Datta Madamwar2,* 1 Shri A. N. Patel PG Institute (M. B. Patel Science College Campus), Anand, Sardargunj, Anand – 388001, Gujarat, India 2 BRD School of Biosciences, Sardar Patel Maidan, Vadtal Road, Post Box No. 39, Sardar Patel University, Vallabh Vidyanagar 388 120, Anand, Gujarat, India * Corresponding authors: Tel.: +91 02692 229380; fax: +91 02692 231042/236475; E-mail addresses: [email protected] (R.P. Rastogi), [email protected] (D. Madamwar) $ These authors have contributed equally. http://dx.doi.org/10.17179/excli2014-723 This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/). ABSTRACT Cyanobacteria trap light energy by arrays of pigment molecules termed “phycobilisomes (PBSs)”, organized proximal to "reaction centers" at which chlorophyll perform the energy transduction steps with highest quantum efficiency. PBSs, composed of sequential assembly of various chromophorylated phycobiliproteins (PBPs), as well as nonchromophoric, basic and hydrophobic polypeptides called linkers. Atomic resolution structure of PBP is a heterodimer of two structurally related polypeptides but distinct specialised polypeptides- α and β, made up of seven alpha-helices each which played a crucial step in evolution of PBPs. PBPs carry out various light de- pendent responses such as complementary chromatic adaptation. The aim of this review is to summarize and discuss the recent progress in this field and to highlight the new and the questions that remain unresolved. -
Phycobiliproteins and Tandem Conjugates
Phycobiliproteins & Tandem Conjugates Multicolor Flow Cytometric Detection with Superior Fluorescence AAT Bioquest® Overview of Phycobiliproteins Phycobiliproteins are a family of photosynthetic light-harvesting proteins derived from microalgae and cyanobacteria. These proteins contain covalently attached linear tetrapyrrole groups, known as phycobilins, which play a critical role in capturing light energy. In microalgae and cyanobacteria, energy absorbed by these phycobilins is efficiently transferred via fluorescence resonance energy transfer (FRET), to chlorophyll pigments for their use in photosynthetic reactions (Figure 1). Because phycobiliproteins have extremely high fluorescence quantum yields and absorbance coefficients over a wide spectral range, they serve as valuable fluorescent tags in a variety of fluorescence applications, primarily flow cytometry. Phycobiliproteins conjugated to molecules having biological specificity (e.g. immunoglobulin, protein A or streptavidin) are effective tools in fluorescence activated cell sorting (FACS), imaging, immunophenotyping and immunoassay applications. Compared to organic and synthetic fluorescent dyes, phycobiliproteins offer several advantages when used as fluorescent probes, including: • Intense long-wavelength excitation and emission profiles to minimize auto-fluorescence from biological materials • Minimal fluorescence quenching contributed by the covalent binding of phycobilins to the protein backbone • Highly water-soluble to facilitate chemical manipulation for conjugation reactions -
Two Classes of Pigments, Carotenoids and C-Phycocyanin, in Spirulina Powder and Their Antioxidant Activities
molecules Article Two Classes of Pigments, Carotenoids and C-Phycocyanin, in Spirulina Powder and Their Antioxidant Activities Woo Sung Park 1,†, Hye-Jin Kim 1,†, Min Li 2, Dong Hoon Lim 3, Jungmin Kim 4, Sang-Soo Kwak 5, Chang-Min Kang 4, Mario G. Ferruzzi 2,* and Mi-Jeong Ahn 1,* ID 1 College of Pharmacy and Research Institute of Pharmaceutical Sciences, Gyeongsang National University, Jinju 52828, Korea; [email protected] (W.S.P.); [email protected] (H.-J.K.) 2 Plants for Human Health Institute, North Carolina State University, Kannapolis, NC 28081, USA; [email protected] 3 Department of Information and Statistics and RINS, Gyeongsang National University, Jinju 52828, Korea; [email protected] 4 Korea Institute of Toxicology, Jinju 52834, Korea; [email protected] (J.K.); [email protected] (C.-M.K.) 5 Plant Systems Engineering Research Center, Korea Research Institute of Bioscience and Biotechnology, Daejeon 34141, Korea; [email protected] * Correspondence: [email protected] (M.G.F.); [email protected] (M.-J.A.); Tel.: +82-55-772-2425 (M.-J.A.) † Both first authors contributed equally to this work. Received: 24 July 2018; Accepted: 15 August 2018; Published: 17 August 2018 Abstract: Arthrospira platensis is the widely available source of spirulina that contains distinctive natural pigments, including carotenoids and C-phycocyanin (C-PC). In this study, the major carotenoid and C-PC contents were determined in seven commercially available spirulina powder products and laboratory-prepared A. platensis trichomes (AP-1) by an LC-DAD method and UV-Visible spectrometry, respectively. The correlation of these two pigment content levels with Hunter color coordinates and antioxidant activity was also evaluated. -
Phycocyanin-Specific Absorption Coefficient: Eliminating the Effect of Chlorophylls Absorption
CORE Metadata, citation and similar papers at core.ac.uk Provided by UNL | Libraries University of Nebraska - Lincoln DigitalCommons@University of Nebraska - Lincoln Papers in Natural Resources Natural Resources, School of 2015 Phycocyanin-specific ba sorption coefficient: Eliminating the effect of chlorophylls absorption Y. Z. Yacobi Kinneret Limnological Laboratory J. Köhler Leibniz Institut für Gewässerökologie und Binnenfischerei F. Leunert Leibniz Institut für Gewässerökologie und Binnenfischerei Anatoly A. Gitelson University of Nebraska - Lincoln, [email protected] Follow this and additional works at: http://digitalcommons.unl.edu/natrespapers Part of the Natural Resources and Conservation Commons, Natural Resources Management and Policy Commons, and the Other Environmental Sciences Commons Yacobi, Y. Z.; Köhler, J.; Leunert, F.; and Gitelson, Anatoly A., "Phycocyanin-specific bsa orption coefficient: Eliminating the effect of chlorophylls absorption" (2015). Papers in Natural Resources. 594. http://digitalcommons.unl.edu/natrespapers/594 This Article is brought to you for free and open access by the Natural Resources, School of at DigitalCommons@University of Nebraska - Lincoln. It has been accepted for inclusion in Papers in Natural Resources by an authorized administrator of DigitalCommons@University of Nebraska - Lincoln. LIMNOLOGY and Limnol. Oceanogr.: Methods 13, 2015, 157–168 OCEANOGRAPHY: METHODS VC 2015 Association for the Sciences of Limnology and Oceanography doi: 10.1002/lom3.10015 Phycocyanin-specific absorption