Solenodon Paradoxus); a Quantitative Study of an Endangered Caribbean Mammal
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Interglacial Refugia Preserved High Genetic Diversity of the Chinese Mole Shrew in the Mountains of Southwest China
Heredity (2016) 116, 23–32 & 2016 Macmillan Publishers Limited All rights reserved 0018-067X/16 www.nature.com/hdy ORIGINAL ARTICLE Interglacial refugia preserved high genetic diversity of the Chinese mole shrew in the mountains of southwest China KHe1,2, N-Q Hu1,3, X Chen4,5, J-T Li6 and X-L Jiang1 The mountains of southwest China (MSC) harbor extremely high species diversity; however, the mechanism behind this diversity is unknown. We investigated to what degree the topography and climate change shaped the genetic diversity and diversification in these mountains, and we also sought to identify the locations of microrefugia areas in these mountains. For these purposes, we sampled extensively to estimate the intraspecific phylogenetic pattern of the Chinese mole shrew (Anourosorex squamipes)in southwest China throughout its range of distribution. Two mitochondrial genes, namely, cytochrome b (CYT B) and NADH dehydrogenase subunit 2 (ND2), from 383 archived specimens from 43 localities were determined for phylogeographic and demographic analyses. We used the continuous-diffusion phylogeographic model, extensive Bayesian skyline plot species distribution modeling (SDM) and approximate Bayesian computation (ABC) to explore the changes in population size and distribution through time of the species. Two phylogenetic clades were identified, and significantly higher genetic diversity was preserved in the southern subregion of the mountains. The results of the SDM, continuous-diffusion phylogeographic model, extensive Bayesian skyline plot and ABC analyses were congruent and supported that the Last Interglacial Maximum (LIG) was an unfavorable period for the mole shrews because of a high degree of seasonality; A. squamipes survived in isolated interglacial refugia mainly located in the southern subregion during the LIG and rapidly expanded during the last glacial period. -
Controlling the Eastern Mole
Agriculture and Natural Resources FSA9095 Controlling the Eastern Mole Dustin Blakey Introduction known about the Eastern Mole, and County Extension Agent successful control in landscapes Agriculture Few things in this world are requires a basic understanding of more frustrating than spending valu their biology. able time and money on a landscape Rebecca McPeake only to have it torn up by wildlife. Mole Biology Associate Professor and Moles’ underground habits aerate the Extension Wildlife soil and reduce grubs, but their Moles spend most of their lives Specialist digging is cause for homeowner underground feeding on invertebrate complaints, making them one of the animals living in the soil. A mole’s most destructive mammals that can diet sharply reflects the diversity of inhabit our landscapes. the fauna found in its environment. In Arkansas, moles primarily feed on earthworms, grubs and other inverte brates. Moles lack the dental struc ture to chew plant material (seeds, roots, etc.) for food and, as a result, subsist strictly as carnivores. Occasionally moles will cut surface vegetation and bring it down to their nest, as bedding, but this is not eaten. Figure 1. Rarely seen on the surface, moles are uniquely designed for their underground existence. Photo printed with permission by Ann and Rob Simpson. Contrary to popular belief, moles are not rodents. Mice, squirrels and gophers are all rodents. Moles are insectivores in the family Talpidae. Figure 2. Moles lack the dental structure This animal family survives by to chew plant material and subsist feeding on invertebrate prey. There mostly on earthworms and other invertebrates. are seven species of moles in North America, but the Eastern Mole Moles are well-adapted to living (Scalopus aquaticus L.) is the species underground. -
In Search of the Extinct Hutia in Cave Deposits of Isla De Mona, P.R. by Ángel M
In Search of the Extinct Hutia in Cave Deposits of Isla de Mona, P.R. by Ángel M. Nieves-Rivera, M.S. and Donald A. McFarlane, Ph.D. Isolobodon portoricensis, the extinct have been domesticated, and its abundant (14C) date was obtained on charcoal and Puerto Rican hutia (a large guinea-pig like remains in kitchen middens indicate that it bone fragments from Cueva Negra, rodent), was about the size of the surviving formed part of the diet for the early settlers associated with hutia bones (Frank, 1998). Hispaniolan hutia Plagiodontia (Rodentia: (Nowak, 1991; Flemming and MacPhee, This analysis yielded an uncorrected 14C age Capromydae). Isolobodon portoricensis was 1999). This species of hutia was extinct, of 380 ±60 before present, and a corrected originally reported from Cueva Ceiba (next apparently shortly after the coming of calendar age of 1525 AD, (1 sigma range to Utuado, P.R.) in 1916 by J. A. Allen (1916), European explorers, according to most 1480-1655 AD). This date coincides with the and it is known today only by skeletal remains historians. final occupation of Isla de Mona by the Taino from Hispaniola (Dominican Republic, Haiti, The first person to take an interest in the Indians (1578 AD; Wadsworth 1977). The Île de la Gonâve, ÎIe de la Tortue), Puerto faunal remains of the caves of Isla de Mona purpose of this article is to report some new Rico (mainland, Isla de Mona, Caja de was mammalogist Harold E. Anthony, who paleontological discoveries of the Puerto Muertos, Vieques), the Virgin Islands (St. in 1926 collected the first Puerto Rican hutia Rican hutia in cave deposits of Isla de Mona Croix, St. -
EDGE of EXISTENCE 1Prioritising the Weird and Wonderful 3Making an Impact in the Field 2Empowering New Conservation Leaders A
EDGE OF EXISTENCE CALEB ON THE TRAIL OF THE TOGO SLIPPERY FROG Prioritising the Empowering new 10 weird and wonderful conservation leaders 1 2 From the very beginning, EDGE of Once you have identified the animals most in Existence was a unique idea. It is the need of action, you need to find the right people only conservation programme in the to protect them. Developing conservationists’ world to focus on animals that are both abilities in the countries where EDGE species YEARS Evolutionarily Distinct (ED) and Globally exist is the most effective and sustainable way to Endangered (GE). Highly ED species ensure the long-term survival of these species. have few or no close relatives on the tree From tracking wildlife populations to measuring of life; they represent millions of years the impact of a social media awareness ON THE of unique evolutionary history. Their campaign, the skill set of today’s conservation GE status tells us how threatened they champions is wide-ranging. Every year, around As ZSL’s EDGE of Existence conservation programme reaches are. ZSL conservationists use a scientific 10 early-career conservationists are awarded its first decade of protecting the planet’s most Evolutionarily framework to identify the animals that one of ZSL’s two-year EDGE Fellowships. With Making an impact are both highly distinct and threatened. mentorship from ZSL experts, and a grant to set in the field Distinct and Globally Endangered animals, we celebrate 10 The resulting EDGE species are unique up their own project on an EDGE species, each 3 highlights from its extraordinary work animals on the verge of extinction – the Fellow gains a rigorous scientific grounding Over the past decade, nearly 70 truly weird and wonderful. -
Independent Evolutionary Histories in Allopatric Populations of a Threatened Caribbean Land Mammal
Article type: Biodiversity Research Independent evolutionary histories in allopatric populations of a threatened Caribbean land mammal Samuel T. Turvey1, Stuart Peters2*, Selina Brace3*, Richard P. Young4, Nick Crumpton3,5, James Hansford1,6, Jose M. Nuñez-Miño4, Gemma King7, Katrina Tsalikidis7, José A. Ottenwalder8, Adrian Timpson9, Stephan M. Funk10,11, Jorge L. Brocca12, Mark G. Thomas2 and Ian Barnes3 1Institute of Zoology, Zoological Society of London, Regent’s Park, London NW1 4RY, UK, 2Research Department of Genetics, Evolution and Environment, University College London, Gower Street, London WC1E 6BT, UK, 3Natural History Museum, Cromwell Road, London SW7 5BD, UK, 4Durrell Wildlife Conservation Trust, Les Augrès Manor, Trinity, Jersey JE3 5BP, Channel Islands, 5Research Department of Cell and Developmental Biology, University College London, Gower Street, London WC1E 6BT, UK, 6Ocean and Earth Science, National Oceanography Centre Southampton, University of Southampton Waterfront Campus, European Way, Southampton, UK, 7School of Biological Sciences, Royal Holloway University of London, Egham Hill, Egham TW20 OEX, UK, 8Mahatma Gandhi 254, Gazcue, Santo Domingo, Dominican Republic, 9Institute of Archaeology, University College London, Gordon Square, London WC1H 0PY, UK, 10Nature Heritage, St. Lawrence, Jersey, Channel Islands, 11Universidad de Temuco UCT, Casilla 15-D, Rudecindo Ortega 02950, Temuco, Chile, 12Sociedad Ornitológica de la Hispaniola, Parque Zoologico Nacional, Avenida de la Vega Real, Arroyo Hondo, Santo Domingo, Dominican Republic *Correspondence: [email protected], [email protected] Running title: Evolutionary history of Hispaniolan solenodon populations 1 ABSTRACT Aim To determine the evolutionary history, relationships and distinctiveness of allopatric populations of Hispaniolan solenodon (Solenodon paradoxus), a highly threatened Caribbean “relict” mammal, to understand spatiotemporal patterns of gene flow and the distribution of diversity across complex large island landscapes and inform spatial conservation prioritization. -
An Evolutionary View on the Japanese Talpids Based on Nucleotide Sequences
Mammal Study 30: S19–S24 (2005) © the Mammalogical Society of Japan An evolutionary view on the Japanese talpids based on nucleotide sequences Akio Shinohara1,*, Kevin L. Campbell2 and Hitoshi Suzuki3 1 Department of Bio-resources, Division of Biotechnology, Frontier Science Research Center, University of Miyazaki, Miyazaki 889-1692, Japan 2 Department of Zoology, University of Manitoba, Winnipeg, Manitoba, R3T 2N2, Canada 3 Graduate School of Environmental Earth Science, Hokkaido University, Hokkaido 060-0810, Japan Abstract. Japanese talpid moles exhibit a remarkable degree of species richness and geographic complexity, and as such, have attracted much research interest by morphologists, cytogeneticists, and molecular phylogeneticists. However, a consensus hypothesis pertaining to the evolutionary history and biogeography of this group remains elusive. Recent phylogenetic studies utilizing nucleotide sequences have provided reasonably consistent branching patterns for Japanese talpids, but have generally suffered from a lack of closely related South-East Asian species for sound biogeographic interpretations. As an initial step in achieving this goal, we constructed phylogenetic trees using publicly accessible mitochondrial and nuclear sequences from seven Japanese taxa, and those of related insular and continental species for which nucleotide data is available. The resultant trees support the view that four lineages (Euroscaptor mizura, Mogera tokuade species group [M. tokudae and M. etigo], M. imaizumii, and M. wogura) migrated separately, and in this order, from the continental Asian mainland to Japan. The close relationship of M. tokudae and M. etigo suggests these lineages diverged recently through a vicariant event between Sado Island and Echigo plain. The origin of the two endemic lineages of Japanese shrew-moles, Urotrichus talpoides and Dymecodon pilirostris, remains ambiguous. -
Ecologia De Les Illes
Observations on the habitat and ecology of the Hispaniolan Solenodon (Solenodon paradoxus) in the Dominican Republic Jose A. OTTENWALDER Proyecto Biodiversidad GEF-PNUD/ONAPLAN. Programa de las Naciones para el Desarrollo (PNUD) y Oficina Nacional de Planificacion. Apartado 1424, Mirador Sur. Santo Domingo, Republica Dominicana Ottenwalder, J.A. 1999. Observations on the habitat and ecology of the Hispaniolan Solenodon (Solenodon paradoxus) in the Dominican Republic. Mon. Soc. Hist. Nat. Balears, 6 I Mon. Inst. Est. Bal. 66: 123-168. ISBN: 84- 87026-86-9. Palma de Mallorca. The habitat of the Hispaniolan Solenodon (Solenodon paradoxus) was investiga ted in the Dominican Republic in relation to particular environmental parameters (geomorphology, geologicalstructure, soil type, elevation, life zone, vegetation, rainfall, and temperature). Results are discussed in relation to relevant species environment interactions, particularly habitat preferences and life history patterns of the species. Comparisons on the habitat, ecology and life history are made bet ween S. paradoxus and the Cuban Solenodon (S. cubanus), the only other living member of the genus. Keywords: Solenodon, Caribbean, Antilles, Ecology, Conservation Biology. Observaciones sobre el habitat y ecologia del Solenodon de la Hispaniola (Solenodon paradox us) en la Republica Dominicana. EI habitat del Solenodon de la Hispaniola (Solenodon paradoxus) fue estudiado en la Republica Dominicana en relacion a una serie de parametres ambientales (geomorfologia, estructura geologica, tipo de suelo, elevacion, zona de vida, for macion vegetal, precipitacion, y temperatura). Las relaciones especie-habitat son analizadas usando un modelo empirico descriptivo. Las observaciones sobre inte racciones especie-rnedio ambiente resultantes son discutidas particularmente en relacion a preferencias aparentes de habitat y a los patrones de historia natural de la especie. -
The First Record of Anourosorex (Insectivora, Soricidae) from Western Myanmar, with Special Reference to Identification and Karyological Characters
Bull. Natl. Mus. Nat. Sci., Ser. A, 40(2), pp. 105–109, May 22, 2014 The First Record of Anourosorex (Insectivora, Soricidae) from Western Myanmar, with Special Reference to Identification and Karyological Characters Shin-ichiro Kawada1, Nozomi Kurihara1, Noriko Tominaga2 and Hideki Endo3 1 Department of Zoology, National Museum of Nature and Science, 4–1–1 Amakubo, Tsukuba, Ibaraki 305–0005, Japan E-mail: [email protected] 2 Adachi Study Center, The Open University of Japan, 5–13–5 Senju, Adachi-ku, Tokyo 120–0034, Japan 3 The University Museum, The University of Tokyo, 7–3–1 Hongo, Bunkyo, Tokyo 113–0033, Japan (Received 3 March 2014; accepted 26 March 2014) Abstract We collected six mole shrews in Tiddim Town of Chin State, western Myanmar. They were captured in a human-modified artificial environment, although mole shrews usually inhabit forests. External and skull measurements indicated that the species was Anourosorex assamensis, previously known only as an endemic species of the Assam region of India. This is the first record of this species from Myanmar. Karyological examination revealed the species was diploid with a fundamental autosomal number of 2n=50 and NFa=96. These numbers correspond to the Taiwanese species A. yamashinai, but several differences were apparent in chromosomal morphology and the position of secondary chromosomal constrictions. The karyological information suggests A. assamensis is a full species separate from A. squamipes in China. Key words : Mole shrew, Anourosorex assamensis, morphological identification, karyotype. karyotypes, and should therefore be considered Introduction separate species. After that, Hutterer (2005) Mole shrews, the genus Anourosorex Milne- reclassified all four Anourosorex as four distinct Edwards, 1872, are semifossorial shrews known species based on size differences. -
Morphological Diversity in Tenrecs (Afrosoricida, Tenrecidae)
Morphological diversity in tenrecs (Afrosoricida, Tenrecidae): comparing tenrec skull diversity to their closest relatives Sive Finlay and Natalie Cooper School of Natural Sciences, Trinity College Dublin, Dublin, Ireland Trinity Centre for Biodiversity Research, Trinity College Dublin, Dublin, Ireland ABSTRACT It is important to quantify patterns of morphological diversity to enhance our un- derstanding of variation in ecological and evolutionary traits. Here, we present a quantitative analysis of morphological diversity in a family of small mammals, the tenrecs (Afrosoricida, Tenrecidae). Tenrecs are often cited as an example of an ex- ceptionally morphologically diverse group. However, this assumption has not been tested quantitatively. We use geometric morphometric analyses of skull shape to test whether tenrecs are more morphologically diverse than their closest relatives, the golden moles (Afrosoricida, Chrysochloridae). Tenrecs occupy a wider range of ecological niches than golden moles so we predict that they will be more morpho- logically diverse. Contrary to our expectations, we find that tenrec skulls are only more morphologically diverse than golden moles when measured in lateral view. Furthermore, similarities among the species-rich Microgale tenrec genus appear to mask higher morphological diversity in the rest of the family. These results reveal new insights into the morphological diversity of tenrecs and highlight the impor- tance of using quantitative methods to test qualitative assumptions about patterns of morphological diversity. Submitted 29 January 2015 Subjects Evolutionary Studies, Zoology Accepted 13 April 2015 Keywords Golden moles, Geometric morphometrics, Disparity, Morphology Published 30 April 2015 Corresponding author Natalie Cooper, [email protected] INTRODUCTION Academic editor Analysing patterns of morphological diversity (the variation in physical form Foote, Laura Wilson 1997) has important implications for our understanding of ecological and evolutionary Additional Information and traits. -
Investigating Evolutionary Processes Using Ancient and Historical DNA of Rodent Species
Investigating evolutionary processes using ancient and historical DNA of rodent species Thesis submitted for the degree of Doctor of Philosophy (PhD) University of London Royal Holloway University of London Egham, Surrey TW20 OEX Selina Brace November 2010 1 Declaration I, Selina Brace, declare that this thesis and the work presented in it is entirely my own. Where I have consulted the work of others, it is always clearly stated. Selina Brace Ian Barnes 2 “Why should we look to the past? ……Because there is nowhere else to look.” James Burke 3 Abstract The Late Quaternary has been a period of significant change for terrestrial mammals, including episodes of extinction, population sub-division and colonisation. Studying this period provides a means to improve understanding of evolutionary mechanisms, and to determine processes that have led to current distributions. For large mammals, recent work has demonstrated the utility of ancient DNA in understanding demographic change and phylogenetic relationships, largely through well-preserved specimens from permafrost and deep cave deposits. In contrast, much less ancient DNA work has been conducted on small mammals. This project focuses on the development of ancient mitochondrial DNA datasets to explore the utility of rodent ancient DNA analysis. Two studies in Europe investigate population change over millennial timescales. Arctic collared lemming (Dicrostonyx torquatus) specimens are chronologically sampled from a single cave locality, Trou Al’Wesse (Belgian Ardennes). Two end Pleistocene population extinction-recolonisation events are identified and correspond temporally with - localised disappearance of the woolly mammoth (Mammuthus primigenius). A second study examines postglacial histories of European water voles (Arvicola), revealing two temporally distinct colonisation events in the UK. -
Solenodon Genome Reveals Convergent Evolution of Venom in Eulipotyphlan Mammals
Solenodon genome reveals convergent evolution of venom in eulipotyphlan mammals Nicholas R. Casewella,1, Daniel Petrasb,c, Daren C. Cardd,e,f, Vivek Suranseg, Alexis M. Mychajliwh,i,j, David Richardsk,l, Ivan Koludarovm, Laura-Oana Albulescua, Julien Slagboomn, Benjamin-Florian Hempelb, Neville M. Ngumk, Rosalind J. Kennerleyo, Jorge L. Broccap, Gareth Whiteleya, Robert A. Harrisona, Fiona M. S. Boltona, Jordan Debonoq, Freek J. Vonkr, Jessica Alföldis, Jeremy Johnsons, Elinor K. Karlssons,t, Kerstin Lindblad-Tohs,u, Ian R. Mellork, Roderich D. Süssmuthb, Bryan G. Fryq, Sanjaya Kuruppuv,w, Wayne C. Hodgsonv, Jeroen Kooln, Todd A. Castoed, Ian Barnesx, Kartik Sunagarg, Eivind A. B. Undheimy,z,aa, and Samuel T. Turveybb aCentre for Snakebite Research & Interventions, Liverpool School of Tropical Medicine, Pembroke Place, L3 5QA Liverpool, United Kingdom; bInstitut für Chemie, Technische Universität Berlin, 10623 Berlin, Germany; cCollaborative Mass Spectrometry Innovation Center, University of California, San Diego, La Jolla, CA 92093; dDepartment of Biology, University of Texas at Arlington, Arlington, TX 76010; eDepartment of Organismic and Evolutionary Biology, Harvard University, Cambridge, MA 02138; fMuseum of Comparative Zoology, Harvard University, Cambridge, MA 02138; gEvolutionary Venomics Lab, Centre for Ecological Sciences, Indian Institute of Science, 560012 Bangalore, India; hDepartment of Biology, Stanford University, Stanford, CA 94305; iDepartment of Rancho La Brea, Natural History Museum of Los Angeles County, Los Angeles, -
The Last Survivors: Current Status and Conservation of the Non-Volant Land
1 The Last Survivors: current status and conservation of the non-volant land 2 mammals of the insular Caribbean 3 4 SAMUEL T. TURVEY,* ROSALIND J. KENNERLEY, JOSE M. NUÑEZ-MIÑO, AND RICHARD P. 5 YOUNG 6 7 Institute of Zoology, Zoological Society of London, Regent’s Park, London NW1 4RY (STT) 8 Durrell Wildlife Conservation Trust, Les Augrès Manor, Trinity, Jersey JE3 5BP, Channel 9 Islands (RJK, JNM, RPY) 10 11 *Correspondent: [email protected] 12 13 Running header: Status of Caribbean land mammals 14 1 15 The insular Caribbean is among the few oceanic-type island systems colonized by non-volant 16 land mammals. This region also has experienced the world’s highest levels of historical 17 mammal extinctions, with at least 29 species lost since AD 1500. Representatives of only 2 18 land-mammal families (Capromyidae and Solenodontidae) now survive, in Cuba, Hispaniola, 19 Jamaica, and the Bahama Archipelago. The conservation status of Caribbean land mammals 20 is surprisingly poorly understood. The most recent IUCN Red List assessment, from 2008, 21 recognized 15 endemic species, of which 13 were assessed as threatened. We reassessed all 22 available baseline data on the current status of the Caribbean land-mammal fauna within the 23 framework of the IUCN Red List, to determine specific conservation requirements for 24 Caribbean land-mammal species using an evidence-based approach. We recognize only 13 25 surviving species, 1 of which is not formally described and cannot be assessed using IUCN 26 criteria; 3 further species previously considered valid are interpreted as junior synonyms or 27 subspecies.