Low-Temperature Chemistry Between Water and Hydroxyl Radicals: H/D Isotopic Effects

Total Page:16

File Type:pdf, Size:1020Kb

Low-Temperature Chemistry Between Water and Hydroxyl Radicals: H/D Isotopic Effects Mon. Not. R. Astron. Soc. 000, 1{?? (2014) Printed 3 October 2018 (MN LaTEX style file v2.2) Low-temperature chemistry between water and hydroxyl radicals: H/D isotopic effects T. Lamberts1;2?, G. Fedoseev1, F. Puletti3, S. Ioppolo2, H. M. Cuppen2, and H. Linnartz1 1 Raymond and Beverly Sackler Laboratory for Astrophysics, Leiden Observatory, University of Leiden, P.O. Box 9513, NL 2300 RA Leiden, The Netherlands. 2 Theoretical Chemistry, Institute for Molecules and Materials, Radboud University Nijmegen, Heyendaalseweg 135, 6525 AJ Nijmegen, The Netherlands 3 Department of Chemistry, University College London, 20 Gordon Street, London WC1H 0AJ, UK Released 2014 Xxxxx XX ABSTRACT Sets of systematic laboratory experiments are presented - combining UHV cryo- genic and plasma-line deposition techniques - that allow to compare H/D isotopic effects in the reaction of H2O (D2O) ice with the hydroxyl radical OD (OH). The latter is known to play a key role as intermediate species in the solid state formation of water on icy grains in space. The main finding of our work is that the reaction H2O+OD −−! OH+HDO occurs and that this may affect the HDO/H2O abundances in space. The opposite reaction D2O + OH −−! OD + HDO is much less effective, and also given the lower D2O abundances in space not expected to be of astronomical relevance. The experimental results are extended to the other four possible reactions between hydroxyl and water isotopes and are subsequently used as input for Kinetic Monte Carlo simulations. This way we interpret our findings in an astronomical con- text, qualitatively testing the influence of the reaction rates. Key words: astrochemistry { methods: laboratory: molecular { methods: laboratory: solid state { solid state: volatile { ISM: molecules 1 INTRODUCTION tios as found in our oceans (Rodgers & Charnley 2002; Hartogh et al. 2011). Therefore, both the origin of the Surface reactions on grains have been proposed as an effec- HDO/H O ratio in the ices and their subsequent chem- tive way to form water at the low temperatures typical for 2 ical and thermal processing are currently widely studied the interstellar medium (van de Hulst 1949; Tielens & Hagen (Caselli & Ceccarelli 2012). It is in fact during the water for- arXiv:1511.02010v1 [astro-ph.SR] 6 Nov 2015 1982). Over the last ten years many of the possible reactions mation on dust surfaces when the deuterium fractionation have been tested in various laboratories and reaction routes, commences. The preferential incorporation of D over H in rates, and branching ratios have been determined (Hiraoka molecules can lead to D/H ratios in molecules that are much et al. 1998; Miyauchi et al. 2008; Ioppolo et al. 2008, 2010; larger than the primordial ratio of ∼ 1:5 × 10−5 (Piskunov Cuppen et al. 2010; Romanzin et al. 2011). The general con- et al. 1997; Oliveira et al. 2003). To understand the origin of clusions obtained in these studies are in line with each other this fractionation, it is neccessary to consider both the gas- (Dulieu 2011) and the astronomical relevance has been sum- phase and solid-state processes that are at play. The driving marized by van Dishoeck et al. (2013). forces behing these processes are the lower zero-point energy A detailed study of the solid state formation of wa- of an X-D bond with respect to an X-H bond and the dif- ter also holds the potential to characterize deuteration ef- ference in tunneling behavior, both as a result of the larger fects. With the goal to understand how water was deliv- mass of deuterium (Roberts et al. 2003; Tielens 1983; Caselli ered to Earth, there has been much interest in linking the & Ceccarelli 2012; Lipshtat et al. 2004). One of the possi- HDO/H O ratio in cometary, interstellar, and laboratory 2 ble enhancement routes for hydrocarbon bonds is the simple ices as well as astronomical (gas-phase) observations to ra- replacement of a hydrogen by a deuterium via a deuterium mediated abstraction mechanism: −CH + D −−!−C + HD ? corresponding author, current address: Computational Chem- followed by −C + D −−!−CD (Nagaoka et al. 2005, 2007). istry Group, Inst. of Theoretical Chemistry, University of An example is substitution of H for D in solid methanol, Stuttgart, Pfaffenwaldring 55, D-70569, Stuttgart, Germany which has been found to be efficient, whereas the reverse c 2014 RAS 2 T. Lamberts et al. reaction (substituting D for H) is not. Note that Nagaoka Table 1. Summary of the performed experiments with additional et al. (2005) have also attempted to substitute hydrogen in calibration and control experiments and corresponding parame- water by the same process, but did not find any deuteration ters, Tsurf = 15 K and texp = 90 min in all cases. The deposition upon D exposure. The non-occurence of reaction H2O + D rate of the species is denoted as fdep and the angle represents the has been confirmed in our laboratory (unpublished data). angle of the deposition line with respect to the surface. Another abstraction process, so far studied in less de- ◦ ◦ tail, involves OH and OD radicals. Hydroxyl radicals play an 90 fdep 45 Discharge fdep important role as reactive intermediates in water formation (cm2 s−1) (cm2 s−1) (see e.g. Cuppen et al. 2010). Furthermore, recent micro- 18 12 13 a 1a H2 O 4 × 10 D2O 6 1 × 10 scopic models have shown that the radical concentration in 18 12 13 1b H2 O 4 × 10 D2O { 1 × 10 the ice can be very high if photon penetration is included 13 a 1c { { D2O 6 1 × 10 (Chang & Herbst 2014). Garrod (2013) indicated the im- 1d H18O 4 × 1012 {{{ portance of abstraction reactions by the hydroxyl radical 2 12 18 13 a in the framework of complex hydrocarbon molecules. Such 2a D2O 4 × 10 H2 O 6 1 × 10 12 18 13 an OH induced abstraction mechanism is particularly im- 2b D2O 4 × 10 H2 O { 1 × 10 18 13 a portant in water-rich ices, because both OH and OD radi- 2c { { H2 O 6 1 × 10 2d D O 4 × 1012 {{{ cals are produced on the surface by radical chemistry and 2 by photodissociation of water isotopologues (Ioppolo et al. aThe upper limit is derived from the D O and H18O deposition ¨ 2 2 2008; Andersson & van Dishoeck 2008; Oberg et al. 2009). rate when the microwave source is turned off. Considering again the formation of HDO in the ice, the water surface reaction network needs to be duplicated, in- (Lamberts et al. 2015). Therefore, here, only reactions R1 volving both reactions with hydrogen and deuterium. As a and R4 are tested experimentally, at low temperature and result of the large number of reactions that are in compe- using reflection absorption infrared spectroscopy (RAIRS) tition with each other and with diffusion, it is experimen- as an in-situ diagnostic tool. tally challenging to study hydrogenation and deuteration, Note that from an astrochemical point-of-view, reac- simultaneously. Therefore, in the past, either the deutera- tions R2, R4, and R6 are unlikely to be relevant as a result tion pathways have been studied separately, e.g.,O + D 2 of the low concentrations of the reactants (D2O and OD) (Chaabouni et al. 2012), or specific reaction routes are present in the ice. Nevertheless, we put efforts in character- tackled theoretically and experimentally, e.g., OH (OD) + izing R4, as an understanding of the underlying mechanism H2 (HD or D2) and H2O2 (D2O2) + H (D) (Kristensen et al. helps in painting the full picture. Reactions R1 and R3, on 2011; Oba et al. 2012, 2014). Here, we add to these studies the contrary, could occur in regions with a high photon flux and investigate the cross links between the hydrogenation as this causes water and isotopologues to dissociate, thus and deuteration networks by the following four hydrogen generating additional hydroxyl radicals. abstraction reaction via hydroxyl radicals: In the following, we outline the experimental setup and k sets of experiments performed (Section 2), the analysis of H O + OD −!1 OH + HDO (R1) 2 the resulting RAIR spectra (Section 3), the astrochemical k2 HDO + OD −! OH + D2O (R2) implications by means of a Kinetic Monte Carlo model (Sec- tion 4), and we conclude with summarizing remarks (Sec- k3 HDO + OH −! OD + H2O (R3) tion 5). k4 D2O + OH −! OD + HDO : (R4) Hydrogen abstraction of OH from H O (or the fully 2 2 EXPERIMENTAL METHODS deuterated analog) can also take place Two sets of representative experiments and their corre- k5 H2O + OH −! OH + H2O (R5) sponding control experiments are summarized in Table 1. k6 All measurements are performed at a surface temperature D O + OD −! OD + D O (R6) 2 2 of 15 K for a duration of 90 minutes. The two experiments and although this does not have a net effect on the abun- that are used for this study are part of a larger set, varying dances in the ice, it can be seen as an analog of bulk dif- mixing ratios and temperatures, and found to be optimum fusion, of which models indicate it is of great importance for the goals set in this work. The findings of the other ex- in ice chemistry (Vasyunin & Herbst 2013; Lamberts et al. periments are largely in line with the ones discussed here, 2014; Chang & Herbst 2014). The isolated OH-H2O com- but do not provide additional information. 2 plex has been detected in a variety of matrices (Ar, Ne, O2) Experiments are performed using the SURFRESIDE as has been summarized by Do (2014). This shows that a setup, which was constructed to systematically investigate pre-reactive complex indeed can be formed.
Recommended publications
  • Carbon Kinetic Isotope Effect in the Oxidation of Methane by The
    JOURNAL OF GEOPHYSICAL RESEARCH, VOL. 95, NO. D13, PAGES 22,455-22,462, DECEMBER 20, 1990 CarbonKinetic IsotopeEffect in the Oxidationof Methaneby the Hydroxyl Radical CttRISTOPHERA. CANTRELL,RICHARD E. SHE•, ANTHONY H. MCDANmL, JACK G. CALVERT, JAMESA. DAVIDSON,DAVID C. LOWEl, STANLEYC. TYLER,RALPH J. CICERONE2, AND JAMES P. GREENBERG AtmosphericKinetics and PhotochemistryGroup, AtmosphericChemistry Division, National Centerfor AtmosphericResearch, Boulder, Colorado The reactionof the hydroxylradical (HO) with the stablecafix)n isotopes of methanehas been studied as a functionof temperaturefrom 273 to 353 K. The measuredratio of the rate coefficientsfor reaction with•ZCHn relative to •3CH•(kn•/kn3) was 1.0054 (20.0009 at the95% confidence interval), independent of temperaturewithin the precisionof the measurement,over the rangestudied. The precisionof the present valueis muchimproved over that of previousstudies, and this resultprovides important constraints on the currentunderstanding of the cyclingof methanethrough the atmospherethrough the useof carbonisotope measurements. INTRODUCTION weightedaverage of the sourceratios must equal the atmospher- Methane (CH•) is an importanttrace gas in the atmosphere ic ratio, after correctionfor fractionationin any lossprocesses. [Wofsy,1976]. It is a key sink for the tropospherichydroxyl The primaryloss of CI-I4in the troposphereis the reactionwith radical. Methane contributesto greenhousewarming [Donner the hydroxylradical: and Ramanathan,1980]; its potentialwarming effects follow only CO2 and H20. Methaneis a primary sink for chlorine (R1) CHn + HO ---)CH3 + HzO atomsin the stratosphereand a majorsource of watervapor in the upper stratosphere. The concentrationof CI-I4 in the The rate coefficient for this reaction has been studied extensive- tropospherehas been increasing at a rateof approximately1% ly (seereview by Ravishankara[1988]), but dataindicating the per year, at leastover the pastdecade [Rasmussen and Khalil, effect of isotopesubstitution in methaneare scarce.
    [Show full text]
  • The Distribution of the Hydroxyl Radical in the Troposphere Jack
    The Distribution of the Hydroxyl Radical in the Troposphere By Jack Fishman Paul J. Crutzen Department of Atmospheric Science Colorado State University Fort Collins, Colorado THE DISTRIBUTION OF THE HYDROXYL RADICAL IN THE TROPOSPHERE by Jack Fishman and Paul J. Crutzen Preparation of this report has been financially supported by Environmental Protection Agency Grant No. R80492l-0l Department of Atmospheric Science Colorado State University Fort Collins, Colorado January, 1978 Atmospheric Science Paper No. 284 Abstract A quasi-steady state photochemical numerical model is developed to calculate a two-dimensional distribution of the hydroxyl (OH) radical in the troposphere. The diurnally, seasonally averaged globaJ 5 3 value of OH derived by this model is 3 x 10 cm- which is several times lower than the number computed previously by other models, but is in good agreement with the value inferred from the analysis of the tropospheric distribution of methyl chloroform. Likewise, the effects of the computed OH distribution on the tropospheric budgets of ozone and carbon monoxide are not inconsistent with this lower computed value. One important result of this research is the detailed analysis of the distribution of tropospheric ozone in the Southern Hemisphere. Our work shows that there is a considerable difference in the tropospheric ozone patterns of the two hemispheres and that through the analysis of the likely photochemistry occurring in the troposphere, a significant source of tropospheric ozone may exist in the Northern Hemisphere due to carbon monoxide oxidation. Future research efforts will be devoted to the meteorological dynamics of the two hemispheres to try to distinguish if these physical processes are similarly able to explain the interhemispheric differences in tropospheric ozone.
    [Show full text]
  • Reactivity of the Solvated Electron, the Hydroxyl Radical and Its Precursor in Deuterated Water Studied by Picosecond Pulse Radiolysis Furong Wang
    Reactivity of the Solvated Electron, the Hydroxyl Radical and its Precursor in Deuterated Water Studied by Picosecond Pulse Radiolysis Furong Wang To cite this version: Furong Wang. Reactivity of the Solvated Electron, the Hydroxyl Radical and its Precursor in Deuter- ated Water Studied by Picosecond Pulse Radiolysis. Theoretical and/or physical chemistry. Université Paris Saclay (COmUE), 2018. English. NNT : 2018SACLS399. tel-02057515 HAL Id: tel-02057515 https://tel.archives-ouvertes.fr/tel-02057515 Submitted on 5 Mar 2019 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. Reactivity of the Solvated Electron, the Hydroxyl Radical and its Precursor in Deuterated Water 2018SACLS399 : Studied by Picosecond Pulse NNT Radiolysis Thèse de doctorat de l'Université Paris-Saclay préparée à l'Université Paris-Sud École doctorale n°571 : sciences chimiques : molécules, matériaux instrumentation et biosystèmes (2MIB) Spécialité de doctorat : Chimie Thèse présentée et soutenue, le 22 Octobre, 2018, par Mme Furong WANG Composition du Jury : Mme Isabelle Lampre Professeur, Université Paris-Sud (– LCP) Présidente M. Jean-Marc Jung Professeur, Université de Strasbourg (– IPHC) Rapporteur M. Philippe Moisy Directeur de recherche, CEA Marcoule Rapporteur Mme Sophie Le Caer Directrice de recherche, CEA (– LIONS) Examinateur M.
    [Show full text]
  • Chemical Basis of Reactive Oxygen Species Reactivity and Involvement in Neurodegenerative Diseases
    International Journal of Molecular Sciences Review Chemical Basis of Reactive Oxygen Species Reactivity and Involvement in Neurodegenerative Diseases Fabrice Collin Laboratoire des IMRCP, Université de Toulouse, CNRS UMR 5623, Université Toulouse III-Paul Sabatier, 118 Route de Narbonne, 31062 Toulouse CEDEX 09, France; [email protected] Received: 26 April 2019; Accepted: 13 May 2019; Published: 15 May 2019 Abstract: Increasing numbers of individuals suffer from neurodegenerative diseases, which are characterized by progressive loss of neurons. Oxidative stress, in particular, the overproduction of Reactive Oxygen Species (ROS), play an important role in the development of these diseases, as evidenced by the detection of products of lipid, protein and DNA oxidation in vivo. Even if they participate in cell signaling and metabolism regulation, ROS are also formidable weapons against most of the biological materials because of their intrinsic nature. By nature too, neurons are particularly sensitive to oxidation because of their high polyunsaturated fatty acid content, weak antioxidant defense and high oxygen consumption. Thus, the overproduction of ROS in neurons appears as particularly deleterious and the mechanisms involved in oxidative degradation of biomolecules are numerous and complexes. This review highlights the production and regulation of ROS, their chemical properties, both from kinetic and thermodynamic points of view, the links between them, and their implication in neurodegenerative diseases. Keywords: reactive oxygen species; superoxide anion; hydroxyl radical; hydrogen peroxide; hydroperoxides; neurodegenerative diseases; NADPH oxidase; superoxide dismutase 1. Introduction Reactive Oxygen Species (ROS) are radical or molecular species whose physical-chemical properties are well-known both on thermodynamic and kinetic points of view.
    [Show full text]
  • Migration Reactions
    CHAPTER 3 Radical Reactions: Part 1 A. J. CLARK, J. V. GEDEN, and N. P. MURPHY Department of Chemistry, University of Warwick Introduction Rearrangements Group Migration β-Scission (Ring Opening) Ring Expansion Intramolecular Addition Cyclization Tandem Reactions Radical Annulation Fragmentation, Recombination, and Homolysis Atom Abstraction Reactions Hydrogen abstraction by Carbon-centred Radicals Hydrogen Abstraction by Heteroatom-centred Radicals Halogen Abstraction Halogenation Addition Reactions Addition to Carbon-Carbon Multiple Bonds Addition to Oxygen-containing Multiple Bonds Addition to Nitrogen-containing Multiple Bonds 1 Homolytic Substitution Aromatic Substitution SH2 and Related Reactions Reactivity Effects Polarity and Philicity Stability of Radicals Stereoselectivity in Radical Reactions Stereoselectivity in Cyclization Stereoselectivity in Addition Reactions Stereoselectivity in Atom Transfer Redox Reactions Radical Ions Anion Radicals Cation Radicals Peroxides, Peroxyl, and Hydroxyl Radicals Peroxides Peroxyl Radicals Hydroxyl Radical References 2 Introduction Free radical chemistry continues to be a focus for research with a number of reviews being published in 2000. Green aspects of chemistry have attracted a lot of attention with most work conducted investigating atmospheric chemistry, however on a review the use of supercritical fluids in radical reactions dealing solvent effects on chemical reactivity has appeared.1A The kinetics and thermochemistry of a range of free radical reactions has been reviewed. The review includes descriptions of the kinetics of a variety of unimolecular decomposition and isomerisation reactions as well as bimolecular hydrogen atom abstraction, additions, combinations and disproportionations. 204. In synthetic applications a review on the hydroxylation of benzene to phenol using Fenton’s reagent has appeared 254 as well as reviews on the synthesis of heterocycles using SRN1 mechansims279, and radical reactions controlled by Lewis Acids, 265.
    [Show full text]
  • Hydroxyl Radical Generation by the H2O2/Cuii/Phenanthroline System
    applied sciences Article II Hydroxyl Radical Generation by the H2O2/Cu /Phenanthroline System under Both Neutral and Alkaline Conditions: An EPR/Spin-Trapping Investigation Elsa Walger 1,* , Nathalie Marlin 1 ,Gérard Mortha 1, Florian Molton 2 and Carole Duboc 2 1 Institute of Engineering, University Grenoble Alpes, CNRS, Grenoble INP, LGP2, F-38000 Grenoble, France; [email protected] (N.M.); [email protected] (G.M.) 2 Department of Molecular Chemistry, University Grenoble Alpes, CNRS, DCM, F-38000 Grenoble, France; fl[email protected] (F.M.); [email protected] (C.D.) * Correspondence: [email protected] I Abstract: The copper–phenanthroline complex Cu (Phen)2 was the first artificial nuclease studied II in biology. The mechanism responsible for this activity involves Cu (Phen)2 and H2O2. Even if H2O2/Cu systems have been extensively studied in biology and oxidative chemistry, most of these studies were carried out at physiological pH only, and little information is available on the generation II of radicals by the H2O2/Cu -Phen system. In the context of paper pulp bleaching to improve the bleaching ability of H2O2, this system has been investigated, mostly at alkaline pH, and more recently at near-neutral pH in the case of dyed cellulosic fibers. Hence, this paper aims at studying the II production of radicals with the H2O2/Cu -Phen system at near-neutral and alkaline pHs. Using the EPR/spin-trapping method, HO• formation was monitored to understand the mechanisms involved. DMPO was used as a spin-trap to form DMPO–OH in the presence of HO•, and two HO• scavengers were compared to identify the origin of the observed DMPO–OH adduct, as nucleophilic addition of water onto DMPO leads to the same adduct.
    [Show full text]
  • Modulation of Hydroxyl Radical Reactivity and Radical Degradation of High Density Polyethylene
    Modulation of Hydroxyl Radical Reactivity and Radical Degradation of High Density Polyethylene Susan M. Mitroka Dissertation submitted to the faculty of the Virginia Polytechnic Institute and State University in partial fulfillment of the requirements for the degree of Doctor of Philosophy In Chemistry Dr. James M. Tanko, Chairman Dr. Paul Carlier Dr. Andrea Dietrich Dr. Timothy E. Long Dr. Diego Troya June 25, 2010 Blacksburg, Virginia Keywords : hydroxyl radical, hydrogen atom transfer, polarized transition state, oxidation, auto oxidation, high density polyethylene, accelerated aging Copyright 2010, S. Mitroka Modulation of Hydroxyl Radical Reactivity and Radical Degradation of High Density Polyethylene Susan M. Mitroka ABSTRACT Oxidative processes are linked to a number of major disease states as well as the breakdown of many materials. Of particular importance are reactive oxygen species (ROS), as they are known to be endogenously produced in biological systems as well as exogenously produced through a variety of different means. In hopes of better understanding what controls the behavior of ROS, researchers have studied radical chemistry on a fundamental level. Fundamental knowledge of what contributes to oxidative processes can be extrapolated to more complex biological or macromolecular systems. Fundamental concepts and applied data (i.e. interaction of ROS with polymers, biomolecules, etc.) are critical to understanding the reactivity of ROS. A detailed review of the literature, focusing primarily on the hydroxyl radical (HO•) and hydrogen atom (H•) abstraction reactions, is presented in Chapter 1. Also reviewed herein is the literature concerning high density polyethylene (HDPE) degradation. Exposure to treated water systems is known to greatly reduce the lifetime of HDPE pipe.
    [Show full text]
  • Engineering a Solution to Remediate FOG, Prevent Concrete Corrosion and Treat Odors in Pump Stations and Wastewater Plants Using Hydroxyl Radical Technology
    Engineering a Solution to Remediate FOG, Prevent Concrete Corrosion and Treat Odors in Pump Stations and Wastewater Plants Using Hydroxyl Radical Technology Suzanne Dill What We’re Going to Talk About A trifecta of applications! ✓ODOR CONTROL ✓FOG MITIGATION ✓CORROSION Wastewater Odor It smells, it corrodes and it’s downright deadly! • Hydrogen sulfide • Characteristic rotten egg smell • Corrodes infrastructure • Toxic to humans • Generated in wastewater by • Bacteria converting sulfates to sulfide ions • Sulfide ions join with hydrogen 4 Fats, Oils & Grease What’s that floating on top of the wastewater? • Fats are normally solid at room temperature • Oils are normally liquid at room temperature • Grease, a general term used to describe a soft or melted animal fat or a lubricant 5 Fats, Oils & Grease What are they? • Fats, oils & grease come in two forms: • Polar • Non-polar • Polar are associated with animal Triglyceride Molecule fat • Non-polar are associated with petrochemical hydrocarbons 6 Fats, Oils & Grease What happens? • Poor solubility • Separates from the liquid • Lower specific gravity than water • Congeals on the surface • Solid mass • Physically removed 7 Fats, Oils & Grease How does it affect us? • Sewer backups and overflows • Health hazards • Legal and criminal liabilities • Increased energy and maintenance costs • Decreased plant operating efficiency • Odors and infrastructure corrosion • Decreased infrastructure life • Estimated $25 billion annual costs Corrosion How does it happen, what does it do? • Microbial induced
    [Show full text]
  • Nitric Oxide 93 (2019) 15–24
    Nitric Oxide 93 (2019) 15–24 Contents lists available at ScienceDirect Nitric Oxide journal homepage: www.elsevier.com/locate/yniox Comprehensive study of nitrofuroxanoquinolines. New perspective donors of NO molecules T ∗ Nikita S. Fedik, Mikhail E. Kletskii, Oleg N. Burov , Anton V. Lisovin, Sergey V. Kurbatov, Vladimir A. Chistyakov, Pavel G. Morozov Department of Chemistry, Southern Federal University, 7, Zorge St., Rostov-on-Don, 344090, Russia ABSTRACT The goal of present work is the study of NO releasing mechanisms in nitrofuroxanoquinoline (NFQ) derivatives. Mechanisms of their structural non-rigidity and pathways of NO donation - spontaneous or under the action of sulfanyl radicals or photoirradiation - were considered in details, both experimentally and quantum chemically. Furoxan-containing systems of the discussed type are not capable of spontaneous or photoinduced decomposition under mild conditions, and sulfanyl (radical) induced processes are the most preferable. It was shown that appropriate modification of NFQ through [3 + 2] cycloaddition and subsequent aromatization is a powerful tool to design new prospective donors of NO molecule. Two newly obtained NFQ derivatives were proven to have unusually high NO activity in full accordance with the theoretical model. We hope that these examples will encourage community to seek for new NO active molecules among cycloadducts and modified furoxanes. 1. Introduction in equilibrium mixture of N1- and N3-oxide tautomers (Scheme 1 [9,18]). Nitrogen (II) oxide is a multimodal regulator of various physiolo- The interrelationship of tautomers in this mixture is still unexplored gical processes (relaxation of vessels, thrombocyte aggregation inhibi- but deserves careful attention, at least, for following reasons: tion, immune and nervous system operation), and also pathological conditions in a human organism (inflectional, inflammatory, and tu- • Intermediate dinitroso form C can act as an independent source of morous diseases) [1–3].
    [Show full text]
  • Product Study of the OH Radical Initiated Oxidation of Dimethyl Sulfide
    Kinetic and Product Studies of the Hydroxyl Radical Initiated Oxidation of Dimethyl Sulfide in the Temperature Range 250 - 300 K Thesis submitted to the Faculty of Mathematics and Natural Sciences Bergische Universität Wuppertal for the Degree of Doctor of Natural Sciences (Dr. rer. nat.) by Mihaela Albu born in Iasi, Romania February, 2008 Diese Dissertation kann wie folgt zitiert werden: urn:nbn:de:hbz:468-20080709 [http://nbn-resolving.de/urn/resolver.pl?urn=urn%3Anbn%3Ade%3Ahbz%3A468-20080709] The work described in this thesis was carried out in the Department of Physical Chemistry, Bergische Universität Wuppertal, under the supervision of Prof. Dr. Karl Heinz Becker. Referee: Prof. Dr. Karl Heinz Becker Co-referee: Prof. Dr. Thorsten Benter Acknowledgements I would like to express my sincere thanks to Prof. Dr. Karl Heinz Becker for the opportunity of doing this Ph.D. in his research group and for the supervision of this work. Thanks also for his support and encouragement. I am very grateful to Prof. Dr. Thorsten Benter for agreeing to co-referee the thesis and his many useful comments. Very special thanks for his support and encouragement and also for the fruitful discussions and his appreciation of my work during the “Wednesday” seminars. I would like to express my appreciation to Prof. Dr. Siegmar Gäb and Prof. Dr. Joachim M. Marzinkowski for their kindness to be co-examiners. My sincere and distinguished thanks are also due to Dr. Ian Barnes who not only helped me to understand at least a part of the vast and fascinating domain of the atmospheric chemistry but also followed with his special care my scientific work.
    [Show full text]
  • Hydrogen Sulfide and Persulfides Oxidation by Biologically Relevant
    antioxidants Review Hydrogen Sulfide and Persulfides Oxidation by Biologically Relevant Oxidizing Species Dayana Benchoam 1,2, Ernesto Cuevasanta 1,2,3, Matías N. Möller 2,4 and Beatriz Alvarez 1,2,* 1 Laboratorio de Enzimología, Instituto de Química Biológica, Facultad de Ciencias, Universidad de la República, Montevideo 11400, Uruguay; [email protected] (D.B.); [email protected] (E.C.) 2 Center for Free Radical and Biomedical Research, Universidad de la República, Montevideo 11800, Uruguay; [email protected] 3 Unidad de Bioquímica Analítica, Centro de Investigaciones Nucleares, Facultad de Ciencias, Universidad de la República, Montevideo 11400, Uruguay 4 Laboratorio de Fisicoquímica Biológica, Instituto de Química Biológica, Facultad de Ciencias, Universidad de la República, Montevideo 11400, Uruguay * Correspondence: [email protected] Received: 22 January 2019; Accepted: 19 February 2019; Published: 22 February 2019 – Abstract: Hydrogen sulfide (H2S/HS ) can be formed in mammalian tissues and exert physiological effects. It can react with metal centers and oxidized thiol products such as disulfides (RSSR) and sulfenic acids (RSOH). Reactions with oxidized thiol products form persulfides (RSSH/RSS–). Persulfides have been proposed to transduce the signaling effects of H2S through the modification of critical cysteines. They are more nucleophilic and acidic than thiols and, contrary to thiols, also possess electrophilic character. In this review, we summarize the biochemistry of hydrogen sulfide and persulfides, focusing on redox aspects. We describe biologically relevant one- and two-electron oxidants and their reactions with H2S and persulfides, as well as the fates of the oxidation products. The biological implications are discussed. Keywords: hydrogen sulfide; persulfide; hydropersulfide; reactive oxygen species; sulfiyl radical 1.
    [Show full text]
  • Radical Intermediates in the Addition of OH to Propene: Photolytic Precursors and Angular Momentum Effects M
    Article pubs.acs.org/JPCA Radical Intermediates in the Addition of OH to Propene: Photolytic Precursors and Angular Momentum Effects M. D. Brynteson,† C. C. Womack,† R. S. Booth,† S. -H. Lee,‡ J. J. Lin,§ and L. J. Butler†,* †Department of Chemistry and the James Franck Institute, The University of Chicago, Chicago, Illinois 60637, United States ‡National Synchrotron Radiation Research Center, Hsinchu 30076, Taiwan, Republic of China §Institute of Atomic and Molecular Sciences, Academia Sinica, Taipei 10617, Taiwan, Republic of China *S Supporting Information ABSTRACT: We investigate the photolytic production of two radical intermediates in the reaction of OH with propene, one from addition of the hydroxyl radical to the terminal carbon and the other from addition to the center carbon. In a collision-free environment, we photodissociate a mixture of 1-bromo-2-propanol and 2-bromo-1- propanol at 193 nm to produce these radical intermediates. The data show two primary photolytic processes occur: C−Br photofission and HBr photoelimination. Using a velocity map imaging apparatus, we measured the speed distribution of the recoiling bromine atoms, yielding the distribution of kinetic energies of the nascent C3H6OH 2 2 radicals + Br. Resolving the velocity distributions of Br( P1/2) and Br( P3/2) separately with 2 + 1 REMPI allows us to determine the total (vibrational + rotational) internal energy distribution in the nascent radicals. Using an impulsive model to estimate the rotational energy imparted to the nascent C3H6OH radicals, we predict the percentage of radicals having vibrational energy above and below the lowest dissociation barrier, that to OH + propene; it accurately predicts the measured velocity distribution of the stable C3H6OH radicals.
    [Show full text]