برانمج توثيق املراجع العلمية Citation & bibliographic Management Dr. Atef Mohamed Khedr Nassar Associate Professor, Faculty of Agriculture
برنامج تنمية قدرات اعضاء هيئة التدريس Faculty and Leadership Development Center (FLDC) 2 البشاشة المشاركة االختالف ال اإلحترام يفسد للود واالبتسام الفعالة قضية المتبادل اجللسة ا ألوىل: 9:00 12:00-
اسرتاحه: 12:00 – 12:30
اجللسة الثانية: 12:30 – 2:00
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يهدف هذا البرنامج إلى إكساب المشاركين المعارف والمهارات األساسية واالتجاهات اإليجابية المتعلقة باستخدام برامج إعداد وتوثيق المراجع وذلك إلعداد بحث علمي يتسم بالمعايير الدولية ويمكن نشره دوليا نشاط )5 ق(
الفرق بين ال Citation و Bibliography What is citation?
A "citation" is the way you tell your readers that certain material in your work came from another source. More importantly, it gives the readers the information necessary to find that source again,
The citation include: information about the author the title of the work the name and location of the publishing company the date of publication the page numbers Why should I cite sources?
Established academic practice Shows where you got your information – well-founded research Allows other researchers to trace your sources of information quickly and easily Acknowledges the work of other researchers Protects you against accusations of plagiarism Does citing sources make my work less original?
No!
On the contrary, citing sources actually helps your reader distinguish your ideas from those of your sources. This will actually emphasize the originality of your own work. When do I need to cite?
whenever you use quotes whenever you paraphrase whenever you use an idea that someone else has already expressed whenever you make specific reference to the work of another whenever someone else's work has been critical in developing your own ideas Which style should I use?
Various different styles are in use If you are writing a paper for an academic journal, use the style that they specify If no advice, choose one of the University’s recommended schemes: Harvard, Numeric (Like Vancouver) Vancouver probably is the most suitable one for Health & Medical subjects Citation styles Humanities Chicago MLA (Modern Language Association) Sciences ACS (American Chemical Society) AMA Citation Style IEEE (Institute of Electrical and Electronics Engineers) NLM (National Library of Medicine) Vancouver (Biological Sciences) Social Sciences AAA (American Anthropological Association) APA (American Psychological Association) APSA (American Political Science Association) Reference management software
Download and store references Include abstracts, keywords and notes with the references & also full texts. Produce lists of references for yourself or others Automatically insert citations of references while typing (Cite While You Write) Create a bibliography while typing (Cite While You Write) Reference Management Tools
™ Free Reference Management Tools Citation Style Languages There are over 8000free CSL citation styles •ACS ChemWorx •Katalog.plus! •Bibliograph •Lens Writer Logos •BibSonomy • •Manuscripts •CitacePRO •Mendeley •Cite This For Me •Open Science Framework •colwiz •pandoc Paperpile •CrossRef • •Papers •digi-libris Reader •Qiqqa •Docear •ReadCube •Drupal •Refeus ReFindit •EasyBib • •RefME •F1000Workspace •Talis Aspire •Fidus Writer •WordPress: •I, Librarian • Academic Blogger’s Toolkit BibSonomy/PUMA CSL •Islandora • • KCite •Jekyll • MendeleyPlugin •Juris-M • Zotpress •Zotero
This is the Sign In page for an EndNoteWeb account. We will go through the steps to register. You first click on the Sign Up for an account - to complete this process. You will be directed to this screen where you are required to enter your First and Last Names plus a Password and answer questions about your Primary Role/Title and Subject Area. You also must 'agree' to the license agreement. Note the complicated Password Guidelines and please make sure you save the password in a secure place. From the initial EndNoteWeb page, you are given the options to My References, Collect, Organize and Format bibliographic citations. We will review all these sections. From the Collect section, there are three options to obtain citations. The Online Search option retrieves references from a selected database or library catalog.
The New Reference enables users to create new references by entering manually the relevant data in the bibliographic fields of the displayed template.
The Import References is used to collect references saved as text files (.txt) from databases or any other sources. We will access PubMed. In the PubMed Search box, enter the avian flu AND chickens keyword search. After the search is displayed, check the left-column boxes. (see Module 4.1 for further instructions). These checked citations will be exported to EndNoteWeb. In the Summary display, 12 citations that previously were checked are listed. We will click on the Citation manager send to file option in order to save and export these files to EndNoteWeb . Note that the Medline display lists the fields that will be transferred to EndNoteWeb Via the Reference Sources drop down menu, access and Login to EndNoteWeb. In the Collect section, we will open the Import References option. From the File drop down menu, browse for the previously saved .txt file, activate PubMed(NLM) from the filter menu and, in the To: Select menu, choose the new group option. In the Enter a New Group Name option, add the Avian Flu and Chickens name and click on OK. The final step is to click on the Import box and transfer the files from the .txt file. This slide confirms that 12 references have been imported into the Avian Flu and Chickens group that previously was created. From the My References option, display the Avian Flu and Chickens group. Note that all the groups are displayed. For all of these citations, you can view the Author, Year, Title and Journal information. Also, you can Copy, Delete or Remove from Group any of the citations. In Collect, you also can import records from an EndNote File that you have saved. You are able to select the EndNote Filter and also select a group (e.g. Avian Flu and Chickens) that the files will be imported To. We now will proceed to the Organize section. In the Collect section, you also can manually enter New References in the Bibliographic Fields. The key is to make sure you have entered all the relevant data so that that they can be formatted correctly. In the Organize/Manage My Groups section, you will note that the Avian Flu and Chickens Group has 12 references and a previously saved Bednets Group has 17 references. Also you can create New Group(s) if you choose and look at other Group(s) that have been created. In the Format section, we have activated the Bibliographic style drop down menu. From this page, you can choose a specific journal or format (e.g. BMC Medicine). In the Commonly Used Styles list, the Harvard Writing Style Guide is recommended for Science related bibliographic citations. For this bibliography, we will organize the Avian Flu and Chickens References using the Harvard Bibliographic style with the TXT File Format. You also have Save, Email and Preview & Print options. We have displayed the Print option. Note that in the Harvard writing style, the citations are in alphabetical order by author and also include the year published, title, abbreviated journal title, volume and pages. We have displayed the E-Mail option. You can send an email of this bibliography to a colleague or to yourself (if you do not have a flash or floppy drive available). We have displayed the Save option. As noted with importing of files, you can save this text document to the computer's hard (C:) drive, a CD-ROM, flash drive or floppy disk. We have saved the file to the C: drive in the Documents folder as a .txt file. This file can be opened with any word processing software. Note the display of the bibliographic citation that is using the Harvard Style. The Format Paper option lets you save references to a document or file as a rich text file (.rtf) - for temporary citations. A new version of your paper is saved with formatted citations and a bibliography. In this example we will select the Harvard Bibliographic style. In the Options section, you can choose to change your Password, E-mail Address and Profile Information. We have displayed the Change Password option. We now have accessed the All My References display. In the left column, the, 5 records from Web of Knowledge have been saved to EndNote Web in the Unfiled group. Also note the original 12 citations from the Avian Flu and Chickens group plus a previous one titled Bednets. We have displayed the Unfiled citations. By checking the boxes and highlighting the appropriate group from the drop down menu, you can add these references to the Avian Flu and Chickens group. Note that Web of Knowledge is listed as the Source Record for these citations. We now have transferred 5 previously Unfiled citations to the Avian Flu and Chickens group and have a total of 17 references. Periodically, you will want to delete references from your EndNoteWeb account. We have returned to the My References display, have clicked on all the entries in the Bednets group and on the Delete icon. In the My References column, you will note no citations in the Bednets and 30 in the Unfiled group. You will need to click on the citations once more and delete them to the Trash group. In this PubMed Online Search list, we are combining the terms bednets And clinical trials by using the Any Field option. Note, in the drop down menu, the various choices to make a search more precise that uses many of the PubMed LIMITS options. From PubMed, we have 61 articles for the bednets AND clinical trials search. We will Retrieve these citations. In the Online Search Results page, you can view citations that are similar to the HINARI/PubMed Summary display. You can show 10, 25 or 50 citations on a page. To save citations to a group, you must place a check mark in the box next to the author's name. In this example, we have checked 5 boxes. We will click on the add to group drop down menu that allows you to create a new group and lists previous groups. Note the Go to URL link. This will transfer you to the PubMed Citation for this listing - see next slide. This is an example of the Abstract display of PubMed. It will include icons for a further link to a Free Full Text article and a HINARI one. If you choose to access the other articles, you must check if it is a HINARI title by viewing the Journals collection A-Z list. Note that PubMed’s Send to: drop down menu includes a Citation manager option. We now have displayed the add to group option and will create the Bednets group by entering the name and clicking on OK.
“Drives Researcher “Enables Collaboration Productivity” and Knowledge Sharing” Research Network Reference manager & Groups
“Creates Additional Insights & Build Apps” Research Data & API Library structure
Step 1: Sign up for Mendeley online
Step 2: Download Mendeley Desktop
https://www.mendeley.com/download-mendeley-desktop/windows/instructions/
Step 3: Build Your Library Mendeley desktop overview Library structure Your references Document details Drag and drop Adding documents Import your references from BibTex, Endnote, RIS or Zotero Select a file or folder to add from your computer
Watch a folder
Add references manually
You can also: • Use the Web Importer to add from online databases • Find new articles in the Mendeley Web Catalog Importing documents Adding new research
Mendeley Web Importer Mendeley Research Catalog Document Details Lookup
Enter the DOI, PubMed, or ArXiv ID and click on the magnifying glass to start lookup
Mendeley adds missing info automatically Web Importer Save research while browsing online Using the Web Importer
Click ‘Save to Mendeley’ to import references from your search results
Select an article and import the reference to your library in one click. Scopus and ScienceDirect Organize Managing Your Library Manage your library
Open attached PDF files in integrated viewer
Star favorites Mark as read/unread Create category folders
See what type of document is attached (.pdf, .ppt, .docx, excel, etc.) Sync Sync your library to the Mendeley Cloud to access it anywhere & read on all your devices
• Mendeley backs up your library online • Access your articles anywhere • Get customized suggestions and add them to your library Search your documents
Full text search, or filter your results
Filter your documents by author, tag, publication, or keyword Tags Preferences Read and Annotate Using the built-in PDF Viewer The PDF viewer Read and work in the PDF viewer Annotate and highlight Look up term definitions Citations & Bibliography Using the Mendeley Citation Plug-In Install the citation plug-in The citation tool bar in word Generate in-text citations in word
1. Click ‘Insert or Edit Citation’
2. Search by author, title or year, or select a document from your Mendeley library
3. Select the article or book, and click ‘ok’ to automatically cite that text in Word Finding a reference in my library
Click “Go to Mendeley”
The ‘Cite’ button appears Merging citations Inserting your bibliography
1. Click ‘Insert Bibliography’
2. Choose your style
3. Done! Finding a CSL style
Select your style, or
Search Mendeley’s database of 6,000+ citation styles
https://www.mendeley.com/citation-styles/ The CSL editor
http://editor.citationstyles.org/about/ The CSL editor Research Network & Groups Join and create groups to share references Connect with colleagues Search for people and click ‘Follow’ to get regular updates. Find public groups
Search public groups on Mendeley Web Create groups Private groups Private groups let you share full text documents with a limited number of members Nobody outside the group can see the group or its files or members. Share your papers collaborate with your research team Share full-text documents with members of your private group
Share highlights and annotations
Each group member is assigned a different color for highlighting Discover New Research, Recommendations, and Impact Literature search Search the catalogue
Save new research to your library with one click
If the full text is available, you’ll see a download icon: Search the catalog online
Conduct advanced searches or browse by discipline
Find new research based on what is popular or the most recently added Quickly add new research
If the article is freely available, it’s a one- click addition to your library
Or use Open URL to locate the full text Find related research
Mendeley will suggest related research to help you find new articles Get statistics
Social statistics help you learn about others using this paper Create your research profile Showcase of your publications
1. Add your own publications 2. Mendeley adds the PDFs to the public database 3. Showcase them on your profile Open API
Mendeley Developer Portal: http://dev.mendeley.com Stay Up To Date Keeping in touch with Mendeley’s ongoing developments
RefWorks • Cloud-based bibliographic management tool • Create your own reference databases • Import references from library catalogues & databases • Manage & organize your references in folders • Search your references • Adding your own keywords & comments • Can be integrated with MS-Word to create in- text citations & reference list in preferred style Sign up a new RefWorks account https://refworks.proquest.com/
Use institutional email to register Access to the support center or video tutorials Export the records from iSearch
Add selected items to “Folder” for export Choose "Direct Export to RefWorks" and then Click "Save” Choose “Export to the new RefWorks”, then you’ll be asked to login to RefWorks
Import Completed! Export the records from ProQuest Export the records from Google Scholar Save to RefWorks
Add “Save to RefWorks” button to a browser to add references from other Internet resources
Organize stored references into (sub)folders Display a selected folder Create Bibliography
Create a reference list in APA Style from a selected folder Click on “Copy to Clipboard” to copy the bibliography Quick Cite
Select references for in-text citations and reference list in APA Style under “Quick Cite” Shared Folders Recognition of uploaded documents Simply drag-and-drop the document to RefWorks
The system will try to recognize the document and fill in the reference fields Import References from a Legacy RefWorks Account Additional Information
• RefWorks LibGuide http://proquest.libguides.com/newrefworks
• RefWorks Support Page http://www.proquest.com/go/upgrade-refworks
• RefWorks Webinars http://www.proquest.com/go/webinars-refworks
Zotero
Collect Grab your research with a single click.
Organize You’re never more than a click away from a bibliography
Cite It has never been easier to sort your research
Sync Your data is always where you need it
Collaborate Work together and share with the world. Firefox add-ons
Folders Reference List Reference Inforamtion (My Library) (In selected folder) (in selected reference) Toolbar in the Word 1 2 3 4 5 6 7
1. Insert Citation 2. Edit Citation 3. Insert Bibliography 4. Edit Bibliography 5. Refresh 6. Set Doc Preferences 7. Remove Codes Citation Windows Zotero Online Library
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