Heteroscedasticity
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Hypothesis Testing and Likelihood Ratio Tests
Hypottthesiiis tttestttiiing and llliiikellliiihood ratttiiio tttesttts Y We will adopt the following model for observed data. The distribution of Y = (Y1, ..., Yn) is parameter considered known except for some paramett er ç, which may be a vector ç = (ç1, ..., çk); ç“Ç, the paramettter space. The parameter space will usually be an open set. If Y is a continuous random variable, its probabiiillliiittty densiiittty functttiiion (pdf) will de denoted f(yy;ç) . If Y is y probability mass function y Y y discrete then f(yy;ç) represents the probabii ll ii tt y mass functt ii on (pmf); f(yy;ç) = Pç(YY=yy). A stttatttiiistttiiicalll hypottthesiiis is a statement about the value of ç. We are interested in testing the null hypothesis H0: ç“Ç0 versus the alternative hypothesis H1: ç“Ç1. Where Ç0 and Ç1 ¶ Ç. hypothesis test Naturally Ç0 § Ç1 = ∅, but we need not have Ç0 ∞ Ç1 = Ç. A hypott hesii s tt estt is a procedure critical region for deciding between H0 and H1 based on the sample data. It is equivalent to a crii tt ii call regii on: a critical region is a set C ¶ Rn y such that if y = (y1, ..., yn) “ C, H0 is rejected. Typically C is expressed in terms of the value of some tttesttt stttatttiiistttiiic, a function of the sample data. For µ example, we might have C = {(y , ..., y ): y – 0 ≥ 3.324}. The number 3.324 here is called a 1 n s/ n µ criiitttiiicalll valllue of the test statistic Y – 0 . S/ n If y“C but ç“Ç 0, we have committed a Type I error. -
Data 8 Final Stats Review
Data 8 Final Stats review I. Hypothesis Testing Purpose: To answer a question about a process or the world by testing two hypotheses, a null and an alternative. Usually the null hypothesis makes a statement that “the world/process works this way”, and the alternative hypothesis says “the world/process does not work that way”. Examples: Null: “The customer was not cheating-his chances of winning and losing were like random tosses of a fair coin-50% chance of winning, 50% of losing. Any variation from what we expect is due to chance variation.” Alternative: “The customer was cheating-his chances of winning were something other than 50%”. Pro tip: You must be very precise about chances in your hypotheses. Hypotheses such as “the customer cheated” or “Their chances of winning were normal” are vague and might be considered incorrect, because you don’t state the exact chances associated with the events. Pro tip: Null hypothesis should also explain differences in the data. For example, if your hypothesis stated that the coin was fair, then why did you get 70 heads out of 100 flips? Since it’s possible to get that many (though not expected), your null hypothesis should also contain a statement along the lines of “Any difference in outcome from what we expect is due to chance variation”. Steps: 1) Precisely state your null and alternative hypotheses. 2) Decide on a test statistic (think of it as a general formula) to help you either reject or fail to reject the null hypothesis. • If your data is categorical, a good test statistic might be the Total Variation Distance (TVD) between your sample and the distribution it was drawn from. -
Use of Statistical Tables
TUTORIAL | SCOPE USE OF STATISTICAL TABLES Lucy Radford, Jenny V Freeman and Stephen J Walters introduce three important statistical distributions: the standard Normal, t and Chi-squared distributions PREVIOUS TUTORIALS HAVE LOOKED at hypothesis testing1 and basic statistical tests.2–4 As part of the process of statistical hypothesis testing, a test statistic is calculated and compared to a hypothesised critical value and this is used to obtain a P- value. This P-value is then used to decide whether the study results are statistically significant or not. It will explain how statistical tables are used to link test statistics to P-values. This tutorial introduces tables for three important statistical distributions (the TABLE 1. Extract from two-tailed standard Normal, t and Chi-squared standard Normal table. Values distributions) and explains how to use tabulated are P-values corresponding them with the help of some simple to particular cut-offs and are for z examples. values calculated to two decimal places. STANDARD NORMAL DISTRIBUTION TABLE 1 The Normal distribution is widely used in statistics and has been discussed in z 0.00 0.01 0.02 0.03 0.050.04 0.05 0.06 0.07 0.08 0.09 detail previously.5 As the mean of a Normally distributed variable can take 0.00 1.0000 0.9920 0.9840 0.9761 0.9681 0.9601 0.9522 0.9442 0.9362 0.9283 any value (−∞ to ∞) and the standard 0.10 0.9203 0.9124 0.9045 0.8966 0.8887 0.8808 0.8729 0.8650 0.8572 0.8493 deviation any positive value (0 to ∞), 0.20 0.8415 0.8337 0.8259 0.8181 0.8103 0.8206 0.7949 0.7872 0.7795 0.7718 there are an infinite number of possible 0.30 0.7642 0.7566 0.7490 0.7414 0.7339 0.7263 0.7188 0.7114 0.7039 0.6965 Normal distributions. -
The Detection of Heteroscedasticity in Regression Models for Psychological Data
Psychological Test and Assessment Modeling, Volume 58, 2016 (4), 567-592 The detection of heteroscedasticity in regression models for psychological data Andreas G. Klein1, Carla Gerhard2, Rebecca D. Büchner2, Stefan Diestel3 & Karin Schermelleh-Engel2 Abstract One assumption of multiple regression analysis is homoscedasticity of errors. Heteroscedasticity, as often found in psychological or behavioral data, may result from misspecification due to overlooked nonlinear predictor terms or to unobserved predictors not included in the model. Although methods exist to test for heteroscedasticity, they require a parametric model for specifying the structure of heteroscedasticity. The aim of this article is to propose a simple measure of heteroscedasticity, which does not need a parametric model and is able to detect omitted nonlinear terms. This measure utilizes the dispersion of the squared regression residuals. Simulation studies show that the measure performs satisfactorily with regard to Type I error rates and power when sample size and effect size are large enough. It outperforms the Breusch-Pagan test when a nonlinear term is omitted in the analysis model. We also demonstrate the performance of the measure using a data set from industrial psychology. Keywords: Heteroscedasticity, Monte Carlo study, regression, interaction effect, quadratic effect 1Correspondence concerning this article should be addressed to: Prof. Dr. Andreas G. Klein, Department of Psychology, Goethe University Frankfurt, Theodor-W.-Adorno-Platz 6, 60629 Frankfurt; email: [email protected] 2Goethe University Frankfurt 3International School of Management Dortmund Leipniz-Research Centre for Working Environment and Human Factors 568 A. G. Klein, C. Gerhard, R. D. Büchner, S. Diestel & K. Schermelleh-Engel Introduction One of the standard assumptions underlying a linear model is that the errors are inde- pendently identically distributed (i.i.d.). -
8.5 Testing a Claim About a Standard Deviation Or Variance
8.5 Testing a Claim about a Standard Deviation or Variance Testing Claims about a Population Standard Deviation or a Population Variance ² Uses the chi-squared distribution from section 7-4 → Requirements: 1. The sample is a simple random sample 2. The population has a normal distribution (n −1)s 2 → Test Statistic for Testing a Claim about or ²: 2 = 2 where n = sample size s = sample standard deviation σ = population standard deviation s2 = sample variance σ2 = population variance → P-values and Critical Values: Use table A-4 with df = n – 1 for the number of degrees of freedom *Remember that table A-4 is based on cumulative areas from the right → Properties of the Chi-Square Distribution: 1. All values of 2 are nonnegative and the distribution is not symmetric 2. There is a different 2 distribution for each number of degrees of freedom 3. The critical values are found in table A-4 (based on cumulative areas from the right) --locate the row corresponding to the appropriate number of degrees of freedom (df = n – 1) --the significance level is used to determine the correct column --Right-tailed test: Because the area to the right of the critical value is 0.05, locate 0.05 at the top of table A-4 --Left-tailed test: With a left-tailed area of 0.05, the area to the right of the critical value is 0.95 so locate 0.95 at the top of table A-4 --Two-tailed test: Divide the significance level of 0.05 between the left and right tails, so the areas to the right of the two critical values are 0.975 and 0.025. -
Auditor: an R Package for Model-Agnostic Visual Validation and Diagnostics
auditor: an R Package for Model-Agnostic Visual Validation and Diagnostics APREPRINT Alicja Gosiewska Przemysław Biecek Faculty of Mathematics and Information Science Faculty of Mathematics and Information Science Warsaw University of Technology Warsaw University of Technology Poland Faculty of Mathematics, Informatics and Mechanics [email protected] University of Warsaw Poland [email protected] May 27, 2020 ABSTRACT Machine learning models have spread to almost every area of life. They are successfully applied in biology, medicine, finance, physics, and other fields. With modern software it is easy to train even a complex model that fits the training data and results in high accuracy on test set. The problem arises when models fail confronted with the real-world data. This paper describes methodology and tools for model-agnostic audit. Introduced tech- niques facilitate assessing and comparing the goodness of fit and performance of models. In addition, they may be used for analysis of the similarity of residuals and for identification of outliers and influential observations. The examination is carried out by diagnostic scores and visual verification. Presented methods were implemented in the auditor package for R. Due to flexible and con- sistent grammar, it is simple to validate models of any classes. K eywords machine learning, R, diagnostics, visualization, modeling 1 Introduction Predictive modeling is a process that uses mathematical and computational methods to forecast outcomes. arXiv:1809.07763v4 [stat.CO] 26 May 2020 Lots of algorithms in this area have been developed and are still being develop. Therefore, there are countless possible models to choose from and a lot of ways to train a new new complex model. -
Heteroscedastic Errors
Heteroscedastic Errors ◮ Sometimes plots and/or tests show that the error variances 2 σi = Var(ǫi ) depend on i ◮ Several standard approaches to fixing the problem, depending on the nature of the dependence. ◮ Weighted Least Squares. ◮ Transformation of the response. ◮ Generalized Linear Models. Richard Lockhart STAT 350: Heteroscedastic Errors and GLIM Weighted Least Squares ◮ Suppose variances are known except for a constant factor. 2 2 ◮ That is, σi = σ /wi . ◮ Use weighted least squares. (See Chapter 10 in the text.) ◮ This usually arises realistically in the following situations: ◮ Yi is an average of ni measurements where you know ni . Then wi = ni . 2 ◮ Plots suggest that σi might be proportional to some power of 2 γ γ some covariate: σi = kxi . Then wi = xi− . Richard Lockhart STAT 350: Heteroscedastic Errors and GLIM Variances depending on (mean of) Y ◮ Two standard approaches are available: ◮ Older approach is transformation. ◮ Newer approach is use of generalized linear model; see STAT 402. Richard Lockhart STAT 350: Heteroscedastic Errors and GLIM Transformation ◮ Compute Yi∗ = g(Yi ) for some function g like logarithm or square root. ◮ Then regress Yi∗ on the covariates. ◮ This approach sometimes works for skewed response variables like income; ◮ after transformation we occasionally find the errors are more nearly normal, more homoscedastic and that the model is simpler. ◮ See page 130ff and check under transformations and Box-Cox in the index. Richard Lockhart STAT 350: Heteroscedastic Errors and GLIM Generalized Linear Models ◮ Transformation uses the model T E(g(Yi )) = xi β while generalized linear models use T g(E(Yi )) = xi β ◮ Generally latter approach offers more flexibility. -
Power Comparisons of the Mann-Whitney U and Permutation Tests
Power Comparisons of the Mann-Whitney U and Permutation Tests Abstract: Though the Mann-Whitney U-test and permutation tests are often used in cases where distribution assumptions for the two-sample t-test for equal means are not met, it is not widely understood how the powers of the two tests compare. Our goal was to discover under what circumstances the Mann-Whitney test has greater power than the permutation test. The tests’ powers were compared under various conditions simulated from the Weibull distribution. Under most conditions, the permutation test provided greater power, especially with equal sample sizes and with unequal standard deviations. However, the Mann-Whitney test performed better with highly skewed data. Background and Significance: In many psychological, biological, and clinical trial settings, distributional differences among testing groups render parametric tests requiring normality, such as the z test and t test, unreliable. In these situations, nonparametric tests become necessary. Blair and Higgins (1980) illustrate the empirical invalidity of claims made in the mid-20th century that t and F tests used to detect differences in population means are highly insensitive to violations of distributional assumptions, and that non-parametric alternatives possess lower power. Through power testing, Blair and Higgins demonstrate that the Mann-Whitney test has much higher power relative to the t-test, particularly under small sample conditions. This seems to be true even when Welch’s approximation and pooled variances are used to “account” for violated t-test assumptions (Glass et al. 1972). With the proliferation of powerful computers, computationally intensive alternatives to the Mann-Whitney test have become possible. -
ROC Curve Analysis and Medical Decision Making
ROC curve analysis and medical decision making: what’s the evidence that matters for evidence-based diagnosis ? Piergiorgio Duca Biometria e Statistica Medica – Dipartimento di Scienze Cliniche Luigi Sacco – Università degli Studi – Via GB Grassi 74 – 20157 MILANO (ITALY) [email protected] 1) The ROC (Receiver Operating Characteristic) curve and the Area Under the Curve (AUC) The ROC curve is the statistical tool used to analyse the accuracy of a diagnostic test with multiple cut-off points. The test could be based on a continuous diagnostic indicant, such as a serum enzyme level, or just on an ordinal one, such as a classification based on radiological imaging. The ROC curve is based on the probability density distributions, in actually diseased and non diseased patients, of the diagnostician’s confidence in a positive diagnosis, and upon a set of cut-off points to separate “positive” and “negative” test results (Egan, 1968; Bamber, 1975; Swets, Pickett, 1982; Metz, 1986; Zhou et al, 2002). The Sensitivity (SE) – the proportion of diseased turned out to be test positive – and the Specificity (SP) – the proportion of non diseased turned out to be test negative – will depend on the particular confidence threshold the observer applies to partition the continuously distributed perceptions of evidence into positive and negative test results. The ROC curve is the plot of all the pairs of True Positive Rates (TPR = SE), as ordinate, and False Positive Rates (FPR = (1 – SP)), as abscissa, related to all the possible cut-off points. An ROC curve represents all of the compromises between SE and SP can be achieved, changing the confidence threshold. -
Estimating the Variance of a Propensity Score Matching Estimator for the Average Treatment Effect
Observational Studies 4 (2018) 71-96 Submitted 5/15; Published 3/18 Estimating the variance of a propensity score matching estimator for the average treatment effect Ronnie Pingel [email protected] Department of Statistics Uppsala University Uppsala, Sweden Abstract This study considers variance estimation when estimating the asymptotic variance of a propensity score matching estimator for the average treatment effect. We investigate the role of smoothing parameters in a variance estimator based on matching. We also study the properties of estimators using local linear estimation. Simulations demonstrate that large gains can be made in terms of mean squared error, bias and coverage rate by prop- erly selecting smoothing parameters. Alternatively, a residual-based local linear estimator could be used as an estimator of the asymptotic variance. The variance estimators are implemented in analysis to evaluate the effect of right heart catheterisation. Keywords: Average Causal Effect, Causal Inference, Kernel estimator 1. Introduction Matching estimators belong to a class of estimators of average treatment effects (ATEs) in observational studies that seek to balance the distributions of covariates in a treatment and control group (Stuart, 2010). In this study we consider one frequently used matching method, the simple nearest-neighbour matching with replacement (Rubin, 1973; Abadie and Imbens, 2006). Rosenbaum and Rubin (1983) show that instead of matching on covariates directly to remove confounding, it is sufficient to match on the propensity score. In observational studies the propensity score must almost always be estimated. An important contribution is therefore Abadie and Imbens (2016), who derive the large sample distribution of a nearest- neighbour propensity score matching estimator when using the estimated propensity score. -
Research Report Statistical Research Unit Goteborg University Sweden
Research Report Statistical Research Unit Goteborg University Sweden Testing for multivariate heteroscedasticity Thomas Holgersson Ghazi Shukur Research Report 2003:1 ISSN 0349-8034 Mailing address: Fax Phone Home Page: Statistical Research Nat: 031-77312 74 Nat: 031-77310 00 http://www.stat.gu.se/stat Unit P.O. Box 660 Int: +4631 773 12 74 Int: +4631 773 1000 SE 405 30 G6teborg Sweden Testing for Multivariate Heteroscedasticity By H.E.T. Holgersson Ghazi Shukur Department of Statistics Jonkoping International GOteborg university Business school SE-405 30 GOteborg SE-55 111 Jonkoping Sweden Sweden Abstract: In this paper we propose a testing technique for multivariate heteroscedasticity, which is expressed as a test of linear restrictions in a multivariate regression model. Four test statistics with known asymptotical null distributions are suggested, namely the Wald (W), Lagrange Multiplier (LM), Likelihood Ratio (LR) and the multivariate Rao F-test. The critical values for the statistics are determined by their asymptotic null distributions, but also bootstrapped critical values are used. The size, power and robustness of the tests are examined in a Monte Carlo experiment. Our main findings are that all the tests limit their nominal sizes asymptotically, but some of them have superior small sample properties. These are the F, LM and bootstrapped versions of Wand LR tests. Keywords: heteroscedasticity, hypothesis test, bootstrap, multivariate analysis. I. Introduction In the last few decades a variety of methods has been proposed for testing for heteroscedasticity among the error terms in e.g. linear regression models. The assumption of homoscedasticity means that the disturbance variance should be constant (or homoscedastic) at each observation. -
An Introduction to Logistic Regression: from Basic Concepts to Interpretation with Particular Attention to Nursing Domain
J Korean Acad Nurs Vol.43 No.2, 154 -164 J Korean Acad Nurs Vol.43 No.2 April 2013 http://dx.doi.org/10.4040/jkan.2013.43.2.154 An Introduction to Logistic Regression: From Basic Concepts to Interpretation with Particular Attention to Nursing Domain Park, Hyeoun-Ae College of Nursing and System Biomedical Informatics National Core Research Center, Seoul National University, Seoul, Korea Purpose: The purpose of this article is twofold: 1) introducing logistic regression (LR), a multivariable method for modeling the relationship between multiple independent variables and a categorical dependent variable, and 2) examining use and reporting of LR in the nursing literature. Methods: Text books on LR and research articles employing LR as main statistical analysis were reviewed. Twenty-three articles published between 2010 and 2011 in the Journal of Korean Academy of Nursing were analyzed for proper use and reporting of LR models. Results: Logistic regression from basic concepts such as odds, odds ratio, logit transformation and logistic curve, assumption, fitting, reporting and interpreting to cautions were presented. Substantial short- comings were found in both use of LR and reporting of results. For many studies, sample size was not sufficiently large to call into question the accuracy of the regression model. Additionally, only one study reported validation analysis. Conclusion: Nurs- ing researchers need to pay greater attention to guidelines concerning the use and reporting of LR models. Key words: Logit function, Maximum likelihood estimation, Odds, Odds ratio, Wald test INTRODUCTION The model serves two purposes: (1) it can predict the value of the depen- dent variable for new values of the independent variables, and (2) it can Multivariable methods of statistical analysis commonly appear in help describe the relative contribution of each independent variable to general health science literature (Bagley, White, & Golomb, 2001).