The Awkward Record of Fossil Whales Abstract the Habitat
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Stratigraphic Paleobiology of an Evolutionary Radiation: Taphonomy and Facies Distribution of Cetaceans in the Last 23 Million Years
Fossilia, Volume 2018: 15-17 Stratigraphic paleobiology of an evolutionary radiation: taphonomy and facies distribution of cetaceans in the last 23 million years Stefano Dominici1, Simone Cau2 & Alessandro Freschi2 1 Museo di Storia Naturale, Università degli Studi di Firenze, Firenze, Italy; [email protected] 2 Dipartimento di Scienze Chimiche, della Vita e della Sostenibilità Ambientale, Università degli Studi di Parma, Parma, Italy; cau.simo- [email protected], [email protected] BULLET-POINTS ABSTRACT KEYWORDS: • The majority of cetacean fossils are in Zanclean and Piacenzian deposits. Neogene; • Cetacean fossils are preferentially found in offshore paleosettings. Pliocene; • Pleistocene findings drop to a minimum, notwithstanding offshore strata are Cetaceans; well represented in the record. Taphonomy. • A taphonomic imprinting on the cetacean fossil record is hypothesised, con- nected with a radiation of whale-bone consumers of modern type. offer a particularly rich cetacean fossil record and an INTRODUCTION area where available studies allow to explore this key The study of the stratigraphy and taphonomy of Neo- time of cetacean evolution at a stratigraphic resolution gene cetaceans is a fundamental step to properly frame finer than the stage. An increase in cetaceans diversity the evolutionary radiation of this megafauna, at the is recorded around 3.2 – 3.0 Ma, in coincidence of top of the pelagic marine ecosystem. Major evolutio- the mid-Piacenzian climatic optimum, and a drastic nary steps have been summarised in recent -
Diversity Partitioning During the Cambrian Radiation
Diversity partitioning during the Cambrian radiation Lin Naa,1 and Wolfgang Kiesslinga,b aGeoZentrum Nordbayern, Paleobiology and Paleoenvironments, Friedrich-Alexander-Universität Erlangen-Nürnberg, 91054 Erlangen, Germany; and bMuseum für Naturkunde, Leibniz Institute for Research on Evolution and Biodiversity at the Humboldt University Berlin, 10115 Berlin, Germany Edited by Douglas H. Erwin, Smithsonian National Museum of Natural History, Washington, DC, and accepted by the Editorial Board March 10, 2015 (received for review January 2, 2015) The fossil record offers unique insights into the environmental and Results geographic partitioning of biodiversity during global diversifica- Raw gamma diversity exhibits a strong increase in the first three tions. We explored biodiversity patterns during the Cambrian Cambrian stages (informally referred to as early Cambrian in this radiation, the most dramatic radiation in Earth history. We as- work) (Fig. 1A). Gamma diversity dropped in Stage 4 and de- sessed how the overall increase in global diversity was partitioned clined further through the rest of the Cambrian. The pattern is between within-community (alpha) and between-community (beta) robust to sampling standardization (Fig. 1B) and insensitive to components and how beta diversity was partitioned among environ- including or excluding the archaeocyath sponges, which are po- ments and geographic regions. Changes in gamma diversity in the tentially oversplit (16). Alpha and beta diversity increased from Cambrian were chiefly driven by changes in beta diversity. The the Fortunian to Stage 3, and fluctuated erratically through the combined trajectories of alpha and beta diversity during the initial following stages (Fig. 2). Our estimate of alpha (and indirectly diversification suggest low competition and high predation within beta) diversity is based on the number of genera in published communities. -
Smith and De Leo Barkley Canyon Bone
Biodiversity, connectivity and ecosystem function in organic-rich whale-bone and wood- fall habitats in Barkley Canyon PIs Craig R. Smith1 and Fabio De Leo2 1University of Hawaii at Manoa, 2ONC Background: Organic-rich habitat islands support specialized communities throughout natural ecosystems and often play fundamental roles in maintaining alpha and beta diversity, thus facilitating adaptive radiation and evolutionary novelty. In the deep sea, whale-bone and wood falls occur widely and may contribute fundamentally to biodiversity and evolutionary novelty; nonetheless, large-scale patterns of biodiversity, connectivity and ecosystem function in these organic-rich metacommunies remain essentially unexplored. We propose to deploy whale bones and wood in Barkley Canyon at ONC POD3 as part of a novel comparative experimental approach, in which bone and wood substrates are being used to evaluate bathymetric, regional and inter-basin variations in biodiversity and connectivity, as well as interactions between biodiversity and ecosystem function, in whale-bone and wood- fall habitats at the deep-sea floor. The experiments in Barkley Canyon will test fundamental hypotheses concerning biodiversity and biogeography of resource-rich habitats in energy- and oxygen-limited deep-sea environments, and explore the utility of whale-bone and wood falls as model experimental systems to address patterns of connectivity and decomposer function in the deep sea. General Study Design: Two packages of humpback (Megaptera novaeangliae) ribs, and two blocks of Douglas Fir (Pseudotsuga menziesii), will be deployed by ROV on the seafloor at 890- m depth in Barkley Canyon, within view of the POD3 Video Camera (Fig. 1). After deployment, video monitoring of the bone/wood packages will occur every three hours for 5 minutes, with a different experimental package monitored during each 3-h interval; thus, each package will be monitored for two 5-minute periods per day. -
Editorial Submitting an Article
Journal of Natural Science Collections 2015: Volume 2 Editorial Welcome to the second Volume of the Journal The articles presented here aim to provide guid- of Natural Science Collections : a Journal for ance for working with natural science collec- you who work with natural science collections tions. If colleagues are wanting to undertake everyday. I hope that the articles in this Volume specific conservation work on areas in their prove to be interesting, and useful for all. collection, and are unsure as where to begin, please do contact one of the NatSCA commit- There are a large variety of topics covered in tee who will be able to advise. this Volume. The first article examines proto- cols for destructive sampling in natural history All the articles from Volume 1 are now available specimens, providing a nice case study and for free to view on the NatSCA website destructive sampling forms for researchers that (www.natsca.org). Please also have a look at can be adapted for your own institution. A pa- the NatSCA blog, which has more informal write per examines the fascinating natural history ups of views, book reviews and conferences displays of old and new, with surprising results. (http://naturalsciencecollections.wordpress.com/). An interesting article can assist with the mu- seum curators decision to lend specimens for I am very excited about the NatSCA 2015 con- research, where the article examines whether ference and AGM. The theme is all about how Micro-CT scanning affects DNA in specimens. we use traditional and social media to talk Conservators share their methods of cleaning a about our collections. -
The Potent Respiratory System of Osedax Mucofloris (Siboglinidae, Annelida) - a Prerequisite for the Origin of Bone-Eating Osedax?
The Potent Respiratory System of Osedax mucofloris (Siboglinidae, Annelida) - A Prerequisite for the Origin of Bone-Eating Osedax? Randi S. Huusgaard1, Bent Vismann1, Michael Ku¨ hl1,2, Martin Macnaugton1, Veronica Colmander1, Greg W. Rouse3, Adrian G. Glover4, Thomas Dahlgren5, Katrine Worsaae1* 1 Marine Biological Section, Department of Biology, University of Copenhagen, Helsingør, Denmark, 2 Plant Functional Biology and Climate Change Cluster, Department of Environmental Science, University of Technology Sydney, Sydney, Australia, 3 Scripps Institution of Oceanography, University of California San Diego, San Diego, California, United States of America, 4 Zoology Department, The Natural History Museum, London, United Kingdom, 5 Uni Environment/Uni Research, Bergen, Norway Abstract Members of the conspicuous bone-eating genus, Osedax, are widely distributed on whale falls in the Pacific and Atlantic Oceans. These gutless annelids contain endosymbiotic heterotrophic bacteria in a branching root system embedded in the bones of vertebrates, whereas a trunk and anterior palps extend into the surrounding water. The unique life style within a bone environment is challenged by the high bacterial activity on, and within, the bone matrix possibly causing O2 depletion, and build-up of potentially toxic sulphide. We measured the O2 distribution around embedded Osedax and showed that the bone microenvironment is anoxic. Morphological studies showed that ventilation mechanisms in Osedax are restricted to the anterior palps, which are optimized for high O2 uptake by possessing a large surface area, large surface to volume ratio, and short diffusion distances. The blood vascular system comprises large vessels in the trunk, which facilitate an ample supply of oxygenated blood from the anterior crown to a highly vascularised root structure. -
Phylogenomics of Tubeworms (Siboglinidae, Annelida) and Comparative Performance of Different Reconstruction Methods
Zoologica Scripta Phylogenomics of tubeworms (Siboglinidae, Annelida) and comparative performance of different reconstruction methods YUANNING LI,KEVIN M. KOCOT,NATHAN V. WHELAN,SCOTT R. SANTOS,DAMIEN S. WAITS, DANIEL J. THORNHILL &KENNETH M. HALANYCH Submitted: 28 January 2016 Li, Y., Kocot, K.M., Whelan, N.V., Santos, S.R., Waits, D.S., Thornhill, D.J. & Halanych, Accepted: 18 June 2016 K.M. (2016). Phylogenomics of tubeworms (Siboglinidae, Annelida) and comparative perfor- doi:10.1111/zsc.12201 mance of different reconstruction methods. —Zoologica Scripta, 00: 000–000. Deep-sea tubeworms (Annelida, Siboglinidae) represent dominant species in deep-sea chemosynthetic communities (e.g. hydrothermal vents and cold methane seeps) and occur in muddy sediments and organic falls. Siboglinids lack a functional digestive tract as adults, and they rely on endosymbiotic bacteria for energy, making them of evolutionary and physi- ological interest. Despite their importance, inferred evolutionary history of this group has been inconsistent among studies based on different molecular markers. In particular, place- ment of bone-eating Osedax worms has been unclear in part because of their distinctive biol- ogy, including harbouring heterotrophic bacteria as endosymbionts, displaying extreme sexual dimorphism and exhibiting a distinct body plan. Here, we reconstructed siboglinid evolutionary history using 12 newly sequenced transcriptomes. We parsed data into three data sets that accommodated varying levels of missing data, and we evaluate effects of miss- ing data on phylogenomic inference. Additionally, several multispecies-coalescent approaches and Bayesian concordance analysis (BCA) were employed to allow for a compar- ison of results to a supermatrix approach. Every analysis conducted herein strongly sup- ported Osedax being most closely related to the Vestimentifera and Sclerolinum clade, rather than Frenulata, as previously reported. -
Environmental Context for Understanding the Iconic Adaptive Radiation of Cichlid Fishes in Lake Malawi COMMENTARY Milan Malinskya,B and Walter Salzburgera,1
COMMENTARY Environmental context for understanding the iconic adaptive radiation of cichlid fishes in Lake Malawi COMMENTARY Milan Malinskya,b and Walter Salzburgera,1 Biologists rarely have access to reliable and detailed the lake’s central basin, obtaining a continuous 1.2-My historical records of environmental conditions, and record, a substantial extensionofanearlierstudycov- changes thereof, over extended periods of time. Where ering the most recent 140 ky (7). Combining the new such data exist, they can be instrumental for understand- data with geochemical and sedimentological variables ing evolutionary processes by providing a framework for (8), Ivory et al. (1) offer impressively detailed and in- interpreting patterns of organismal diversification, supple- formative insights into the lake’shistory. menting biogeography, molecular evidence, and fossils. To begin with, Ivory et al. (1) present convincing In PNAS, Ivory et al. (1) present a long and fully time- evidence that between 1.2 Ma and 800 ka Lake Malawi calibrated paleoecological record for Lake Malawi in was much shallower than it is today and underwent fre- Africa, which is home to the most species-rich extant quent but low-amplitude water-level changes. During adaptive radiation on Earth, consisting of ∼800 species this period, the basin alternated between marshland and of cichlid fishes. The ecological and morphological diver- a shallow lake, and was under the influence of a through- sity, as well as the rapidity of species formation, is extraor- flowing river, even at lowstands (Fig. 1). The authors dinary in Malawi cichlids, paralleled only by the cichlid further suggest that, by this time, the Ruhuhu River radiations in two other African Great Lakes: Victoria and functioned as outlet, through a connection with the Tanganyika (2). -
Paleobiology Was the Ediacaran–Cambrian Radiation a Unique
Paleobiology http://journals.cambridge.org/PAB Additional services for Paleobiology: Email alerts: Click here Subscriptions: Click here Commercial reprints: Click here Terms of use : Click here Was the Ediacaran–Cambrian radiation a unique evolutionary event? Douglas H. Erwin Paleobiology / Volume 41 / Issue 01 / January 2015, pp 1 - 15 DOI: 10.1017/pab.2014.2, Published online: 10 March 2015 Link to this article: http://journals.cambridge.org/abstract_S0094837314000025 How to cite this article: Douglas H. Erwin (2015). Was the Ediacaran–Cambrian radiation a unique evolutionary event?. Paleobiology, 41, pp 1-15 doi:10.1017/pab.2014.2 Request Permissions : Click here Downloaded from http://journals.cambridge.org/PAB, IP address: 62.8.109.237 on 11 Mar 2015 Paleobiology, 41(1), 2015, pp. 1–15 DOI: 10.1017/pab.2014.2 Was the Ediacaran–Cambrian radiation a unique evolutionary event? Douglas H. Erwin Abstract.—The extent of morphologic innovation during the Ediacaran–Cambrian diversification of animals was unique in the history of metazoan life. This episode was also associated with extensive changes in the redox state of the oceans, in the structure of benthic and pelagic marine ecosystems, in the nature of marine sediments, and in the complexity of developmental interactions in Eumetazoa. But did the phylogenetic and morphologic breadth of this episode simply reflect the unusual outcome of recurrent evolutionary processes, or was it the unique result of circumstances, whether in the physical environment, in developmental mechanisms, or in ecological interactions? To better characterize the uniqueness of the events, I distinguish among these components on the basis of the extent of sensitivity to initial conditions and unpredictability, which generates a matrix of possibilities from fully contingent to fully deterministic. -
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TABLE OF CONTENTS ABSTRACT………………………………………………………………………………..………2 INTRODUCTION …………………………………………………………………………………. 3 WHAT IS COMPLEXITY? ………………………………………………………………... 3 HIERARCHY ……………………………………………………………………………... 5 DIVISION OF LABOR & PARTS …………………………………………………………...7 COMPLEXITY VERSUS REDUNDANCY…………………………………………………… 8 REFINED DEFINITION OF COMPLEXITY ………………………………………………… 9 WHY FOCUS ON WHALES?..... ………………………………….......…………………..…9 METHODS………………………………………………………………………………..………14 APPLICATIONS …………………………………………………………………………. 20 SOURCES OF DATA ……………………………………………………………………... 20 RESULTS ………………………………………………………………………………..………..20 DISCUSSION….………………………………………………………………………………..… 28 TREND TOWARDS SIMPLICITY ...………………………………………………………...28 FEEDING BEHAVIOR OF EXTINCT CETACEANS ……………………………………..….. 30 ROLE OF HABITAT IN DENTITION SIMPLIFICATION ……………………………………. 31 CONCLUSIONS …………………………………………………………………………………...35 ACKNOWLEDGEMENTS ………………………………………………………………..………. .36 APPENDIX A……………………………………………………………………………..……… 37 APPENDIX B……………………………………………………………………………..……… 39 APPENDIX C……………………………………………………………………………..……… 40 REFERENCES……………………………………………………………………………………. 42 [1] ABSTRACT Over billions of years, evolution has given rise to organisms that have increased dramatically in complexity, from microbes alone to communities that include modern humans and the great whales. But change in individual lineages, occurring by chance and in adaptation to unpredictable circumstances, does not necessarily involve increasing complexity. Complexity may increase or decrease depending on the immediate situation. -
Macroevolutionary Patterns in the Evolutionary Radiation of Archosaurs (Tetrapoda: Diapsida) Stephen L
Earth and Environmental Science Transactions of the Royal Society of Edinburgh, 101, 367–382, 2011 (for 2010) Macroevolutionary patterns in the evolutionary radiation of archosaurs (Tetrapoda: Diapsida) Stephen L. Brusatte1,2, Michael J. Benton3, Graeme T. Lloyd4, Marcello Ruta3 and Steve C. Wang5 1 Division of Paleontology, American Museum of Natural History, Central Park West at 79th Street, New York, NY 10024, USA Email: [email protected] 2 Department of Earth and Environmental Sciences, Columbia University, New York, NY, USA 3 School of Earth Sciences, University of Bristol, Wills Memorial Building, Queens Road, Bristol, BS8 1RJ, UK 4 Department of Palaeontology, Natural History Museum, Cromwell Road, London SW7 5BD, UK 5 Department of Mathematics and Statistics, Swarthmore College, Swarthmore, PA 19081, USA ABSTRACT: The rise of archosaurs during the Triassic and Early Jurassic has been treated as a classic example of an evolutionary radiation in the fossil record. This paper reviews published studies and provides new data on archosaur lineage origination, diversity and lineage evolution, morpho- logical disparity, rates of morphological character change, and faunal abundance during the Triassic–Early Jurassic. The fundamental archosaur lineages originated early in the Triassic, in concert with the highest rates of character change. Disparity and diversity peaked later, during the Norian, but the most significant increase in disparity occurred before maximum diversity. Archo- saurs were rare components of Early–Middle Triassic faunas, but were more abundant in the Late Triassic and pre-eminent globally by the Early Jurassic. The archosaur radiation was a drawn-out event and major components such as diversity and abundance were discordant from each other. -
Dinosaurs in Decline Tens of Millions of Years Before Their Final Extinction
Dinosaurs in decline tens of millions of years before their final extinction Manabu Sakamotoa,1, Michael J. Bentonb, and Chris Vendittia,1 aSchool of Biological Sciences, University of Reading, Reading RG6 6BX, United Kingdom; and bSchool of Earth Sciences, University of Bristol, Bristol BS8 1RJ, United Kingdom Edited by Zhonghe Zhou, Chinese Academy of Sciences, Beijing, China, and approved March 1, 2016 (received for review October 30, 2015) Whether dinosaurs were in a long-term decline or whether they between such evolutionary dynamics can only be made using were reigning strong right up to their final disappearance at the phylogenies with taxa sampled through time. Cretaceous–Paleogene (K-Pg) mass extinction event 66 Mya has been debated for decades with no clear resolution. The dispute Results and Discussion has continued unresolved because of a lack of statistical rigor and Using a phylogenetic generalized linear mixed model (GLMM) in appropriate evolutionary framework. Here, for the first time to a Bayesian framework (15) and three recent large comprehensive our knowledge, we apply a Bayesian phylogenetic approach to dinosaur phylogenies comprising 420 (8) and 614 taxa [two trees model the evolutionary dynamics of speciation and extinction (16)], respectively, we found that the data are significantly better through time in Mesozoic dinosaurs, properly taking account of explained by a model, in which extinction rate exceeds speciation previously ignored statistical violations. We find overwhelming rate from ∼24 My before the K-Pg boundary, than the simpler support for a long-term decline across all dinosaurs and within alternative model [difference in deviance information criterion all three dinosaurian subclades (Ornithischia, Sauropodomorpha, (ΔDIC) between linear and quadratic models >11] (Fig. -
Jonsc Vol2-7.PDF
http://www.natsca.org Journal of Natural Science Collections Title: 100 years of deep‐sea tube worms in the collections of the Natural History Museum, London Author(s): Sherlock, E., Neal, L. & Glover, A. Source: Sherlock, E., Neal, L. & Glover, A. (2014). 100 years of deep‐sea tube worms in the collections of the Natural History Museum, London. Journal of Natural Science Collections, Volume 2, 47 ‐ 53. URL: http://www.natsca.org/article/2079 NatSCA supports open access publication as part of its mission is to promote and support natural science collections. NatSCA uses the Creative Commons Attribution License (CCAL) http://creativecommons.org/licenses/by/2.5/ for all works we publish. Under CCAL authors retain ownership of the copyright for their article, but authors allow anyone to download, reuse, reprint, modify, distribute, and/or copy articles in NatSCA publications, so long as the original authors and source are cited. Journal of Natural Science Collections 2015: Volume 2 100 years of deep-sea tubeworms in the collections of the Natural History Museum, London Emma Sherlock, Lenka Neal & Adrian G. Glover Life Sciences Department, The Natural History Museum, Cromwell Rd, London SW7 5BD, UK Received: 14th Sept 2014 Corresponding author: [email protected] Accepted: 18th Dec 2014 Abstract Despite having being discovered relatively recently, the Siboglinidae family of poly- chaetes have a controversial taxonomic history. They are predominantly deep sea tube- dwelling worms, often referred to simply as ‘tubeworms’ that include the magnificent me- tre-long Riftia pachyptila from hydrothermal vents, the recently discovered ‘bone-eating’ Osedax and a diverse range of other thin, tube-dwelling species.