Applications of Neutron Powder Diffraction in Materials Research
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The Theoretical Foundation of Spin-Echo Small-Angle Neutron
The Theoretical Foundation of Spin‐Echo Small‐Angle Neutron Scattering (SESANS) Applied in Colloidal System Wei‐Ren Chen, Gregory S. Smith, and Kenneth W. Herwig (NSSD ORNL) Yun Liu (NCNR NIST & Chemistry, University of Delaware) Li (Emily) Liu (Nuclear Engineering, RPI) Xin Li, Roger Pynn (Physics, Indiana University) Chwen‐Yang Shew (Chemistry, CUNY) UCANS‐II Indiana University July 08th 2011 Bloomington, IN Outline 1. Motivation — why Spin-Echo Small-Angle Neutron Scattering (SESANS)? 2. Basic Theory — what does SESANS measure? 3. Results and Discussions — what can SESANS do? (1). Straightforward observation of potential (2). Sensitivity to the local structure (3). Sensitivity to the structural heterogeneity 4. Summary Outline 1. Motivation — why Spin-Echo Small-Angle Neutron Scattering (SESANS)? 2. Basic Theory — what does SESANS measure? 3. Results and Discussions — what can SESANS do? (1). Straightforward observation of potential (2). Sensitivity to the local structure (3). Sensitivity to the structural heterogeneity 4. Summary Neutron Scattering Structure (Elastic Scatt.) Dynamics (Inelastic Scatt.) Small‐Angle Neutron Quasi‐Elastic Neutron Unpolarized Scattering (SANS), Scattering (QENS), beam Neutron Diffraction, Inelastic Neutron Scattering Neutron Reflectometry (INS) Polarized Spin‐Echo Small‐Angle Neutron Spin‐Echo (NSE) beam Neutron Scattering (SESANS) Neutron Scattering Structure (Elastic Scatt.) Dynamics (Inelastic Scatt.) Small‐Angle Neutron Quasi‐Elastic Neutron Unpolarized Scattering (SANS), Scattering (QENS), beam Neutron -
Neutron Scattering
Neutron Scattering John R.D. Copley Summer School on Methods and Applications of High Resolution Neutron Spectroscopy and Small Angle Neutron Scattering NIST Center for NeutronNCNR Summer Research, School 2011 June 12-16, 2011 Acknowledgements National Science Foundation NIST Center for Neutron (grant # DMR-0944772) Research (NCNR) Center for High Resolution Neutron Scattering (CHRNS) 2 NCNR Summer School 2011 (Slow) neutron interactions Scattering plus Absorption Total =+Elastic Inelastic scattering scattering scattering (diffraction) (spectroscopy) includes “Quasielastic neutron Structure Dynamics scattering” (QENS) NCNR Summer School 2011 3 Total, elastic, and inelastic scattering Incident energy Ei E= Ei -Ef Scattered energy Ef (“energy transfer”) Total scattering: Elastic scattering: E = E (i.e., E = 0) all Ef (i.e., all E) f i Inelastic scattering: E ≠ E (i.e., E ≠ 0) D f i A M M Ef Ei S Ei D S Diffractometer Spectrometer (Some write E = Ef –Ei) NCNR Summer School 2011 4 Kinematics mv= = k 1 222 Emvk2m==2 = Scattered wave (m is neutron’s mass) vector k , energy E 2θ f f Incident wave vector ki, energy Ei N.B. The symbol for scattering angle in Q is wave vector transfer, SANS experiments is or “scattering vector” Q =Q is momentum transfer θ, not 2θ. Q = ki - kf (For x-rays, Eck = = ) (“wave vector transfer”) NCNR Summer School 2011 5 Elastic scattering Q = ki - kf G In real space k In reciprocal space f G G G kf Q ki 2θ 2θ G G k Q i E== 0 kif k Q =θ 2k i sin NCNR Summer School 2011 6 Total scattering, inelastic scattering Q = ki - kf G kf G Q Qkk2kkcos2222= +− θ 2θ G if if ki At fixed scattering angle 2θ, the magnitude (and the direction) of Q varies with the energy transfer E. -
Optimizing Crystal Volume for Neutron Diffraction: D-Xylose Isomerase
Eur Biophys J (2006) 35:621–632 DOI 10.1007/s00249-006-0068-4 ARTICLE Optimizing crystal volume for neutron diffraction: D-xylose isomerase Edward H. Snell Æ Mark J. van der Woerd Æ Michael Damon Æ Russell A. Judge Æ Dean A. A. Myles Æ Flora Meilleur Received: 15 February 2006 / Revised: 27 March 2006 / Accepted: 4 April 2006 / Published online: 25 May 2006 Ó EBSA 2006 Abstract Neutron diffraction is uniquely sensitive to studies for a larger number of samples that require hydrogen positions and protonation state. In that information on hydrogen position and/or protonation context structural information from neutron data is state. complementary to that provided through X-ray dif- fraction. However, there are practical obstacles to overcome in fully exploiting the potential of neutron diffraction, i.e. low flux and weak scattering. Several approaches are available to overcome these obstacles Introduction and we have investigated the simplest: increasing the diffracting volume of the crystals. Volume is a quan- Neutron diffraction tifiable metric that is well suited for experimental de- sign and optimization techniques. By using response X-ray structural crystallography is a powerful tech- surface methods we have optimized the xylose isom- nique to visualize the machinery of life on a molecular erase crystal volume, enabling neutron diffraction scale. However, hydrogen atoms are not usually seen while we determined the crystallization parameters because X-ray scattering from hydrogen atoms is weak with a minimum of experiments. Our results suggest a compared to other atoms. Knowledge of the location of systematic means of enabling neutron diffraction hydrogen atoms and water molecules is often necessary to completely understand the reaction mechanisms, pathways and structure–function relationships. -
Neutron Scattering Facilities in Europe Present Status and Future Perspectives
2 ESFRI Physical Sciences and Engineering Strategy Working Group Neutron Landscape Group Neutron scattering facilities in Europe Present status and future perspectives ESFRI scrIPTa Vol. 1 ESFRI Scripta Volume I Neutron scattering facilities in Europe Present status and future perspectives ESFRI Physical Sciences and Engineering Strategy Working Group Neutron Landscape Group i ESFRI Scripta Volume I Neutron scattering facilities in Europe - Present status and future perspectives Author: ESFRI Physical Sciences and Engineering Strategy Working Group - Neutron Landscape Group Scientific editors: Colin Carlile and Caterina Petrillo Foreword Technical editors: Marina Carpineti and Maddalena Donzelli ESFRI Scripta series will publish documents born out of special studies Cover image: Diffraction pattern from the sugar-binding protein Gal3c with mandated by ESFRI to high level expert groups, when of general interest. lactose bound collected using LADI-III at ILL. Picture credits should be given This first volume reproduces the concluding report of an ad-hoc group to D. Logan (Lund University) and M. Blakeley (ILL) mandated in 2014 by the Physical Science and Engineering Strategy Design: Promoscience srl Work Group (PSE SWG) of ESFRI, to develop a thorough analysis of the European Landscape of Research Infrastructures devoted to Neutron Developed on behalf of the ESFRI - Physical Sciences and Engineering Strategy Scattering, and its evolution in the next decades. ESFRI felt the urgency Working Group by the StR-ESFRI project and with the support of the ESFRI of such analysis, since many reactor-based neutron sources will be closed Secretariat down in the next years due to national decisions, while the European The StR-ESFRI project has received funding from the European Union’s Spallation Source (ESS) in Lund will be fully operative only in the mid Horizon 2020 research and innovation programme under grant agreement or late 2020s. -
Small Angle Scattering in Neutron Imaging—A Review
Journal of Imaging Review Small Angle Scattering in Neutron Imaging—A Review Markus Strobl 1,2,*,†, Ralph P. Harti 1,†, Christian Grünzweig 1,†, Robin Woracek 3,† and Jeroen Plomp 4,† 1 Paul Scherrer Institut, PSI Aarebrücke, 5232 Villigen, Switzerland; [email protected] (R.P.H.); [email protected] (C.G.) 2 Niels Bohr Institute, University of Copenhagen, Copenhagen 1165, Denmark 3 European Spallation Source ERIC, 225 92 Lund, Sweden; [email protected] 4 Department of Radiation Science and Technology, Technical University Delft, 2628 Delft, The Netherlands; [email protected] * Correspondence: [email protected]; Tel.: +41-56-310-5941 † These authors contributed equally to this work. Received: 6 November 2017; Accepted: 8 December 2017; Published: 13 December 2017 Abstract: Conventional neutron imaging utilizes the beam attenuation caused by scattering and absorption through the materials constituting an object in order to investigate its macroscopic inner structure. Small angle scattering has basically no impact on such images under the geometrical conditions applied. Nevertheless, in recent years different experimental methods have been developed in neutron imaging, which enable to not only generate contrast based on neutrons scattered to very small angles, but to map and quantify small angle scattering with the spatial resolution of neutron imaging. This enables neutron imaging to access length scales which are not directly resolved in real space and to investigate bulk structures and processes spanning multiple length scales from centimeters to tens of nanometers. Keywords: neutron imaging; neutron scattering; small angle scattering; dark-field imaging 1. Introduction The largest and maybe also broadest length scales that are probed with neutrons are the domains of small angle neutron scattering (SANS) and imaging. -
Single Crystal Diffuse Neutron Scattering
Review Single Crystal Diffuse Neutron Scattering Richard Welberry 1,* ID and Ross Whitfield 2 ID 1 Research School of Chemistry, Australian National University, Canberra, ACT 2601, Australia 2 Neutron Scattering Division, Oak Ridge National Laboratory, Oak Ridge, TN 37831, USA; whitfi[email protected] * Correspondence: [email protected]; Tel.: +61-2-6125-4122 Received: 30 November 2017; Accepted: 8 January 2018; Published: 11 January 2018 Abstract: Diffuse neutron scattering has become a valuable tool for investigating local structure in materials ranging from organic molecular crystals containing only light atoms to piezo-ceramics that frequently contain heavy elements. Although neutron sources will never be able to compete with X-rays in terms of the available flux the special properties of neutrons, viz. the ability to explore inelastic scattering events, the fact that scattering lengths do not vary systematically with atomic number and their ability to scatter from magnetic moments, provides strong motivation for developing neutron diffuse scattering methods. In this paper, we compare three different instruments that have been used by us to collect neutron diffuse scattering data. Two of these are on a spallation source and one on a reactor source. Keywords: single crystal; diffuse scattering; neutrons; spallation source; time-of-flight 1. Introduction Bragg scattering, which is used in conventional crystallography, gives only information about the average crystal structure. Diffuse scattering from single crystals, on the other hand, is a prime source of local structural information. There is now a wealth of evidence to show that the more local structure is investigated the more we are obliged to reassess our understanding of crystalline structure and behaviour [1]. -
Opportunities and Challenges in Neutron Crystallography
EPJ Web of Conferences 236, 02001 (2020) https://doi.org/10.1051/epjconf/202023602001 JDN 24 Opportunities and challenges in neutron crystallography Nathan Richard Zaccai1,*, and Nicolas Coquelle2,† 1CIMR, University of Cambridge, Cambridge CB2 0XY, United Kingdom 2Institut Laue Langevin, 38042 Grenoble Cedex 9, France Abstract. Neutron and X-ray crystallography are complementary to each other. While X-ray scattering is directly proportional to the number of electrons of an atom, neutrons interact with the atomic nuclei themselves. Neutron crystallography therefore provides an excellent alternative in determining the positions of hydrogens in a biological molecule. In particular, since highly polarized hydrogen atoms (H+) do not have electrons, they cannot be observed by X-rays. Neutron crystallography has its own limitations, mainly due to inherent low flux of neutrons sources, and as a consequence, the need for much larger crystals and for different data collection and analysis strategies. These technical challenges can however be overcome to yield crucial structural insights about protonation states in enzyme catalysis, ligand recognition, as well as the presence of unusual hydrogen bonds in proteins. 1 Introduction Although X-ray crystallography has become the workhorse of structural biology, Neutron crystallography has several advantages to offer in the structural analysis of biological molecules. X-rays and neutrons interact differently with matter in general, and with biological macromolecules in particular. These two crystallography approaches are therefore complementary to each other [1]. While X-ray scattering is directly proportional to the number of electrons of an atom, neutrons interact with the atomic nuclei themselves. In this perspective, hydrogen atoms, which represent ~50% of the atomistic composition of proteins and DNA, are hardly visible using X-ray crystallography, while they can be observed in nuclear density maps derived from neutron diffraction data even at moderate resolution (2.5Å and higher). -
Powder Methods Handout
Powder Methods Beyond Simple Phase ID Possibilities, Sample Preparation and Data Collection Cora Lind-Kovacs Department of Chemistry & Biochemistry The University of Toledo History of Powder Diffraction Discovery of X-rays: Roentgen, 1895 (Nobel Prize 1901) Diffraction of X-rays: von Laue, 1912 (Nobel Prize 1914) Diffraction laws: Bragg & Bragg, 1912-1913 (Nobel Prize 1915) Powder diffraction: Developed independently in two countries: – Debye and Scherrer in Germany, 1916 – Hull in the United States, 1917 Original methods: Film based First commercial diffractometer: Philips, 1947 (PW1050) 2 http://www.msm.cam.ac.uk/xray/images/pdiff3.jpg Original Powder Setups Oldest method: Debye-Scherrer camera - Capillary sample surrounded by cylindrical film - Simple, cheap setup 3 Cullity; “Elements of X-ray Diffraction” Modern Powder Setups Powder diffractometers - theta-theta or theta-2theta - point or area detectors Scintag theta-theta diffractometer with Peltier cooled solid-state detector Inel diffractometer with 120° PSD (position sensitive detector) 4 Physical Basis of Powder Diffraction Powder diffraction obeys the same laws of physics as single crystal diffraction Location of diffraction peaks is given by Bragg’s law - 2d sin = n Intensity of diffraction peaks is proportional to square of structure factor amplitude N 2 2 2 2 - .F(hkl) f j exp(2i(hx j ky j lz j ))·exp[-8 u (sin ()/ ] j1 5 Goal of crystallography: Get structure Single crystal experiments - Grow crystals (often hardest step) - Collect data (usually easy, both -
Neutron Spin Echo
Neutron spin echo Thomas Keller Max Planck Institute for Solid State Research conventional spectrometer (triple axis) slow dynamics, large molecules : small energies -> use cold neutrons, backscattering problem: resolution ~ 1/intensity solution: neutron spin echo The Bible Ferenc Mezei a spin-echo spectrometer (old IN11) basic idea: use neutron spin as a internal clock example polarization magnetic field -> de Gennes reptation A. Wischnewski, et al., PRL 88, 058301 (2002). outline - from Larmor precession to spin-echo - NSE instruments for quasi elastic scattering - phonon and magnon lifetimes (spin-echo + triple axis) - high resolution diffraction (Larmor diffraction) Larmor precession spin echo -> Larmor precession B ωL ωL = γ B s γ gyromagnetic ratio = 3kHz/Gauss θ θ = const. cos / sin cos spinor: polarization: = sin sin sin / cos pure QM with plane waves: Golub, Am. J. Phys. example earth magnetic field: 0.4G -> νL = 1.2kHz one precession (λ=4Å, v=1000m/s): 0.8m typ. spin-echo field: 2kG (0.2T) -> νL = 6MHz one precession (λ=4Å, v=1000m/s): 0.17mm polarization I n N+ N- s θ cos θ cos polarization II B n T=1 P T=0 B P θ P 1cos guide fields retain the direction of s (or P) longitudinal (coils) parallel anti-parallel transverse (permanent) slow (adiabatic) change of guide field what means 'slow'? / 3956/λ[Å] rotation frequency: ∆ λ[Å] -> powerful concept: rotating coordinates transformation to a rotating system z z ωr B0 B0 -ωr/γ y y' ωL=γB0 B s eff s x x' Rabi, Ramsey, Schwinger, Rev. Mod. Phys. 26, 167 (1954). rotating guide field z ωr Beff -ωr/γ α s Bg tan cos α should be small -> ≪ rotation freq. -
Structure Determination from Powder Diffraction Data. Most of Us Are Familiar with the More Common Process of Structure Refinement by the Rietveld Method
COMMISSION ON POWDER DIFFRACTION INTERNATIONAL UNION OF CRYSTALLOGRAPHY http://www.iucr.org/iucr-top/comm/cpd/ NEWSLETTER No. 25, July 2001 http://www.iucr.org/iucr-top/comm/cpd/Newsletters/ . IN THIS ISSUE Structure Determination from Powder Diffraction Data (Bill David, Editor) CPD chairman’s message, Paolo Scardi 2 Ab-initio structure determination of oligopeptides from powder diffraction data 20 Editor’s message, Bill David 2 K D M Harris, R L Johnston, E Tedesco and G W Turner CPD projects: 3 Correlating crystal structure with the physical Quantitative Phase Analysis RR, Ian Madsen properties of pharmaceutical compounds 22 Size-Strain RR, Davor Balzar N Shankland, W I F David, K Shankland, A Kennedy, C S Frampton and A Florence WWW sites related to Powder Diffraction 3 EXPO: New developments 23 A Altomare, C Giacovazzo, A G G Moliterni and R Rizzi IUCr Commission on Powder Diffraction 4 Structure determination from powder diffraction data News from ICDD and IXAS 26 Revisiting the 1998 SDPD Round Robin 7 Computer Corner, L M D Cranswick 28 A Le Bail and L M D Cranswick What’s On 35 A 117-atom structure from powder diffraction data 9 L B McCusker, Ch Baerlocher and T Wessels Companies 36 Drug polymorphism and powder diffraction 12 How to receive the CPD Newsletter 36 P Sieger, R Dinnebier, K Shankland and W I F David Calls for contributions to CPD newsletter 26 36 Malaria, synchrotron radiation and Monte Carlo 14 P W Stephens, S Pagola, D S Bohle and A D Kosar A case of mistaken identity: metastable Me2SBr2 16 A N Fitch, G B M Vaughan and A J Mora Combined Rietveld and stereochemical- restraint refinement with high resolution powder diffraction offers a new approach for obtaining protein-drug structures 17 R B Von Dreele On the reliablility of Rwp in structure prediction 19 L Smrcok and M Durík ISSN 1591-9552 CPD Chairman’s Message The CPD Newsletter is a very popular publication – more than 2000 people have now asked to receive a copy. -
Chapter 1 MAGNETIC NEUTRON SCATTERING
Chapter 1 MAGNETIC NEUTRON SCATTERING. And Recent Developments in the Triple Axis Spectroscopy Igor A . Zaliznyak'" and Seung-Hun Lee(2) (')Department of Physics. Brookhaven National Laboratory. Upton. New York 11973-5000 (')National Institute of Standards and Technology. Gaithersburg. Maryland 20899 1. Introduction..................................................................................... 2 2 . Neutron interaction with matter and scattering cross-section ......... 6 2.1 Basic scattering theory and differential cross-section................. 7 2.2 Neutron interactions and scattering lengths ................................ 9 2.2.1 Nuclear scattering length .................................................. 10 2.2.2 Magnetic scattering length ................................................ 11 2.3 Factorization of the magnetic scattering length and the magnetic form factors ............................................................................................... 16 2.3.1 Magnetic form factors for Hund's ions: vector formalism19 2.3.2 Evaluating the form factors and dipole approximation..... 22 2.3.3 One-electron spin form factor beyond dipole approximation; anisotropic form factors for 3d electrons..................... 27 3 . Magnetic scattering by a crystal ................................................... 31 3.1 Elastic and quasi-elastic magnetic scattering............................ 34 3.2 Dynamical correlation function and dynamical magnetic susceptibility ............................................................................................ -
Neutron Scattering As a Powerful Tool to Investigate Magnetic Shape Memory Alloys: a Review
metals Review Neutron Scattering as a Powerful Tool to Investigate Magnetic Shape Memory Alloys: A Review Natalia A. Río-López 1, Patricia Lázpita 1,2, Daniel Salazar 1, Viktor I. Petrenko 1,3 , Fernando Plazaola 2 , Volodymyr Chernenko 1,2,3 and Jose M. Porro 1,3,* 1 BCMaterials, Basque Center for Materials, Applications & Nanostructures, 48940 Leioa, Spain; [email protected] (N.A.R.-L.); [email protected] (P.L.); [email protected] (D.S.); [email protected] (V.I.P.); [email protected] (V.C.) 2 Department of Electricity and Electronics, Faculty of Science and Technology, University of the Basque Country, 48080 Bilbao, Spain; [email protected] 3 Ikerbasque, Basque Foundation for Science, 48009 Bilbao, Spain * Correspondence: [email protected] Abstract: Magnetic shape memory alloys (MSMAs) are an interesting class of smart materials characterized by undergoing macroscopic deformations upon the application of a pertinent stimulus: temperature, stress and/or external magnetic fields. Since the deformation is rapid and contactless, these materials are being extensively investigated for a plethora of applications, such as sensors and actuators for the medical, automotive and space industries, energy harvesting and damping devices, among others. These materials also exhibit a giant magnetocaloric effect, whereby they are very promising for magnetic refrigeration. The applications in which they can be used are extremely dependent on the material properties, which are, in turn, greatly conditioned by the structure, atomic ordering and magnetism of a material. Particularly, exploring the material structure Citation: Río-López, N.A.; Lázpita, is essential in order to push forward the current application limitations of the MSMAs.