C-PHYCOCYANIN EXTRACTION from Spirulina Platensis WET BIOMASS
Total Page:16
File Type:pdf, Size:1020Kb
Load more
Recommended publications
-
Scholarworks@UNO
University of New Orleans ScholarWorks@UNO University of New Orleans Theses and Dissertations Dissertations and Theses Summer 8-4-2011 Identification and characterization of enzymes involved in the biosynthesis of different phycobiliproteins in cyanobacteria Avijit Biswas University of New Orleans, [email protected] Follow this and additional works at: https://scholarworks.uno.edu/td Part of the Biochemistry, Biophysics, and Structural Biology Commons Recommended Citation Biswas, Avijit, "Identification and characterization of enzymes involved in the biosynthesis of different phycobiliproteins in cyanobacteria" (2011). University of New Orleans Theses and Dissertations. 446. https://scholarworks.uno.edu/td/446 This Dissertation-Restricted is protected by copyright and/or related rights. It has been brought to you by ScholarWorks@UNO with permission from the rights-holder(s). You are free to use this Dissertation-Restricted in any way that is permitted by the copyright and related rights legislation that applies to your use. For other uses you need to obtain permission from the rights-holder(s) directly, unless additional rights are indicated by a Creative Commons license in the record and/or on the work itself. This Dissertation-Restricted has been accepted for inclusion in University of New Orleans Theses and Dissertations by an authorized administrator of ScholarWorks@UNO. For more information, please contact [email protected]. Identification and characterization of enzymes involved in biosynthesis of different phycobiliproteins in cyanobacteria A Thesis Submitted to the Graduate Faculty of the University of New Orleans in partial fulfillment of the requirements for the degree of Doctor of Philosophy In Chemistry (Biochemistry) By Avijit Biswas B.S. -
Extractuion, Partial Pirificatuon and Anti
J. Algal Biomass Utln. 2012, 3 (3): 7– 11 Purification, and antibacterial activity of phycocyanin from Spirulina © PHYCO SPECTRUM INC Extraction, partial purification, and antibacterial activity of phycocyanin from Spirulina isolated from fresh water body against various human pathogens M. Muthulakshmi, A. Saranya, M. Sudha, and G. Selvakumar* Department of Microbiology and Biochemistry, Nadar Saraswathi College of Arts & Science, Theni 625531, Tamil Nadu, India *Department of Microbiology, Department of Distance Education, Alagappa University, Karaikudi, Tamil Nadu, India ABSTRACT The phycobilin pigments are intensively fluorescence and water soluble. They are categorized into three types: pigments containing high energies (phycoerythrins), intermediate energies (phycocyanins), and low energies (allophycocyanins). Among them, crude-phycocyanin (c-pc) has been considered to be the most preferred one. The present study was undertaken to evaluate the antibacterial activity of c-pc which was isolated from the blue green algae Spirulina platensis. C-pc was extracted by sonication, followed by centrifugation and filtration. The crude form of phycocyanin was purified by ammonium sulphate precipitation, membrane filtration, and dialysis method. Antibacterial activities were obtained from various human pathogens. The results showed that all Spirulina maxima extracts exhibited great potential antibacterial activities against five bacterial strains with inhibition zones of range 7–13 mm. Key words: Spirulina maxima, c-phycocyanin, antibacterial activity INTRODUCTION the cells enclosed in a thin sheath. Spirulina has a Microalgae are a very diverse group of organisms very long history of being served as a source of food that consist of both prokaryotic and eukaryotic for human being. forms. Although most microalgae are phototropic some species are also capable of showing Spirulina is a spiral filament generally found in heterotrophic growth. -
Nobel Lecture by Roger Y. Tsien
CONSTRUCTING AND EXPLOITING THE FLUORESCENT PROTEIN PAINTBOX Nobel Lecture, December 8, 2008 by Roger Y. Tsien Howard Hughes Medical Institute, University of California San Diego, 9500 Gilman Drive, La Jolla, CA 92093-0647, USA. MOTIVATION My first exposure to visibly fluorescent proteins (FPs) was near the end of my time as a faculty member at the University of California, Berkeley. Prof. Alexander Glazer, a friend and colleague there, was the world’s expert on phycobiliproteins, the brilliantly colored and intensely fluorescent proteins that serve as light-harvesting antennae for the photosynthetic apparatus of blue-green algae or cyanobacteria. One day, probably around 1987–88, Glazer told me that his lab had cloned the gene for one of the phycobilipro- teins. Furthermore, he said, the apoprotein produced from this gene became fluorescent when mixed with its chromophore, a small molecule cofactor that could be extracted from dried cyanobacteria under conditions that cleaved its bond to the phycobiliprotein. I remember becoming very excited about the prospect that an arbitrary protein could be fluorescently tagged in situ by genetically fusing it to the phycobiliprotein, then administering the chromophore, which I hoped would be able to cross membranes and get inside cells. Unfortunately, Glazer’s lab then found out that the spontane- ous reaction between the apoprotein and the chromophore produced the “wrong” product, whose fluorescence was red-shifted and five-fold lower than that of the native phycobiliprotein1–3. An enzyme from the cyanobacteria was required to insert the chromophore correctly into the apoprotein. This en- zyme was a heterodimer of two gene products, so at least three cyanobacterial genes would have to be introduced into any other organism, not counting any gene products needed to synthesize the chromophore4. -
Phycobiliprotein Evolution (Phycoerythrin/Phycobilisomes/Cell Wall/Photosynthesis/Prokaryotic Evolution) THOMAS A
Proc. Natd Acad. Sci. USA Vol. 78, No. 11, pp. 6888-6892, November 1981 Botany Morphology of a novel cyanobacterium and characterization of light-harvesting complexes from it: Implications for phycobiliprotein evolution (phycoerythrin/phycobilisomes/cell wall/photosynthesis/prokaryotic evolution) THOMAS A. KURSAR*, HEWSON SwIFTt, AND RANDALL S. ALBERTEt tBarnes Laboratory, Department ofBiology, and *Department of Biophysics and Theoretical Biology, University of Chicago, Chicago, Illinois 60637 Contributed by Hewson Swift, July 2, 1981 ABSTRACT The morphology of the marine cyanobacterium After examining the in vivo spectral properties of several of DC-2 and two light-harvesting complexes from it have been char- the recently discovered species ofcyanobacteria, it came to our acterized. DC-2 has an outer cell wall sheath not previously ob- attention that one of the PE-containing types termed DC-2 served, the purified phycoerythrin shows many unusual proper- showed some rather unusual features. Further study revealed ties that distinguish it from all phycoerythrins characterized to that this species possesses novel PE, phycobilisomes, and outer date, and isolated phycobilisomes have a single absorption band cell wall sheath; these characteristics suggest that it should be at 640 nm in the phycocyanin-allophycocyanin region of the spec- trum. On the basis of these observations we suggest that DC-2, placed in a new phylogenetic branch for the cyanobacteria. rather than being a member of the Synechococcus group, should be placed in its own taxonomic group. In addition, the particular MATERIALS AND METHODS properties of the isolated phycoerythrin suggest that it may be An axenic representative of an early stage in the evolution of the phyco- isolate of Synechococcus sp., clone DC-2, obtained erythrins. -
An Early Requisite for Efficient Photosynthesis in Cyanobacteria
EXCLI Journal 2015;14:268-289 – ISSN 1611-2156 Received: December 16, 2014, accepted: January 16, 2015, published: February 20, 2015 Original article: THE PHYCOBILISOMES: AN EARLY REQUISITE FOR EFFICIENT PHOTOSYNTHESIS IN CYANOBACTERIA Niraj Kumar Singh1,$, Ravi Raghav Sonani2,$, Rajesh Prasad Rastogi2,*, Datta Madamwar2,* 1 Shri A. N. Patel PG Institute (M. B. Patel Science College Campus), Anand, Sardargunj, Anand – 388001, Gujarat, India 2 BRD School of Biosciences, Sardar Patel Maidan, Vadtal Road, Post Box No. 39, Sardar Patel University, Vallabh Vidyanagar 388 120, Anand, Gujarat, India * Corresponding authors: Tel.: +91 02692 229380; fax: +91 02692 231042/236475; E-mail addresses: [email protected] (R.P. Rastogi), [email protected] (D. Madamwar) $ These authors have contributed equally. http://dx.doi.org/10.17179/excli2014-723 This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/). ABSTRACT Cyanobacteria trap light energy by arrays of pigment molecules termed “phycobilisomes (PBSs)”, organized proximal to "reaction centers" at which chlorophyll perform the energy transduction steps with highest quantum efficiency. PBSs, composed of sequential assembly of various chromophorylated phycobiliproteins (PBPs), as well as nonchromophoric, basic and hydrophobic polypeptides called linkers. Atomic resolution structure of PBP is a heterodimer of two structurally related polypeptides but distinct specialised polypeptides- α and β, made up of seven alpha-helices each which played a crucial step in evolution of PBPs. PBPs carry out various light de- pendent responses such as complementary chromatic adaptation. The aim of this review is to summarize and discuss the recent progress in this field and to highlight the new and the questions that remain unresolved. -
Phycobiliproteins and Tandem Conjugates
Phycobiliproteins & Tandem Conjugates Multicolor Flow Cytometric Detection with Superior Fluorescence AAT Bioquest® Overview of Phycobiliproteins Phycobiliproteins are a family of photosynthetic light-harvesting proteins derived from microalgae and cyanobacteria. These proteins contain covalently attached linear tetrapyrrole groups, known as phycobilins, which play a critical role in capturing light energy. In microalgae and cyanobacteria, energy absorbed by these phycobilins is efficiently transferred via fluorescence resonance energy transfer (FRET), to chlorophyll pigments for their use in photosynthetic reactions (Figure 1). Because phycobiliproteins have extremely high fluorescence quantum yields and absorbance coefficients over a wide spectral range, they serve as valuable fluorescent tags in a variety of fluorescence applications, primarily flow cytometry. Phycobiliproteins conjugated to molecules having biological specificity (e.g. immunoglobulin, protein A or streptavidin) are effective tools in fluorescence activated cell sorting (FACS), imaging, immunophenotyping and immunoassay applications. Compared to organic and synthetic fluorescent dyes, phycobiliproteins offer several advantages when used as fluorescent probes, including: • Intense long-wavelength excitation and emission profiles to minimize auto-fluorescence from biological materials • Minimal fluorescence quenching contributed by the covalent binding of phycobilins to the protein backbone • Highly water-soluble to facilitate chemical manipulation for conjugation reactions -
Two Classes of Pigments, Carotenoids and C-Phycocyanin, in Spirulina Powder and Their Antioxidant Activities
molecules Article Two Classes of Pigments, Carotenoids and C-Phycocyanin, in Spirulina Powder and Their Antioxidant Activities Woo Sung Park 1,†, Hye-Jin Kim 1,†, Min Li 2, Dong Hoon Lim 3, Jungmin Kim 4, Sang-Soo Kwak 5, Chang-Min Kang 4, Mario G. Ferruzzi 2,* and Mi-Jeong Ahn 1,* ID 1 College of Pharmacy and Research Institute of Pharmaceutical Sciences, Gyeongsang National University, Jinju 52828, Korea; [email protected] (W.S.P.); [email protected] (H.-J.K.) 2 Plants for Human Health Institute, North Carolina State University, Kannapolis, NC 28081, USA; [email protected] 3 Department of Information and Statistics and RINS, Gyeongsang National University, Jinju 52828, Korea; [email protected] 4 Korea Institute of Toxicology, Jinju 52834, Korea; [email protected] (J.K.); [email protected] (C.-M.K.) 5 Plant Systems Engineering Research Center, Korea Research Institute of Bioscience and Biotechnology, Daejeon 34141, Korea; [email protected] * Correspondence: [email protected] (M.G.F.); [email protected] (M.-J.A.); Tel.: +82-55-772-2425 (M.-J.A.) † Both first authors contributed equally to this work. Received: 24 July 2018; Accepted: 15 August 2018; Published: 17 August 2018 Abstract: Arthrospira platensis is the widely available source of spirulina that contains distinctive natural pigments, including carotenoids and C-phycocyanin (C-PC). In this study, the major carotenoid and C-PC contents were determined in seven commercially available spirulina powder products and laboratory-prepared A. platensis trichomes (AP-1) by an LC-DAD method and UV-Visible spectrometry, respectively. The correlation of these two pigment content levels with Hunter color coordinates and antioxidant activity was also evaluated. -
Phycocyanin-Specific Absorption Coefficient: Eliminating the Effect of Chlorophylls Absorption
CORE Metadata, citation and similar papers at core.ac.uk Provided by UNL | Libraries University of Nebraska - Lincoln DigitalCommons@University of Nebraska - Lincoln Papers in Natural Resources Natural Resources, School of 2015 Phycocyanin-specific ba sorption coefficient: Eliminating the effect of chlorophylls absorption Y. Z. Yacobi Kinneret Limnological Laboratory J. Köhler Leibniz Institut für Gewässerökologie und Binnenfischerei F. Leunert Leibniz Institut für Gewässerökologie und Binnenfischerei Anatoly A. Gitelson University of Nebraska - Lincoln, [email protected] Follow this and additional works at: http://digitalcommons.unl.edu/natrespapers Part of the Natural Resources and Conservation Commons, Natural Resources Management and Policy Commons, and the Other Environmental Sciences Commons Yacobi, Y. Z.; Köhler, J.; Leunert, F.; and Gitelson, Anatoly A., "Phycocyanin-specific bsa orption coefficient: Eliminating the effect of chlorophylls absorption" (2015). Papers in Natural Resources. 594. http://digitalcommons.unl.edu/natrespapers/594 This Article is brought to you for free and open access by the Natural Resources, School of at DigitalCommons@University of Nebraska - Lincoln. It has been accepted for inclusion in Papers in Natural Resources by an authorized administrator of DigitalCommons@University of Nebraska - Lincoln. LIMNOLOGY and Limnol. Oceanogr.: Methods 13, 2015, 157–168 OCEANOGRAPHY: METHODS VC 2015 Association for the Sciences of Limnology and Oceanography doi: 10.1002/lom3.10015 Phycocyanin-specific absorption -
Optimization of Extraction Method and Characterization of Phycocyanin Pigment from Spirulina Platensis
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by Journal of Mathematical and Fundamental Sciences 168 J. Math. Fund. Sci., Vol. 51, No. 2, 2019, 168-176 Optimization of Extraction Method and Characterization of Phycocyanin Pigment from Spirulina platensis Elin Julianti1, Susanti1, Marlia Singgih1 & Laida Neti Mulyani2 1School of Pharmacy, Institut Teknologi Bandung, Jalan Ganesha 10, Bandung 40132, Indonesia 2Department of Pharmacy, Faculty of Mathematics and Sciences, Sriwijaya University, Jl. Palembang-Indralaya KM 32, Ogan Ilir, South Sumatra, Indonesia E-mail: [email protected] Abstract. Spirulina platensis is a microalgae species that contains phycocyanin, a blue pigment that is widely used in the food, cosmetic and pharmaceutical industries. The objective of this study was to isolate phycocyanin from dried biomass of Spirulina platensis. The optimum extraction was through freeze- thawing extraction with 0.01 M phosphate buffer pH 7. Purification was done using 50% ammonium sulphate precipitation, dialysis, and gel filtration chromatography. The purity ratio of the purified product was 1.729 (A615/A280). Characterization of isolate, carried out using SDS-PAGE, gave molecular weights of around 15-16 Kda and using infrared spectrophotometry the similarity with the standard phycocyanin spectrum was obtained. Both methods confirmed that the isolate was phycocyanin. Keywords: freeze-thawing; microalgae; phycocyanin; purity ratio; SDS-PAGE; Spirulina platensis. 1 Introduction Spirulina platensis, which contains protein and vitamin, is widely used as a drug and food supplement in many countries [1]. It is also used as a natural dye for food and cosmetics [2]. The benefits come from pigment components contained within Spirulina, which are carotenoids, chlorophyll, and phycobiliprotein. -
Biomass and Phycocyanin from Oil and Natural Gas Extraction Produced Water Utilizing a Cyanobacteria Dominated Rotating Algal Biofilm Reactor (RABR)
Utah State University DigitalCommons@USU All Graduate Theses and Dissertations Graduate Studies 8-2018 Biomass and Phycocyanin from Oil and Natural Gas Extraction Produced Water Utilizing a Cyanobacteria Dominated Rotating Algal Biofilm Reactor (RABR) Jonathan L. Wood Utah State University Follow this and additional works at: https://digitalcommons.usu.edu/etd Part of the Biological Engineering Commons Recommended Citation Wood, Jonathan L., "Biomass and Phycocyanin from Oil and Natural Gas Extraction Produced Water Utilizing a Cyanobacteria Dominated Rotating Algal Biofilm Reactor (RABR)" (2018). All Graduate Theses and Dissertations. 7073. https://digitalcommons.usu.edu/etd/7073 This Thesis is brought to you for free and open access by the Graduate Studies at DigitalCommons@USU. It has been accepted for inclusion in All Graduate Theses and Dissertations by an authorized administrator of DigitalCommons@USU. For more information, please contact [email protected]. BIOMASS AND PHYCOCYANIN FROM OIL AND NATURAL GAS EXTRACTION PRODUCED WATER UTILIZING A CYANOBACTERIA DOMINATED ROTATING ALGAL BIOFILM REACTOR (RABR) by Jonathan L. Wood A thesis submitted in partial fulfillment of the requirements for the degree of MASTER OF SCIENCE in Biological Engineering Approved: ______________________ ____________________ Ronald. C. Sims, Ph.D. Jon Takemoto, Ph.D. Major Professor Committee Member ______________________ ____________________ Charles D. Miller, Ph.D. Mark R. McLellan, Ph.D. Committee Member Vice President for Research and Dean of the School of Graduate Studies UTAH STATE UNIVERSITY Logan, Utah 2018 ii Copyright © Jonathan L. Wood 2018 All Rights Reserved iii ABSTRACT Biomass and phycocyanin from oil and natural gas extraction produced water utilizing a cyanobacteria dominated rotating algal biofilm reactor (RABR) by Jonathan L. -
Molecular Interaction of Protein-Pigment C-Phycocyanin with Bovine Serum Albumin in a Gomphosis Structure Inhibiting Amyloid Formation
International Journal of Molecular Sciences Article Molecular Interaction of Protein-Pigment C-Phycocyanin with Bovine Serum Albumin in a Gomphosis Structure Inhibiting Amyloid Formation Yi-Cong Luo and Pu Jing * Shanghai Food Safety and Engineering Technology Research Center, Bor S. Luh Food Safety Research Center, Key Lab of Urban Agriculture (South), School of Agriculture & Biology, Shanghai Jiao Tong University, Shanghai 200240, China; [email protected] * Correspondence: [email protected] Received: 29 August 2020; Accepted: 20 October 2020; Published: 2 November 2020 Abstract: Accumulation of amyloid fibrils in organisms accompanies many diseases. Natural extracts offer an alternative strategy to control the process with potentially fewer side effects. In this study, the inhibition of C-phycocyanin from Spirulina sp. on amyloid formation of bovine serum albumin (BSA) during a 21-day incubation was investigated using fluorescence and circular dichroism (CD), and mechanisms were explored via kinetic fitting and molecular docking. C-phycocyanin (0–50 µg/mL) hindered the amyloid formation process of BSA with increased half-lives (12.43–17.73 days) based on fluorescence intensity. A kinetic model was built and showed that the k1 decreased from 1.820 10 2 d 1 to 2.62 10 3 d 1 with the increase of C-phycocyanin, while k showed no changes, × − − × − − 2 indicating that the inhibition of BSA fibrillation by C-phycocyanin occurred in a spontaneous process instead of self-catalyzed one. CD results show that C-phycocyanin inhibited conformational conversion (α-helices and β-sheets) of BSA from day 6 to day 18. Molecular docking suggested that C-phycocyanin may hinder BSA fibrillation by hydrogen-bonding > 6 of 27 α-helices of BSA in a gomphosis-like structure, but the unblocked BSA α-helices might follow the self-catalytic process subsequently. -
Phycobiliproteins: R-PE, B-PE, CPC, APC
FT-28310A Phycobiliproteins: R-PE, B-PE, CPC, APC Product Information Product name MW exc\em. max. mol. abs. cat.number (g·mol-1) (nm) (M-1cm-1) R-PhycoErythrin (R-PE) 240 000 498.546.566nm EC: 1.53x106 1mg/ml solution / 576nm FP-28310A, 1mg QY: 0.84 FP-28310B, 5mg Supplied in 100 mM K Phosphate buffer, pH7.0 with 60% saturated (NH4)2SO4, 1 mM EDTA and 1 mM Sodium Azide. FP-326011, 5mg Supplied Lyophilized B-PhycoErythrin (B-PE) 240 000 546.566nm EC(545nm) : 2.4x106 FP-17885A, 1mg / 576nm EC(563nm) 6 FP-17885B, 5mg QY: 0.98 :2.33x10 C-PhycoCyanine (C-PC) 232 000 620nm/642nm EC: 1.54x106 FP-35191A, 1mg QY: 0.81 FP-35191B, 5mg P.1 FT-28310A Product name MW exc\em. max. mol. abs. cat.number (g·mol-1) (nm) (M-1cm-1) AlloPhycoCyanine, 105 000 651nm/662nm EC: 7.3x105 cross-linked (cl-APC) QY : 0.68 FP-35298A, 1 mg Supplied in saturated (NH4)2SO4 soln see page 2 for spectra and other APCs AlloPhycoCyanine, 105 000 651nm/662nm EC: 7.3 105 not stabilized (APC) QY : 0.68 FP-CD759A, 5 mg Supplied in saturated (NH4)2SO4 soln. AlloPhycoCyanine, cross-linked (cl-APC) FP-35298A, 1 mg FP-35298B, 5 mg Supplied in saturated (NH4)2SO4 soln. FP-855251, 5mg Lyophilized AlloPhycoCyanine, SMCC activated FP-CD7550, 2 mg Storage: +4°C (in the dark, avoid moisture, DO NOT FREEZE) (H) Technical and scientific information Applications As a result from their efficient features, phycobiliproteins allow higher detection sensitivity, and can be used in various fluorescence based techniques (Fluorimetry in microplate, Flow Cytometry, FISH, two or multicolor detections…).