Introduction to the Transition State Theory 29
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Rate Constants and Kinetic Isotope Effects for Methoxy Radical Reacting with NO2 and O2 Jiajue Chai, Hongyi Hu, Theodore
Rate Constants and Kinetic Isotope Effects for Methoxy Radical Reacting with NO2 and O2 Jiajue Chai, Hongyi Hu, Theodore. S. Dibble* Department of Chemistry, College of Environmental Science and Forestry, State University of New York, Syracuse, New York 13210, United States Geoffrey. S. Tyndall,* and John. J. Orlando Atmospheric Chemistry Division, National Center for Atmospheric Research, Boulder, Colorado 80307, United States Abstract Relative rate studies were carried out to determine the temperature dependent rate constant ratio k1/k2a: CH3O• + O2 → HCHO + HO2• (R1) CH3O• + NO2 (+M) → CH3ONO2 (+ M) (R2a) over the temperature range 250-333 K in an environmental chamber at 700 Torr using FTIR detection. Absolute rate constants k2 were determined using laser flash photolysis/laser induced fluorescence under the same conditions. The analogous experiments were carried out for the reactions of perdeuterated methoxy radical (CD3O•). Absolute rate constants k2 were in excellent agreement with the recommendations of the JPL Data Evaluation panel. The combined data (i.e., 3 -1 k1/k2 and k2) allow determination of k1 as cm s , corresponding to 1.4 × 10-15 cm3 s-1 at 298 K. The rate constant at 298 K is in excellent agreement with previous work, but the observed temperature dependence is less than previously reported. The deuterium isotope effect, kH/kD, can be expressed in Arrhenius form as The deuterium isotope effect does not appear to be greatly influenced by tunneling, which is consistent with previous theoretical work by Hu and Dibble (Hu, H.; Dibble, T. S., J. Phys. Chem. A 2013, 117, 14230–14242). Keywords: methylnitrite, formaldehyde, methylnitrate, alkoxy radicals, kinetic isotope effect * [email protected], [email protected] 1 I. -
Chapter 9. Atomic Transport Properties
NEA/NSC/R(2015)5 Chapter 9. Atomic transport properties M. Freyss CEA, DEN, DEC, Centre de Cadarache, France Abstract As presented in the first chapter of this book, atomic transport properties govern a large panel of nuclear fuel properties, from its microstructure after fabrication to its behaviour under irradiation: grain growth, oxidation, fission product release, gas bubble nucleation. The modelling of the atomic transport properties is therefore the key to understanding and predicting the material behaviour under irradiation or in storage conditions. In particular, it is noteworthy that many modelling techniques within the so-called multi-scale modelling scheme of materials make use of atomic transport data as input parameters: activation energies of diffusion, diffusion coefficients, diffusion mechanisms, all of which are then required to be known accurately. Modelling approaches that are readily used or which could be used to determine atomic transport properties of nuclear materials are reviewed here. They comprise, on the one hand, static atomistic calculations, in which the migration mechanism is fixed and the corresponding migration energy barrier is calculated, and, on the other hand, molecular dynamics calculations and kinetic Monte-Carlo simulations, for which the time evolution of the system is explicitly calculated. Introduction In nuclear materials, atomic transport properties can be a combination of radiation effects (atom collisions) and thermal effects (lattice vibrations), this latter being possibly enhanced by vacancies created by radiation damage in the crystal lattice (radiation enhanced-diffusion). Thermal diffusion usually occurs at high temperature (typically above 1 000 K in nuclear ceramics), which makes the transport processes difficult to model at lower temperatures because of the low probability to see the diffusion event occur in a reasonable simulation time. -
Download Author Version (PDF)
Chemical Society Reviews Understanding Catalysis Journal: Chemical Society Reviews Manuscript ID: CS-TRV-06-2014-000210.R2 Article Type: Tutorial Review Date Submitted by the Author: 20-Jun-2014 Complete List of Authors: Roduner, Emil; Universitat Stuttgart, Institut fur Physikalische Chemie Page 1 of 33 Chemical Society Reviews Tutorial Review Understanding Catalysis Emil Roduner Institute of Physical Chemistry, University of Stuttgart, D-70569 Stuttgart, Germany and Chemistry Department, University of Pretoria, Pretoria 0002, Republic of South Africa Abstract The large majority of chemical compounds underwent at least one catalytic step during synthesis. While it is common knowledge that catalysts enhance reaction rates by lowering the activation energy it is often obscure how catalysts achieve this. This tutorial review explains some fundamental principles of catalysis and how the mechanisms are studied. The dissociation of formic acid into H 2 and CO 2, serves to demonstrate how a water molecule can open a new reaction path at lower energy, how immersion in liquid water can influence the charge distribution and energetics, and how catalysis at metal surfaces differs from that in the gas phase. The reversibility of catalytic reactions, the influence of an adsorption pre- equilibrium and the compensating effects of adsorption entropy and enthalpy on the Arrhenius parameters are discussed. It is shown that flexibility around the catalytic centre and residual substrate dynamics on the surface affect these parameters. Sabatier’s principle of optimum substrate adsorption, shape selectivity in the pores of molecular sieves and the polarisation effect at the metal-support interface are explained. Finally, it is shown that the application of a bias voltage in electrochemistry offers an additional parameter to promote or inhibit a reaction. -
Transition State Theory. I
MIT OpenCourseWare http://ocw.mit.edu 5.62 Physical Chemistry II Spring 2008 For information about citing these materials or our Terms of Use, visit: http://ocw.mit.edu/terms. 5.62 Spring 2007 Lecture #33 Page 1 Transition State Theory. I. Transition State Theory = Activated Complex Theory = Absolute Rate Theory ‡ k H2 + F "! [H2F] !!" HF + H Assume equilibrium between reactants H2 + F and the transition state. [H F]‡ K‡ = 2 [H2 ][F] Treat the transition state as a molecule with structure that decays unimolecularly with rate constant k. d[HF] ‡ ‡ = k[H2F] = kK [H2 ][F] dt k has units of sec–1 (unimolecular decay). The motion along the reaction coordinate looks ‡ like an antisymmetric vibration of H2F , one-half cycle of this vibration. Therefore k can be approximated by the frequency of the antisymmetric vibration ν[sec–1] k ≈ ν ≡ frequency of antisymmetric vibration (bond formation and cleavage looks like antisymmetric vibration) d[HF] = νK‡ [H2] [F] dt ! ‡* $ d[HF] (q / N) 'E‡ /kT [ ] = ν # *H F &e [H2 ] F dt "#(q 2 N)(q / N)%& ! ‡ $ ‡ ‡* ‡ (q / N) ' q *' q *' g * ‡ K‡ = # trans &) rot ,) vib ,) 0 ,e-E kT H2 qH2 ) q*H2 , gH2 gF "# (qtrans N) %&( rot +( vib +( 0 0 + ‡ Reaction coordinate is antisymmetric vibrational mode of H2F . This vibration is fully excited (high T limit) because it leads to the cleavage of the H–H bond and the formation of the H–F bond. For a fully excited vibration hν kT The vibrational partition function for the antisymmetric mode is revised 4/24/08 3:50 PM 5.62 Spring 2007 Lecture #33 Page 2 1 kT q*asym = ' since e–hν/kT ≈ 1 – hν/kT vib 1! e!h" kT h! Note that this is an incredibly important simplification. -
Eyring Equation
Search Buy/Sell Used Reactors Glass microreactors Hydrogenation Reactor Buy Or Sell Used Reactors Here. Save Time Microreactors made of glass and lab High performance reactor technology Safe And Money Through IPPE! systems for chemical synthesis scale-up. Worldwide supply www.IPPE.com www.mikroglas.com www.biazzi.com Reactors & Calorimeters Induction Heating Reacting Flow Simulation Steam Calculator For Process R&D Laboratories Check Out Induction Heating Software & Mechanisms for Excel steam table add-in for water Automated & Manual Solutions From A Trusted Source. Chemical, Combustion & Materials and steam properties www.helgroup.com myewoss.biz Processes www.chemgoodies.com www.reactiondesign.com Eyring Equation Peter Keusch, University of Regensburg German version "If the Lord Almighty had consulted me before embarking upon the Creation, I should have recommended something simpler." Alphonso X, the Wise of Spain (1223-1284) "Everything should be made as simple as possible, but not simpler." Albert Einstein Both the Arrhenius and the Eyring equation describe the temperature dependence of reaction rate. Strictly speaking, the Arrhenius equation can be applied only to the kinetics of gas reactions. The Eyring equation is also used in the study of solution reactions and mixed phase reactions - all places where the simple collision model is not very helpful. The Arrhenius equation is founded on the empirical observation that rates of reactions increase with temperature. The Eyring equation is a theoretical construct, based on transition state model. The bimolecular reaction is considered by 'transition state theory'. According to the transition state model, the reactants are getting over into an unsteady intermediate state on the reaction pathway. -
The 'Yard Stick' to Interpret the Entropy of Activation in Chemical Kinetics
World Journal of Chemical Education, 2018, Vol. 6, No. 1, 78-81 Available online at http://pubs.sciepub.com/wjce/6/1/12 ©Science and Education Publishing DOI:10.12691/wjce-6-1-12 The ‘Yard Stick’ to Interpret the Entropy of Activation in Chemical Kinetics: A Physical-Organic Chemistry Exercise R. Sanjeev1, D. A. Padmavathi2, V. Jagannadham2,* 1Department of Chemistry, Geethanjali College of Engineering and Technology, Cheeryal-501301, Telangana, India 2Department of Chemistry, Osmania University, Hyderabad-500007, India *Corresponding author: [email protected] Abstract No physical or physical-organic chemistry laboratory goes without a single instrument. To measure conductance we use conductometer, pH meter for measuring pH, colorimeter for absorbance, viscometer for viscosity, potentiometer for emf, polarimeter for angle of rotation, and several other instruments for different physical properties. But when it comes to the turn of thermodynamic or activation parameters, we don’t have any meters. The only way to evaluate all the thermodynamic or activation parameters is the use of some empirical equations available in many physical chemistry text books. Most often it is very easy to interpret the enthalpy change and free energy change in thermodynamics and the corresponding activation parameters in chemical kinetics. When it comes to interpretation of change of entropy or change of entropy of activation, more often it frightens than enlightens a new teacher while teaching and the students while learning. The classical thermodynamic entropy change is well explained by Atkins [1] in terms of a sneeze in a busy street generates less additional disorder than the same sneeze in a quiet library (Figure 1) [2]. -
Tables of Rate Constants for Gas Phase Chemical Reactions of Sulfur Compounds (1971-1979)
NBSIR 80-2118 Tables of Rate Constants for Gas Phase Chemical Reactions of Sulfur Compounds (1971-1979) Francis Westley Chemical Kinetics Division Center for Thermodynamics and Molecular Science National Measurement Laboratory National Bureau of Standards U.S. Department of Commerce Washington. D.C. 20234 July 1980 Interim Report Prepared for Morgantown Energy Technology Center Department of Energy Morgantown, West Virginia 26505 Fice of Standard Reference Data itional Bureau of Standards ashington, D.C. 20234 c, 2 Jl 1 m * rational bureau 07 STANDARDS LIBRARY NBSIR 80-2118 wov 2 4 1980 TABLES OF RATE CONSTANTS FOR GAS f)Oi Clcc -Ore PHASE CHEMICAL REACTIONS OF SULFUR COMPOUNDS (1971-1979) 1 5 (o lo-z im Francis Westley Chemical Kinetics Division Center for Thermodynamics and Molecular Science National Measurement Laboratory National Bureau of Standards U.S. Department of Commerce Washington, D.C. 20234 July 1980 Interim Report Prepared for Morgantown Energy Technology Center Department of Energy Morgantown, West Virginia 26505 and Office of Standard Reference Data National Bureau of Standards Washington, D.C. 20234 U.S. DEPARTMENT OF COMMERCE, Philip M. Klutznick, Secretary Luther H. Hodges, Jr., Deputy Secretary Jordan J. Baruch, Assistant Secretary for Productivity, Technology, and Innovation NATIONAL BUREAU OF STANDARDS. Ernest Ambler, Director . i:i : a 1* V'.OTf in. te- ?') t aa.‘ .1 J Table of Contents Abstract 1 Introduction 2 Guidelines for the User 4 Table of Arrhenius Parameters for Chemical Reactions of Sulfur Compounds 12 Reactions of: S(Sulfur atom) 12 $2(Sulfur dimer) 20 S0(Sulfur monoxide) 21 S02(Sulfur dioxide 23 S0 (Sulfur trioxide) 28 3 S20(Sul fur oxide^O) ) 29 SH (Mercapto free radical) 29 H2S (Hydroqen sulfide 31 CS (Carbon monosulfide free radical) 32 CS2 (Carbon disulfide) 33 COS (Carbon oxide sulfide) 35 CH^S* ( Methyl thio free radical) 36 CH^SH (Methanethiol ) 36 cy-CF^CF^S (Thiirane) 37 CH^SCF^* (Methyl, (methyl thio)-, free radical) ... -
Classical and Modern Methods in Reaction Rate Theory
J. Phys. Chem. 1988, 92, 3711-3725 3711 loss associated with the transition between states is offset by a For the Re( MQ+)-based complexes an additional complication gain in energy in the intramolecular vibrations (eq 3). to intramolecular electron transfer exists arising from a "flattening" On the other hand, if (AGe,,2 + A0,2) > (AG,,l + A,,,) (Figure of the relative orientations of the two rings of the MQ+ ligand 4B) and nuclear tunneling effects in the librational modes are when it accepts an However, the analysis presented unimportant, intramolecular electron transfer can not occur in here does provide a general explanation for the role of free energy a frozen environment. The situation is the same as in Figure 3A. change in environments where dipole motions are restricted. For Even direct Re(1) - MQ' excitation (process a in Figure 4B) a directed, intramolecular electron transfer such as reaction 1, must either lead to the ground state by emission or to the Re- the change in electronic distribution between states will, in general, (11)-bpy'--based MLCT state by reverse electron transfer: lead to a difference between Ao,l and A0,2. This difference creates a solvent dipole barrier to intramolecular electron transfer. It [ (bpy)Re"(CO) 3( MQ')] 2+* -+ (bpy'-)Re"( CO) 3(MQ')] 2'* follows from eq 4 that if light-induced electron transfer is to occur (5) in a frozen environment, the difference in solvent reorganizational The inversion in the sense of the electron transfer in the frozen energy, A& = bS2- A,,, must be compensated for by a favorable environment is induced energetically by the greater solvent re- free energy change, A(AG) = - AGes,l,as organizational energy for the lower excited state, A0,2 > Ao,l - Aces,~- AGes.2 > Ao-2 - &,I (AGes,2 - AGes,l)* or In a macroscopic sample, a distribution of solvent dipole en- vironments exists around the assembly of ground states. -
Glossary of Terms Used in Photochemistry, 3Rd Edition (IUPAC
Pure Appl. Chem., Vol. 79, No. 3, pp. 293–465, 2007. doi:10.1351/pac200779030293 © 2007 IUPAC INTERNATIONAL UNION OF PURE AND APPLIED CHEMISTRY ORGANIC AND BIOMOLECULAR CHEMISTRY DIVISION* SUBCOMMITTEE ON PHOTOCHEMISTRY GLOSSARY OF TERMS USED IN PHOTOCHEMISTRY 3rd EDITION (IUPAC Recommendations 2006) Prepared for publication by S. E. BRASLAVSKY‡ Max-Planck-Institut für Bioanorganische Chemie, Postfach 10 13 65, 45413 Mülheim an der Ruhr, Germany *Membership of the Organic and Biomolecular Chemistry Division Committee during the preparation of this re- port (2003–2006) was as follows: President: T. T. Tidwell (1998–2003), M. Isobe (2002–2005); Vice President: D. StC. Black (1996–2003), V. T. Ivanov (1996–2005); Secretary: G. M. Blackburn (2002–2005); Past President: T. Norin (1996–2003), T. T. Tidwell (1998–2005) (initial date indicates first time elected as Division member). The list of the other Division members can be found in <http://www.iupac.org/divisions/III/members.html>. Membership of the Subcommittee on Photochemistry (2003–2005) was as follows: S. E. Braslavsky (Germany, Chairperson), A. U. Acuña (Spain), T. D. Z. Atvars (Brazil), C. Bohne (Canada), R. Bonneau (France), A. M. Braun (Germany), A. Chibisov (Russia), K. Ghiggino (Australia), A. Kutateladze (USA), H. Lemmetyinen (Finland), M. Litter (Argentina), H. Miyasaka (Japan), M. Olivucci (Italy), D. Phillips (UK), R. O. Rahn (USA), E. San Román (Argentina), N. Serpone (Canada), M. Terazima (Japan). Contributors to the 3rd edition were: A. U. Acuña, W. Adam, F. Amat, D. Armesto, T. D. Z. Atvars, A. Bard, E. Bill, L. O. Björn, C. Bohne, J. Bolton, R. Bonneau, H. -
Spring 2013 Lecture 13-14
CHM333 LECTURE 13 – 14: 2/13 – 15/13 SPRING 2013 Professor Christine Hrycyna INTRODUCTION TO ENZYMES • Enzymes are usually proteins (some RNA) • In general, names end with suffix “ase” • Enzymes are catalysts – increase the rate of a reaction – not consumed by the reaction – act repeatedly to increase the rate of reactions – Enzymes are often very “specific” – promote only 1 particular reaction – Reactants also called “substrates” of enzyme catalyst rate enhancement non-enzymatic (Pd) 102-104 fold enzymatic up to 1020 fold • How much is 1020 fold? catalyst time for reaction yes 1 second no 3 x 1012 years • 3 x 1012 years is 500 times the age of the earth! Carbonic Anhydrase Tissues ! + CO2 +H2O HCO3− +H "Lungs and Kidney 107 rate enhancement Facilitates the transfer of carbon dioxide from tissues to blood and from blood to alveolar air Many enzyme names end in –ase 89 CHM333 LECTURE 13 – 14: 2/13 – 15/13 SPRING 2013 Professor Christine Hrycyna Why Enzymes? • Accelerate and control the rates of vitally important biochemical reactions • Greater reaction specificity • Milder reaction conditions • Capacity for regulation • Enzymes are the agents of metabolic function. • Metabolites have many potential pathways • Enzymes make the desired one most favorable • Enzymes are necessary for life to exist – otherwise reactions would occur too slowly for a metabolizing organis • Enzymes DO NOT change the equilibrium constant of a reaction (accelerates the rates of the forward and reverse reactions equally) • Enzymes DO NOT alter the standard free energy change, (ΔG°) of a reaction 1. ΔG° = amount of energy consumed or liberated in the reaction 2. -
Interconversion of Hydrated Protons at the Interface Between Liquid Water and Platinum
Electronic Supplementary Material (ESI) for Physical Chemistry Chemical Physics. This journal is © the Owner Societies 2019 Supporting Information: Interconversion of Hydrated Protons at the Interface between Liquid Water and Platinum Peter S. Rice, Yu Mao, Chenxi Guo and P. Hu* School of Chemistry and Chemical Engineering, The Queen’s University of Belfast, Belfast BT9 5AG, N. Ireland Email: [email protected] Contents Page S1. Ab Initio Molecular Dynamics (AIMD) based Umbrella Sampling (US) ................. 14 S2. Unit Cell Conversion ................................................................................................ 17 S3. Atomic Density Profile ............................................................................................. 17 S4. Radial Pair Distribution Function, (g(r)) ................................................................. 18 S5. Coordination Number (CN) ..................................................................................... 18 S6. Charge Density Difference ....................................................................................... 19 S7. Self-Diffusion Coefficient (D0) .................................................................................. 21 S8. Dipole Orientation Analysis ..................................................................................... 22 13 S1. Ab Initio Molecular Dynamics (AIMD) based Umbrella Sampling (US) x To study the interchange of species at the Pt(111)/H2n+1On interface, MD simulations based on umbrella sampling were used to investigate -
Eyring Activation Energy Analysis of Acetic Anhydride Hydrolysis in Acetonitrile Cosolvent Systems Nathan Mitchell East Tennessee State University
East Tennessee State University Digital Commons @ East Tennessee State University Electronic Theses and Dissertations Student Works 5-2018 Eyring Activation Energy Analysis of Acetic Anhydride Hydrolysis in Acetonitrile Cosolvent Systems Nathan Mitchell East Tennessee State University Follow this and additional works at: https://dc.etsu.edu/etd Part of the Analytical Chemistry Commons Recommended Citation Mitchell, Nathan, "Eyring Activation Energy Analysis of Acetic Anhydride Hydrolysis in Acetonitrile Cosolvent Systems" (2018). Electronic Theses and Dissertations. Paper 3430. https://dc.etsu.edu/etd/3430 This Thesis - Open Access is brought to you for free and open access by the Student Works at Digital Commons @ East Tennessee State University. It has been accepted for inclusion in Electronic Theses and Dissertations by an authorized administrator of Digital Commons @ East Tennessee State University. For more information, please contact [email protected]. Eyring Activation Energy Analysis of Acetic Anhydride Hydrolysis in Acetonitrile Cosolvent Systems ________________________ A thesis presented to the faculty of the Department of Chemistry East Tennessee State University In partial fulfillment of the requirements for the degree Master of Science in Chemistry ______________________ by Nathan Mitchell May 2018 _____________________ Dr. Dane Scott, Chair Dr. Greg Bishop Dr. Marina Roginskaya Keywords: Thermodynamic Analysis, Hydrolysis, Linear Solvent Energy Relationships, Cosolvent Systems, Acetonitrile ABSTRACT Eyring Activation Energy Analysis of Acetic Anhydride Hydrolysis in Acetonitrile Cosolvent Systems by Nathan Mitchell Acetic anhydride hydrolysis in water is considered a standard reaction for investigating activation energy parameters using cosolvents. Hydrolysis in water/acetonitrile cosolvent is monitored by measuring pH vs. time at temperatures from 15.0 to 40.0 °C and mole fraction of water from 1 to 0.750.