Nitrogen and Tropical Agriculture
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Host-Secreted Antimicrobial Peptide Enforces Symbiotic Selectivity in Medicago Truncatula
Host-secreted antimicrobial peptide enforces symbiotic selectivity in Medicago truncatula Qi Wanga, Shengming Yanga, Jinge Liua, Kata Terecskeib, Edit Ábrahámb, Anikó Gombárc, Ágota Domonkosc, Attila Szucs} b, Péter Körmöczib, Ting Wangb, Lili Fodorc, Linyong Maod,e, Zhangjun Feid,e, Éva Kondorosib,1, Péter Kalóc, Attila Keresztb, and Hongyan Zhua,1 aDepartment of Plant and Soil Sciences, University of Kentucky, Lexington, KY 40546; bInstitute of Biochemistry, Biological Research Center, Szeged 6726, Hungary; cNational Agricultural Research and Innovation Centre, Agricultural Biotechnology Institute, Gödöllo} 2100, Hungary; dBoyce Thompson Institute for Plant Research, Cornell University, Ithaca, NY 14853; and eU.S. Department of Agriculture–Agricultural Research Service Robert W. Holley Center for Agriculture and Health, Cornell University, Ithaca, NY 14853 Contributed by Éva Kondorosi, February 14, 2017 (sent for review January 17, 2017; reviewed by Rebecca Dickstein and Julia Frugoli) Legumes engage in root nodule symbioses with nitrogen-fixing effectors or microbe-associated molecular patterns (MAMPs) soil bacteria known as rhizobia. In nodule cells, bacteria are enclosed such as surface polysaccharides to facilitate their invasion of the in membrane-bound vesicles called symbiosomes and differentiate host (7, 8). Therefore, effector- or MAMP-triggered plant im- into bacteroids that are capable of converting atmospheric nitrogen munity mediated by intracellular nucleotide binding/leucine-rich into ammonia. Bacteroid differentiation -
The Conditions for Sustainability of Tropical Agriculture. Bioeconomic Models Applied to Five Contrasting Farming Systems
The conditions for sustainability of tropical agriculture. Bioeconomic models applied to five contrasting farming systems. Paper presented for the mini-symposium on modeling at the International Association of Agricultural Economists conference In Berlin August 2000. Bruno Barbier1 and Chantal Carpentier2 Abstract Bioeconomic models (BEMs) are models that simulate biophysical processes and economic activities based on optimization algorithms. This paper describes five applications of BEMs in five contrasted tropical farming systems from Africa and Latin America. The objective of this study is to understand the land use dynamic, assess the strengths and limitations of each agro-ecosystem, and predict the response farmers are likely to give to various external changes such as prices and population growth. Since these models are reasonable approximation of what is likely to happen in the future, we made recommendations about the possibilities of boosting production, alleviating poverty and maintaining the environment. The simulations show contrasting results for each site. The main factor of differentiation between each site is rainfall with the more challenging area being the Sahel. However the more humid area is not the better area. The seemingly better area is the hillside area of Honduras because springs and good access to a large city made intensification a reality. The problems are of different nature in each site. The African villages have the greatest challenges since population growth requires intensification and that intensification under warm climate is more expensive than under colder climate. Indeed the central problem of most African soils is its low natural fertility and then the high oxidation rates which makes permanent cultivation difficult. -
Lactic Acid Bacteria
Sustainable Agriculture August 2013 SA-8 Natural Farming: Lactic Acid Bacteria David M. Ikeda1, Eric Weinert, Jr.1, Kim C.S. Chang1, Joseph M. McGinn1, Sherri A. Miller1 Cheyanne Keliihoomalu2, and Michael W. DuPonte2 1Cho Global Natural Farming Hawai‘i, Hilo, HI 2College of Tropical Agriculture and Human Resources, Cooperative Extension Service, Hilo, HI Introduction for the production of yogurt, cheese, cultured butter, Lactic acid bacteria (LAB) are ubiquitous microorgan- sour cream, sausage, kimchee, olives, and sauerkraut isms that can be beneficial in crop and livestock produc- (Nordqvist 2004). tion. With their long history of use in food preservation by many world cultures (Nordqvist 2004), LAB are How Are LAB Cultured? generally recognized as safe for human consumption. By Step-by-step instructions are given below. Rice grains producing lactic acid as a fermentation metabolite, these are readily available, economical sources of LAB. microorganisms prolong storage, preserve nutritive value, When washing rice with clean water in preparation for and enhance flavors of otherwise perishable foods. LAB cooking, colonies of LAB can be collected in the rinse are easy to collect and economical to culture, store, and water. Microorganisms other than LAB are also pres- use. This fact sheet addresses frequently asked questions ent, but allowing the rice rinse water to sit for 3 to 5 concerning LAB collection, culture, storage, and use in days will cause LAB to become the predominant spe- Natural Farming. cies. Since the rinse water is low in nutrients, milk is then added as a food source for the LAB. Fresh cow’s What Are Lactic Acid Bacteria? or goat’s milk, which is high in lactose (milk sugar), “Lactic acid bacteria” (LAB) refers to a large group is an ideal food source for LAB proliferation, or cul- of bacteria, rather than a single species or strain, that ture. -
Agriculture, Forestry, and Other Human Activities
4 Agriculture, Forestry, and Other Human Activities CO-CHAIRS D. Kupfer (Germany, Fed. Rep.) R. Karimanzira (Zimbabwe) CONTENTS AGRICULTURE, FORESTRY, AND OTHER HUMAN ACTIVITIES EXECUTIVE SUMMARY 77 4.1 INTRODUCTION 85 4.2 FOREST RESPONSE STRATEGIES 87 4.2.1 Special Issues on Boreal Forests 90 4.2.1.1 Introduction 90 4.2.1.2 Carbon Sinks of the Boreal Region 90 4.2.1.3 Consequences of Climate Change on Emissions 90 4.2.1.4 Possibilities to Refix Carbon Dioxide: A Case Study 91 4.2.1.5 Measures and Policy Options 91 4.2.1.5.1 Forest Protection 92 4.2.1.5.2 Forest Management 92 4.2.1.5.3 End Uses and Biomass Conversion 92 4.2.2 Special Issues on Temperate Forests 92 4.2.2.1 Greenhouse Gas Emissions from Temperate Forests 92 4.2.2.2 Global Warming: Impacts and Effects on Temperate Forests 93 4.2.2.3 Costs of Forestry Countermeasures 93 4.2.2.4 Constraints on Forestry Measures 94 4.2.3 Special Issues on Tropical Forests 94 4.2.3.1 Introduction to Tropical Deforestation and Climatic Concerns 94 4.2.3.2 Forest Carbon Pools and Forest Cover Statistics 94 4.2.3.3 Estimates of Current Rates of Forest Loss 94 4.2.3.4 Patterns and Causes of Deforestation 95 4.2.3.5 Estimates of Current Emissions from Forest Land Clearing 97 4.2.3.6 Estimates of Future Forest Loss and Emissions 98 4.2.3.7 Strategies to Reduce Emissions: Types of Response Options 99 4.2.3.8 Policy Options 103 75 76 IPCC RESPONSE STRATEGIES WORKING GROUP REPORTS 4.3 AGRICULTURE RESPONSE STRATEGIES 105 4.3.1 Summary of Agricultural Emissions of Greenhouse Gases 105 4.3.2 Measures and -
Human Alteration of the Global Nitrogen Cycle
What is Nitrogen? Human Alteration of the Nitrogen is the most abundant element in Global Nitrogen Cycle the Earth’s atmosphere. Nitrogen makes up 78% of the troposphere. Nitrogen cannot be absorbed directly by the plants and animals until it is converted into compounds they can use. This process is called the Nitrogen Cycle. Heather McGraw, Mandy Williams, Suzanne Heinzel, and Cristen Whorl, Give SIUE Permission to Put Our Presentation on E-reserve at Lovejoy Library. The Nitrogen Cycle How does the nitrogen cycle work? Step 1- Nitrogen Fixation- Special bacteria convert the nitrogen gas (N2 ) to ammonia (NH3) which the plants can use. Step 2- Nitrification- Nitrification is the process which converts the ammonia into nitrite ions which the plants can take in as nutrients. Step 3- Ammonification- After all of the living organisms have used the nitrogen, decomposer bacteria convert the nitrogen-rich waste compounds into simpler ones. Step 4- Denitrification- Denitrification is the final step in which other bacteria convert the simple nitrogen compounds back into nitrogen gas (N2 ), which is then released back into the atmosphere to begin the cycle again. How does human intervention affect the nitrogen cycle? Nitric Oxide (NO) is released into the atmosphere when any type of fuel is burned. This includes byproducts of internal combustion engines. Production and Use of Nitrous Oxide (N2O) is released into the atmosphere through Nitrogen Fertilizers bacteria in livestock waste and commercial fertilizers applied to the soil. Removing nitrogen from the Earth’s crust and soil when we mine nitrogen-rich mineral deposits. Discharge of municipal sewage adds nitrogen compounds to aquatic ecosystems which disrupts the ecosystem and kills fish. -
Global Distribution Patterns of Marine Nitrogen-Fixers by Imaging and Molecular Methods Running Title: Diazotrophs in Tara Oceans
bioRxiv preprint doi: https://doi.org/10.1101/2020.10.17.343731; this version posted April 1, 2021. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY 4.0 International license. Global distribution patterns of marine nitrogen-fixers by imaging and molecular methods Running title: Diazotrophs in Tara Oceans Juan José Pierella Karlusich1,2, Eric Pelletier2,3,, Fabien Lombard2,5,8 , Madeline Carsique1, Etienne Dvorak1, Sébastien Colin4,6,10, Marc Picheral2,5, Francisco M. Cornejo-Castillo4, Silvia G. Acinas7, Rainer Pepperkok2,6, Eric Karsenti1,2,6, Colomban de Vargas2,4, Patrick Wincker2,3, Chris Bowler1,2*, Rachel A Foster 9* 1 Institut de Biologie de l'ENS (IBENS), Département de biologie, École normale supérieure, CNRS, INSERM, Université PSL, 75005 Paris, France 2 CNRS Research Federation for the study of Global Ocean Systems Ecology and Evolution, FR2022/Tara Oceans GOSEE, 3 rue Michel-Ange, 75016 Paris, France 3 Génomique Métabolique, Genoscope, Institut François Jacob, CEA, CNRS, Univ Evry, Université Paris-Saclay, 91057 Evry, France 4 Sorbonne Université, CNRS, Station Biologique de Roscoff, UMR 7144, ECOMAP, 29680 Roscoff, France 5 Sorbonne Universités, CNRS, Laboratoire d'Océanographie de Villefranche (LOV), 06230 Villefranche-sur-Mer, France 6 European Molecular Biology Laboratory, Heidelberg, Germany 7 Department of Marine Biology and Oceanography, Institut de Ciènces del -
Nitrogen Fixation Among Marine Bacterioplankton
Nitrogen Fixation Among Marine Bacterioplankton Kjärstin H. Boström Department of Biology & Environmental Science University of Kalmar Sweden 2006 AKADEMISK AVHANDLING som för avläggande av Filosofie Doktorsexamen vid Naturvetenskapliga Fakulteten vid högskolan i Kalmar kommer att offentligt försvaras fredagen den 20 januari 2006 Doctoral thesis 2006 University of Kalmar Faculty of Natural Sciences Dissertation series No. 26 Kjärstin H. Boström Department of Biology and Environmental Science University of Kalmar, SE 391 82 Kalmar, Sweden Supervisor: Dr. Lasse Riemann, Assistant Professor Department of Biology and Environmental Science University of Kalmar, SE 391 82 Kalmar, Sweden Opponent: Dr. Grieg Steward, Assistant Professor Department of Oceanography University of Hawaii, Honolulu, HI 96822, USA 2006 Kjärstin H. Boström ISBN: 91-89584-52-X, ISSN: 1650-2779, pp. 1-26 Printed by: Högskolans tryckeri, Kalmar 2 To Frida & Emma 3 TABLE OF CONTENTS TABLE OF CONTENTS.............................................................................................................4 ABSTRACT...................................................................................................................................5 SVENSK SAMMANFATTNING...............................................................................................6 LIST OF PUBLICATIONS.........................................................................................................8 INTRODUCTION ........................................................................................................................9 -
Diversity of Free-Living Nitrogen Fixing Bacteria in the Badlands of South Dakota Bibha Dahal South Dakota State University
South Dakota State University Open PRAIRIE: Open Public Research Access Institutional Repository and Information Exchange Theses and Dissertations 2016 Diversity of Free-living Nitrogen Fixing Bacteria in the Badlands of South Dakota Bibha Dahal South Dakota State University Follow this and additional works at: http://openprairie.sdstate.edu/etd Part of the Bacteriology Commons, and the Environmental Microbiology and Microbial Ecology Commons Recommended Citation Dahal, Bibha, "Diversity of Free-living Nitrogen Fixing Bacteria in the Badlands of South Dakota" (2016). Theses and Dissertations. 688. http://openprairie.sdstate.edu/etd/688 This Thesis - Open Access is brought to you for free and open access by Open PRAIRIE: Open Public Research Access Institutional Repository and Information Exchange. It has been accepted for inclusion in Theses and Dissertations by an authorized administrator of Open PRAIRIE: Open Public Research Access Institutional Repository and Information Exchange. For more information, please contact [email protected]. DIVERSITY OF FREE-LIVING NITROGEN FIXING BACTERIA IN THE BADLANDS OF SOUTH DAKOTA BY BIBHA DAHAL A thesis submitted in partial fulfillment of the requirements for the Master of Science Major in Biological Sciences Specialization in Microbiology South Dakota State University 2016 iii ACKNOWLEDGEMENTS “Always aim for the moon, even if you miss, you’ll land among the stars”.- W. Clement Stone I would like to express my profuse gratitude and heartfelt appreciation to my advisor Dr. Volker Brӧzel for providing me a rewarding place to foster my career as a scientist. I am thankful for his implicit encouragement, guidance, and support throughout my research. This research would not be successful without his guidance and inspiration. -
A Quest for Ecologically Based Pest Management Systems
A Quest for Ecologically Based Pest Management Systems M. A. ALTIERI W. ,!. LEWIS Division of Biological Control AR-SEA-USDA University of California, Berkeley Southern Grain Insects Research Laboratory Berkeley, California 94720 Tifton, Georgia 31793 ABSTRACT / The article presents a holistic approach to studying and applying crop protection in agricultural systems A theoretical P. B. MARTIN framework of integrated pest management (IPM) is presented that Centro Nacional de Pesquisa de Gado de Corte allows an understanding of pest population processes on a whole- EMBRAPA agroecological-system basis The need for and emergence of holis- Campo Grande, MS tic research on agroecosystems is discussed, as are the current Brazil trends in ecological theory and pest management The search for ways to control the environment is a and profits with an appreciation of the importance of maintain- fundamental drive in human history. At the forefront of these ing resource diversity and biological stability as a means of struggles is the quest for ways to deal with agricultural pest helping sustain relatively high yields on a long-term basis. organisms. People have experienced direct competition with Moreover, in our educational programs the agroecosystem has arthropod pests since the beginning of agricultural activities. In been largely viewed as consisting of components to be studied those times, the operation of farms was an art based on field separately by various independent disciplines. Unfortunately, knowledge accumulated from years of experience and transmit- this orientation disregards the holism of the agroecosystem, ted from generation to generation. Primitive farmers lacked masking features of the system that could be critical for elements of refined technology and the capability to produce at understanding the complex system interactions that govern the a high capacity. -
Impact of IITA-Improved Germplasm on Maize Production in West and Central Africa
Impact of IITA-improved germplasm on maize production in West and Central Africa V.M. Manyong, J.G. Kling, K.O. Makinde, S.O. Ajala, and A. Menkir IITA Ibadan, Nigeria Telephone: (+234 2)241 2626 Fax: (+234 2)241 2221 E-mail: [email protected] Web: www.cgiar.org/iita International mailing address: c/o L.W. Lambourn & Co., Carolyn House 26 Dingwall Road, Croydon CR9 3EE, UK Within Nigeria: Oyo Road, PMB 5320 Ibadan, Oyo State Copies of this publication may be obtained from Distribution Unit, IITA © International Institute of Tropical Agriculture, 2000 ISBN 978 131 186 X Printed in Nigeria by IITA and Modern Design & Associates Ltd. Impact of IITA-improved germplasm on maize production in West and Central Africa V.M. Manyong, J.G. Kling, K.O. Makinde, S.O. Ajala, and A. Menkir International Institute of Tropical Agriculture, Ibadan, Nigeria Abstract The International Institute of Agriculture (IITA) is among the major suppliers of genetic materials to national agricultural research and extension systems in West and Central Africa for the development of improved maize varieties. This paper presents the results of a survey of the impact of germplasm from IITA on maize production and food security in 11 countries, which together contain over 90% of the area cultivated to maize in West and Central Africa. Between 1965 and 1998, the public sectors of these countries released a total of 186 varieties while the private sectors released 86 varieties. In the 1990s, IITA was the major source of maize germplasm used by these countries. Increased maize production from improved varieties was 2.6 million tonnes of grain in 1998, which could provide 2200 kcal per person per day to about 9.3 million people for one year. -
A Beginner's Guide to Small-Scale Tropical
A BEGINNER’S GUIDE TO SMALL-SCALE TROPICAL AGRICULTURE By Dr. Franklin W. Martin Published 1988; Revised by Larry Yarger, 2008 Small Farm in Viet Nam Highlands (Photo: Larry Yarger) What’s Inside: INTRODUCTION Introduction So you want to help people in the tropics. Beautiful! Nature of Small-scale Tropical The tropics are waiting for you. No matter what your Agriculture abilities, you can make life better for others in the tropics. Your concern for the physical and spiritual well-being of people can be translated into fruitful Some Common Problems service. Your first asset is your good will, your - Water willingness to serve. - Weeds - Soil Fertility As you begin to get acquainted with the tropics, you - Appropriate Species & Varieties will find that common problems include production - Pests, Diseases & IPM and the use of food. Among the poor, those that most - Nutrition need your help, obtaining one's daily bread is a - Hygiene constant concern. This is not only a question of - Family Economy eating. It is first a matter of production, second of distribution and storage, and third of preparation of Steps toward Improving meals and balancing the diet. Small-Scale Tropical Agriculture - Stay Informed It is highly probable that when you arrive in the - Develop Diagnostic Skills tropics you will not have all the knowledge you need - Select Feasible Alternatives of food production and use in order to help the poor-- - Test the Alternatives in the tropics-- with their priority needs. It does not - Involve Farmers to Verify Trials matter what experience and training you may have had in your temperate homeland; you cannot be fully In Conclusion… prepared in advance. -
Nitrogenase; Nitrogen Fixation Vs Haber-Bosch Process
Nitrogenase; Nitrogen Fixation vs Haber-Bosch Process Anna Balinski, Jacob Watson Texas A&M University, College Station, TX 77843 Abstract Comparison of Processes Haber-Bosch Process Overview:The Nitrogen Cycle is a chemical cycle which recycles nitrogen into usable forms, such as ammonium, nitrates, and nitrites. Nitrogen and nitrogen compounds are important Haber-Bosch Reaction because they make up our atmosphere as well as our earthly environments. Nitrogen can be recycled into ammonium naturally via nitrogen fixing bacteria, or synthetically using the + - Discovered by Fritz Haber, process scaled up by Haber-Bosch process. Nitrogen fixation in bacteria follows the reaction N2 + 8 H + 8 e 2 • Carl Bosch NH3 + H2 and is powered by the hydrolysis of 16 ATP equivalents. The Haber-Bosch process Response to Germany’s need for ammonia for follows the reaction scheme of N2 + 3 H2 2 NH3 and is powered by using high pressures, • temperatures, and catalysts. Using the Haber-Bosch process an optimum yield of 97% explosive during WWI ammonium can be obtained. These reactions both use diatomic nitrogen as well as Nitrogen Fixation Reaction • Prolonged WWI when Germany was able to hydrogen, but differ in their final products as bacterial nitrogen fixation releases hydrogen produce fertilizer and explosives gas as a byproduct. Bacteria in the soil use nitrogen to create energy to grow and reproduce Fritz Haber Carl Bosch as well as to introduce nitrogen for use by other species. The Haber-Bosch process produces ammonium which can be used for a range of activities such as the production of fertilizers, or even explosives.