Network Theory: Universal Properties of TV Shows Final Report: Math 485
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Networkx: Network Analysis with Python
NetworkX: Network Analysis with Python Salvatore Scellato Full tutorial presented at the XXX SunBelt Conference “NetworkX introduction: Hacking social networks using the Python programming language” by Aric Hagberg & Drew Conway Outline 1. Introduction to NetworkX 2. Getting started with Python and NetworkX 3. Basic network analysis 4. Writing your own code 5. You are ready for your project! 1. Introduction to NetworkX. Introduction to NetworkX - network analysis Vast amounts of network data are being generated and collected • Sociology: web pages, mobile phones, social networks • Technology: Internet routers, vehicular flows, power grids How can we analyze this networks? Introduction to NetworkX - Python awesomeness Introduction to NetworkX “Python package for the creation, manipulation and study of the structure, dynamics and functions of complex networks.” • Data structures for representing many types of networks, or graphs • Nodes can be any (hashable) Python object, edges can contain arbitrary data • Flexibility ideal for representing networks found in many different fields • Easy to install on multiple platforms • Online up-to-date documentation • First public release in April 2005 Introduction to NetworkX - design requirements • Tool to study the structure and dynamics of social, biological, and infrastructure networks • Ease-of-use and rapid development in a collaborative, multidisciplinary environment • Easy to learn, easy to teach • Open-source tool base that can easily grow in a multidisciplinary environment with non-expert users -
A Network Approach of the Mandatory Influenza Vaccination Among Healthcare Workers
Wright State University CORE Scholar Master of Public Health Program Student Publications Master of Public Health Program 2014 Best Practices: A Network Approach of the Mandatory Influenza Vaccination Among Healthcare Workers Greg Attenweiler Wright State University - Main Campus Angie Thomure Wright State University - Main Campus Follow this and additional works at: https://corescholar.libraries.wright.edu/mph Part of the Influenza Virus accinesV Commons Repository Citation Attenweiler, G., & Thomure, A. (2014). Best Practices: A Network Approach of the Mandatory Influenza Vaccination Among Healthcare Workers. Wright State University, Dayton, Ohio. This Master's Culminating Experience is brought to you for free and open access by the Master of Public Health Program at CORE Scholar. It has been accepted for inclusion in Master of Public Health Program Student Publications by an authorized administrator of CORE Scholar. For more information, please contact library- [email protected]. Running Head: A NETWORK APPROACH 1 Best Practices: A network approach of the mandatory influenza vaccination among healthcare workers Greg Attenweiler Angie Thomure Wright State University A NETWORK APPROACH 2 Acknowledgements We would like to thank Michele Battle-Fisher and Nikki Rogers for donating their time and resources to help us complete our Culminating Experience. We would also like to thank Michele Battle-Fisher for creating the simulation used in our Culmination Experience. Finally we would like to thank our family and friends for all of the -
Emerging Topics in Internet Technology: a Complex Networks Approach
1 Emerging Topics in Internet Technology: A Complex Networks Approach Bisma S. Khan 1, Muaz A. Niazi *,2 COMSATS Institute of Information Technology, Islamabad, Pakistan Abstract —Communication networks, in general, and internet technology, in particular, is a fast-evolving area of research. While it is important to keep track of emerging trends in this domain, it is such a fast-growing area that it can be very difficult to keep track of literature. The problem is compounded by the fast-growing number of citation databases. While other databases are gradually indexing a large set of reliable content, currently the Web of Science represents one of the most highly valued databases. Research indexed in this database is known to highlight key advancements in any domain. In this paper, we present a Complex Network-based analytical approach to analyze recent data from the Web of Science in communication networks. Taking bibliographic records from the recent period of 2014 to 2017 , we model and analyze complex scientometric networks. Using bibliometric coupling applied over complex citation data we present answers to co-citation patterns of documents, co-occurrence patterns of terms, as well as the most influential articles, among others, We also present key pivot points and intellectual turning points. Complex network analysis of the data demonstrates a considerably high level of interest in two key clusters labeled descriptively as “social networks” and “computer networks”. In addition, key themes in highly cited literature were clearly identified as “communication networks,” “social networks,” and “complex networks”. Index Terms —CiteSpace, Communication Networks, Network Science, Complex Networks, Visualization, Data science. -
Analysis of Topological Characteristics of Huge Online Social Networking Services Yong-Yeol Ahn, Seungyeop Han, Haewoon Kwak, Young-Ho Eom, Sue Moon, Hawoong Jeong
1 Analysis of Topological Characteristics of Huge Online Social Networking Services Yong-Yeol Ahn, Seungyeop Han, Haewoon Kwak, Young-Ho Eom, Sue Moon, Hawoong Jeong Abstract— Social networking services are a fast-growing busi- the statistics severely and it is imperative to use large data sets ness in the Internet. However, it is unknown if online relationships in network structure analysis. and their growth patterns are the same as in real-life social It is only very recently that we have seen research results networks. In this paper, we compare the structures of three online social networking services: Cyworld, MySpace, and orkut, from large networks. Novel network structures from human each with more than 10 million users, respectively. We have societies and communication systems have been unveiled; just access to complete data of Cyworld’s ilchon (friend) relationships to name a few are the Internet and WWW [3] and the patents, and analyze its degree distribution, clustering property, degree Autonomous Systems (AS), and affiliation networks [4]. Even correlation, and evolution over time. We also use Cyworld data in the short history of the Internet, SNSs are a fairly new to evaluate the validity of snowball sampling method, which we use to crawl and obtain partial network topologies of MySpace phenomenon and their network structures are not yet studied and orkut. Cyworld, the oldest of the three, demonstrates a carefully. The social networks of SNSs are believed to reflect changing scaling behavior over time in degree distribution. The the real-life social relationships of people more accurately than latest Cyworld data’s degree distribution exhibits a multi-scaling any other online networks. -
Introduction to Network Science & Visualisation
IFC – Bank Indonesia International Workshop and Seminar on “Big Data for Central Bank Policies / Building Pathways for Policy Making with Big Data” Bali, Indonesia, 23-26 July 2018 Introduction to network science & visualisation1 Kimmo Soramäki, Financial Network Analytics 1 This presentation was prepared for the meeting. The views expressed are those of the author and do not necessarily reflect the views of the BIS, the IFC or the central banks and other institutions represented at the meeting. FNA FNA Introduction to Network Science & Visualization I Dr. Kimmo Soramäki Founder & CEO, FNA www.fna.fi Agenda Network Science ● Introduction ● Key concepts Exposure Networks ● OTC Derivatives ● CCP Interconnectedness Correlation Networks ● Housing Bubble and Crisis ● US Presidential Election Network Science and Graphs Analytics Is already powering the best known AI applications Knowledge Social Product Economic Knowledge Payment Graph Graph Graph Graph Graph Graph Network Science and Graphs Analytics “Goldman Sachs takes a DIY approach to graph analytics” For enhanced compliance and fraud detection (www.TechTarget.com, Mar 2015). “PayPal relies on graph techniques to perform sophisticated fraud detection” Saving them more than $700 million and enabling them to perform predictive fraud analysis, according to the IDC (www.globalbankingandfinance.com, Jan 2016) "Network diagnostics .. may displace atomised metrics such as VaR” Regulators are increasing using network science for financial stability analysis. (Andy Haldane, Bank of England Executive -
A Centrality Measure for Electrical Networks
Carnegie Mellon Electricity Industry Center Working Paper CEIC-07 www.cmu.edu/electricity 1 A Centrality Measure for Electrical Networks Paul Hines and Seth Blumsack types of failures. Many classifications of network structures Abstract—We derive a measure of “electrical centrality” for have been studied in the field of complex systems, statistical AC power networks, which describes the structure of the mechanics, and social networking [5,6], as shown in Figure 2, network as a function of its electrical topology rather than its but the two most fruitful and relevant have been the random physical topology. We compare our centrality measure to network model of Erdös and Renyi [7] and the “small world” conventional measures of network structure using the IEEE 300- bus network. We find that when measured electrically, power model inspired by the analyses in [8] and [9]. In the random networks appear to have a scale-free network structure. Thus, network model, nodes and edges are connected randomly. The unlike previous studies of the structure of power grids, we find small-world network is defined largely by relatively short that power networks have a number of highly-connected “hub” average path lengths between node pairs, even for very large buses. This result, and the structure of power networks in networks. One particularly important class of small-world general, is likely to have important implications for the reliability networks is the so-called “scale-free” network [10, 11], which and security of power networks. is characterized by a more heterogeneous connectivity. In a Index Terms—Scale-Free Networks, Connectivity, Cascading scale-free network, most nodes are connected to only a few Failures, Network Structure others, but a few nodes (known as hubs) are highly connected to the rest of the network. -
Correlation in Complex Networks
Correlation in Complex Networks by George Tsering Cantwell A dissertation submitted in partial fulfillment of the requirements for the degree of Doctor of Philosophy (Physics) in the University of Michigan 2020 Doctoral Committee: Professor Mark Newman, Chair Professor Charles Doering Assistant Professor Jordan Horowitz Assistant Professor Abigail Jacobs Associate Professor Xiaoming Mao George Tsering Cantwell [email protected] ORCID iD: 0000-0002-4205-3691 © George Tsering Cantwell 2020 ACKNOWLEDGMENTS First, I must thank Mark Newman for his support and mentor- ship throughout my time at the University of Michigan. Further thanks are due to all of the people who have worked with me on projects related to this thesis. In alphabetical order they are Eliz- abeth Bruch, Alec Kirkley, Yanchen Liu, Benjamin Maier, Gesine Reinert, Maria Riolo, Alice Schwarze, Carlos Serván, Jordan Sny- der, Guillaume St-Onge, and Jean-Gabriel Young. ii TABLE OF CONTENTS Acknowledgments .................................. ii List of Figures ..................................... v List of Tables ..................................... vi List of Appendices .................................. vii Abstract ........................................ viii Chapter 1 Introduction .................................... 1 1.1 Why study networks?...........................2 1.1.1 Example: Modeling the spread of disease...........3 1.2 Measures and metrics...........................8 1.3 Models of networks............................ 11 1.4 Inference................................. -
Networkx Reference Release 1.9.1
NetworkX Reference Release 1.9.1 Aric Hagberg, Dan Schult, Pieter Swart September 20, 2014 CONTENTS 1 Overview 1 1.1 Who uses NetworkX?..........................................1 1.2 Goals...................................................1 1.3 The Python programming language...................................1 1.4 Free software...............................................2 1.5 History..................................................2 2 Introduction 3 2.1 NetworkX Basics.............................................3 2.2 Nodes and Edges.............................................4 3 Graph types 9 3.1 Which graph class should I use?.....................................9 3.2 Basic graph types.............................................9 4 Algorithms 127 4.1 Approximation.............................................. 127 4.2 Assortativity............................................... 132 4.3 Bipartite................................................. 141 4.4 Blockmodeling.............................................. 161 4.5 Boundary................................................. 162 4.6 Centrality................................................. 163 4.7 Chordal.................................................. 184 4.8 Clique.................................................. 187 4.9 Clustering................................................ 190 4.10 Communities............................................... 193 4.11 Components............................................... 194 4.12 Connectivity.............................................. -
Exploring Network Structure, Dynamics, and Function Using Networkx
Proceedings of the 7th Python in Science Conference (SciPy 2008) Exploring Network Structure, Dynamics, and Function using NetworkX Aric A. Hagberg ([email protected])– Los Alamos National Laboratory, Los Alamos, New Mexico USA Daniel A. Schult ([email protected])– Colgate University, Hamilton, NY USA Pieter J. Swart ([email protected])– Los Alamos National Laboratory, Los Alamos, New Mexico USA NetworkX is a Python language package for explo- and algorithms, to rapidly test new hypotheses and ration and analysis of networks and network algo- models, and to teach the theory of networks. rithms. The core package provides data structures The structure of a network, or graph, is encoded in the for representing many types of networks, or graphs, edges (connections, links, ties, arcs, bonds) between including simple graphs, directed graphs, and graphs nodes (vertices, sites, actors). NetworkX provides ba- with parallel edges and self-loops. The nodes in Net- sic network data structures for the representation of workX graphs can be any (hashable) Python object simple graphs, directed graphs, and graphs with self- and edges can contain arbitrary data; this flexibil- loops and parallel edges. It allows (almost) arbitrary ity makes NetworkX ideal for representing networks objects as nodes and can associate arbitrary objects to found in many different scientific fields. edges. This is a powerful advantage; the network struc- In addition to the basic data structures many graph ture can be integrated with custom objects and data algorithms are implemented for calculating network structures, complementing any pre-existing code and properties and structure measures: shortest paths, allowing network analysis in any application setting betweenness centrality, clustering, and degree dis- without significant software development. -
Strongly Connected Components and Biconnected Components
Strongly Connected Components and Biconnected Components Daniel Wisdom 27 January 2017 1 2 3 4 5 6 7 8 Figure 1: A directed graph. Credit: Crash Course Coding Companion. 1 Strongly Connected Components A strongly connected component (SCC) is a set of vertices where every vertex can reach every other vertex. In an undirected graph the SCCs are just the groups of connected vertices. We can find them using a simple DFS. This works because, in an undirected graph, u can reach v if and only if v can reach u. This is not true in a directed graph, which makes finding the SCCs harder. More on that later. 2 Kernel graph We can travel between any two nodes in the same strongly connected component. So what if we replaced each strongly connected component with a single node? This would give us what we call the kernel graph, which describes the edges between strongly connected components. Note that the kernel graph is a directed acyclic graph because any cycles would constitute an SCC, so the cycle would be compressed into a kernel. 3 1,2,5,6 4,7 8 Figure 2: Kernel graph of the above directed graph. 3 Tarjan's SCC Algorithm In a DFS traversal of the graph every SCC will be a subtree of the DFS tree. This subtree is not necessarily proper, meaning that it may be missing some branches which are their own SCCs. This means that if we can identify every node that is the root of its SCC in the DFS, we can enumerate all the SCCs. -
Analyzing Social Media Network for Students in Presidential Election 2019 with Nodexl
ANALYZING SOCIAL MEDIA NETWORK FOR STUDENTS IN PRESIDENTIAL ELECTION 2019 WITH NODEXL Irwan Dwi Arianto Doctoral Candidate of Communication Sciences, Airlangga University Corresponding Authors: [email protected] Abstract. Twitter is widely used in digital political campaigns. Twitter as a social media that is useful for building networks and even connecting political participants with the community. Indonesia will get a demographic bonus starting next year until 2030. The number of productive ages that will become a demographic bonus if not recognized correctly can be a problem. The election organizer must seize this opportunity for the benefit of voter participation. This study aims to describe the network structure of students in the 2019 presidential election. The first debate was held on January 17, 2019 as a starting point for data retrieval on Twitter social media. This study uses data sources derived from Twitter talks from 17 January 2019 to 20 August 2019 with keywords “#pilpres2019 OR #mahasiswa since: 2019-01-17”. The data obtained were analyzed by the communication network analysis method using NodeXL software. Our Analysis found that Top Influencer is @jokowi, as well as Top, Mentioned also @jokowi while Top Tweeters @okezonenews and Top Replied-To @hasmi_bakhtiar. Jokowi is incumbent running for re-election with Ma’ruf Amin (Senior Muslim Cleric) as his running mate against Prabowo Subianto (a former general) and Sandiaga Uno as his running mate (former vice governor). This shows that the more concentrated in the millennial generation in this case students are presidential candidates @jokowi. @okezonenews, the official twitter account of okezone.com (MNC Media Group). -
Network Biology. Applications in Medicine and Biotechnology [Verkkobiologia
Dissertation VTT PUBLICATIONS 774 Erno Lindfors Network Biology Applications in medicine and biotechnology VTT PUBLICATIONS 774 Network Biology Applications in medicine and biotechnology Erno Lindfors Department of Biomedical Engineering and Computational Science Doctoral dissertation for the degree of Doctor of Science in Technology to be presented with due permission of the Aalto Doctoral Programme in Science, The Aalto University School of Science and Technology, for public examination and debate in Auditorium Y124 at Aalto University (E-hall, Otakaari 1, Espoo, Finland) on the 4th of November, 2011 at 12 noon. ISBN 978-951-38-7758-3 (soft back ed.) ISSN 1235-0621 (soft back ed.) ISBN 978-951-38-7759-0 (URL: http://www.vtt.fi/publications/index.jsp) ISSN 1455-0849 (URL: http://www.vtt.fi/publications/index.jsp) Copyright © VTT 2011 JULKAISIJA – UTGIVARE – PUBLISHER VTT, Vuorimiehentie 5, PL 1000, 02044 VTT puh. vaihde 020 722 111, faksi 020 722 4374 VTT, Bergsmansvägen 5, PB 1000, 02044 VTT tel. växel 020 722 111, fax 020 722 4374 VTT Technical Research Centre of Finland, Vuorimiehentie 5, P.O. Box 1000, FI-02044 VTT, Finland phone internat. +358 20 722 111, fax + 358 20 722 4374 Technical editing Marika Leppilahti Kopijyvä Oy, Kuopio 2011 Erno Lindfors. Network Biology. Applications in medicine and biotechnology [Verkkobiologia. Lääke- tieteellisiä ja bioteknisiä sovelluksia]. Espoo 2011. VTT Publications 774. 81 p. + app. 100 p. Keywords network biology, s ystems b iology, biological d ata visualization, t ype 1 di abetes, oxida- tive stress, graph theory, network topology, ubiquitous complex network properties Abstract The concept of systems biology emerged over the last decade in order to address advances in experimental techniques.