Variable Prediction Accuracy of Polygenic Scores Within an Ancestry
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Race and Membership in American History: the Eugenics Movement
Race and Membership in American History: The Eugenics Movement Facing History and Ourselves National Foundation, Inc. Brookline, Massachusetts Eugenicstextfinal.qxp 11/6/2006 10:05 AM Page 2 For permission to reproduce the following photographs, posters, and charts in this book, grateful acknowledgement is made to the following: Cover: “Mixed Types of Uncivilized Peoples” from Truman State University. (Image #1028 from Cold Spring Harbor Eugenics Archive, http://www.eugenics archive.org/eugenics/). Fitter Family Contest winners, Kansas State Fair, from American Philosophical Society (image #94 at http://www.amphilsoc.org/ library/guides/eugenics.htm). Ellis Island image from the Library of Congress. Petrus Camper’s illustration of “facial angles” from The Works of the Late Professor Camper by Thomas Cogan, M.D., London: Dilly, 1794. Inside: p. 45: The Works of the Late Professor Camper by Thomas Cogan, M.D., London: Dilly, 1794. 51: “Observations on the Size of the Brain in Various Races and Families of Man” by Samuel Morton. Proceedings of the Academy of Natural Sciences, vol. 4, 1849. 74: The American Philosophical Society. 77: Heredity in Relation to Eugenics, Charles Davenport. New York: Henry Holt &Co., 1911. 99: Special Collections and Preservation Division, Chicago Public Library. 116: The Missouri Historical Society. 119: The Daughters of Edward Darley Boit, 1882; John Singer Sargent, American (1856-1925). Oil on canvas; 87 3/8 x 87 5/8 in. (221.9 x 222.6 cm.). Gift of Mary Louisa Boit, Julia Overing Boit, Jane Hubbard Boit, and Florence D. Boit in memory of their father, Edward Darley Boit, 19.124. -
Cognitive Ability and Education: How Behavioural Genetic Research Has Advanced Our Knowledge and Understanding of Their Association
Cognitive ability and education: how behavioural genetic research has advanced our knowledge and understanding of their association Margherita Malanchini1,2,3, Kaili Rimfeld2, Andrea G. Allegrini2, Stuart J. Ritchie2, & Robert Plomin2 1 Department of Biological and Experimental Psychology, Queen Mary University of London, United Kingdom. 2 Social, Genetic and Developmental Psychiatry Centre, Institute of Psychiatry, Psychology and Neuroscience, King’s College London, United Kingdom. 3 Population Research Center, The University of Texas at Austin, United States. Correspondence: Margherita Malanchini, Department of Biological and Experimental Psychology, Queen Mary University of London, Office 2.02, G.E. Fogg Building, Mile End Road, London E1 4NS. E-mail: [email protected] Abstract Cognitive ability and educational success predict positive outcomes across the lifespan, from higher earnings to better health and longevity. The shared positive outcomes associated with cognitive ability and education are emblematic of the strong interconnections between them. Part of the observed associations between cognitive ability and education, as well as their links with wealth, morbidity and mortality, are rooted in genetic variation. The current review evaluates the contribution of decades of behavioural genetic research to our knowledge and understanding of the biological and environmental basis of the association between cognitive ability and education. The evidence reviewed points to a strong genetic basis in their association, observed from middle childhood to old age, which is amplified by environmental experiences. In addition, the strong stability and heritability of educational success are not driven entirely by cognitive ability. This highlights the contribution of other educationally relevant noncognitive characteristics. Considering both cognitive and noncognitive skills as well as their biological and environmental underpinnings will be fundamental in moving towards a comprehensive, evidence-based model of education. -
Identifying Intergenerational Risk Factors for ADHD Symptoms Using Polygenic Scores in the Norwegian Mother, Father and Child Cohort
medRxiv preprint doi: https://doi.org/10.1101/2021.02.16.21251737; this version posted February 20, 2021. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted medRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC-ND 4.0 International license . Intergenerational transmission of ADHD Identifying intergenerational risk factors for ADHD symptoms using polygenic scores in the Norwegian Mother, Father and Child Cohort Jean-Baptiste Pingault1,2*, Wikus Barkhuizen1*, Biyao Wang1, Laurie J. Hannigan3,4, Espen Moen Eilertsen6, Ole A. Andreassen7, Helga Ask5, Martin Tesli5,7, Ragna Bugge Askeland4,5, George Davey Smith4,9, Neil Davies4,8,9, Ted Reichborn-Kjennerud5, †Eivind Ystrom5,6, †Alexandra Havdahl3,5,6 *Equal first authors †Equal last authors 1 Division of Psychology and Language Sciences, University College London, London, United Kingdom 2 MRC Social, Genetic and Developmental Psychiatry Centre, Institute of Psychiatry, King’s College, London, United Kingdom 3 Nic Waals Institute, Lovisenberg Diaconal Hospital, Oslo, Norway 4 Medical Research Council Integrative Epidemiology Unit, University of Bristol, BS8 2BN, United Kingdom 5 Department of Mental Disorders, Norwegian Institute of Public Health, Oslo, Norway 6 PROMENTA Research Center, Department of Psychology, University of Oslo, Oslo, Norway 7 NORMENT Centre, Institute of Clinical Medicine, University of Oslo and Division of Mental Health and Addiction, Oslo University Hospital, Oslo, Norway 8 K.G. Jebsen Center for Genetic Epidemiology, Department of Public Health and Nursing, NTNU, Norwegian University of Science and Technology, Norway 9 Population Health Sciences, Bristol Medical School, University of Bristol, Barley House, Oakfield Grove, Bristol, BS8 2BN, United Kingdom Address correspondence to Dr. -
Is There a Genetic Correlation Between General Factors of Intelligence and Personality?
Twin Research and Human Genetics Volume 18 Number 3 pp. 234–242 C The Author(s) 2015 doi:10.1017/thg.2015.28 Is There a Genetic Correlation Between General Factors of Intelligence and Personality? John C. Loehlin,1 Meike Bartels,2 Dorret I. Boomsma,2 Denis Bratko,3 Nicholas G. Martin,4 Robert C. Nichols,5 and Margaret J. Wright4 1Psychology Department, University of Texas, Austin, Texas, USA 2Department of Biological Psychology, VU University, Amsterdam, the Netherlands 3Department of Psychology, Faculty of Social Sciences and Humanities, University of Zagreb, Zagreb, Croatia 4QIMR Berghofer Medical Research Institute, Brisbane, Queensland, Australia 5Jamul, CA, USA We tested a hypothesis that there is no genetic correlation between general factors of intelligence and personality, despite both having been selected for in human evolution. This was done using twin samples from Australia, the United States, the Netherlands, Great Britain, and Croatia, comprising altogether 1,748 monozygotic and 1,329 same-sex dizygotic twin pairs. Although parameters in the model-fitting differed among the twin samples, the genetic correlation between the two general factors could be set to zero, with a better fit if the U.S. sample was excepted. Keywords: general factor of intelligence, general factor of personality, heritability, mutation-selection balance, life history theory, twins The concept of hierarchical structure in the domains of in- artifact (Backstr¨ om¨ et al. 2009; Pettersson et al., 2012)or telligence and personality, featuring a single general factor declared it to be psychometrically weak (Revelle & Wilt, at the top, have been controversial ever since general fac- 2013). However, in one study, partialing out self-esteem or tors were advocated early in the 20th century by Spearman social desirability measures did not greatly reduce a GFP (1904)andWebb(1915). -
Common Genetic Variation and Schizophrenia Polygenic Risk
RESEARCH ARTICLE Neuropsychiatric Genetics Common Genetic Variation and Schizophrenia Polygenic Risk Influence Neurocognitive Performance in Young Adulthood Alex Hatzimanolis,1 Pallav Bhatnagar,2 Anna Moes,2 Ruihua Wang,1 Panos Roussos,3,4 Panos Bitsios,5 Costas N. Stefanis,6 Ann E. Pulver,1 Dan E. Arking,2 Nikolaos Smyrnis,6,7 Nicholas C. Stefanis,6,7 and Dimitrios Avramopoulos1,2* 1Department of Psychiatry and Behavioral Sciences, Johns Hopkins University School of Medicine, Baltimore, Maryland 2McKusick-Nathans Institute of Genetic Medicine, Johns Hopkins University School of Medicine, Baltimore, Maryland 3Department of Psychiatry, Friedman Brain Institute and Department of Genetics and Genomics Science, Institute of Multiscale Biology, Icahn School of Medicine at Mount Sinai, New York, New York 4James J. Peters Veterans Affairs Medical Center, Bronx, New York, New York 5Department of Psychiatry and Behavioral Sciences, Faculty of Medicine, University of Crete, Heraklion, Greece 6University Mental Health Research Institute, Athens, Greece 7Department of Psychiatry, Eginition Hospital, University of Athens Medical School, Athens, Greece Manuscript Received: 3 December 2014; Manuscript Accepted: 29 April 2015 Neurocognitive abilities constitute complex traits with consid- erable heritability. Impaired neurocognition is typically ob- How to Cite this Article: served in schizophrenia (SZ), whereas convergent evidence Hatzimanolis A, Bhatnagar P, Moes A, has shown shared genetic determinants between neurocognition Wang R, Roussos P, Bitsios P, Stefanis CN, and SZ. Here, we report a genome-wide association study Pulver AE, Arking DE, Smyrnis N, Stefanis (GWAS) on neuropsychological and oculomotor traits, linked NC, Avramopoulos D. 2015. Common to SZ, in a general population sample of healthy young males Genetic Variation and Schizophrenia ¼ (n 1079). -
Polygenic Methods and Their Application to Psychiatric Traits
This is the peer reviewed version of the following article: Wray, N. R., & Visscher, P. M. (2015). Quantitative genetics of disease traits. Wray, N. R., Lee, S. H., Mehta, D., Vinkhuyzen, A. A., Dudbridge, F., & Middeldorp, C. M. (2014). Research review: polygenic methods and their application to psychiatric traits. Journal of Child Psychology and Psychiatry, 55(10), 1068–1087. DOI: 10.1111/jcpp.12295 . This article may be used for non-commercial purposes in accordance with Wiley Terms and Conditions for self-archiving. Polygenic methods and their application to psychiatric traits Naomi R Wray1*, S Hong Lee1, Divya Mehta1, Anna AE Vinkhuyzen1, Frank Dudbridge2, Christel M Middeldorp3,4 1. The University of Queensland, Queensland Brain Institute, Queensland, Australia 4068 2. Department of Non-Communicable Disease Epidemiology, London School of Hygiene and Tropical Medicine, London, UK 3. Department of Biological Psychology, Neuroscience Campus Amsterdam, VU University Amsterdam, The Netherlands 4. Department of Child and Adolescent Psychiatry, GGZ inGeest/VU University Medical Center, Amsterdam, The Netherlands * Corresponding author. [email protected] Abstract Background Despite evidence from twin and family studies for an important contribution of genetic factors to both childhood and adult onset psychiatric disorders, identifying robustly associated specific DNA variants has proved challenging. In the pre-genomics era the genetic architecture (number, frequency and effect size of risk variants) of complex genetic disorders was unknown. Empirical evidence for the genetic architecture of psychiatric disorders is emerging from the genetic studies of the last five years. Methods and scope We review the methods investigating the polygenic nature of complex disorders. -
An Atlas of Genetic Correlations Across Human Diseases and Traits
An Atlas of Genetic Correlations across Human Diseases and Traits The Harvard community has made this article openly available. Please share how this access benefits you. Your story matters Citation Bulik-Sullivan, B., H. K. Finucane, V. Anttila, A. Gusev, F. R. Day, P. Loh, L. Duncan, et al. 2015. “An Atlas of Genetic Correlations across Human Diseases and Traits.” Nature genetics 47 (11): 1236-1241. doi:10.1038/ng.3406. http://dx.doi.org/10.1038/ng.3406. Published Version doi:10.1038/ng.3406 Citable link http://nrs.harvard.edu/urn-3:HUL.InstRepos:27320469 Terms of Use This article was downloaded from Harvard University’s DASH repository, and is made available under the terms and conditions applicable to Other Posted Material, as set forth at http:// nrs.harvard.edu/urn-3:HUL.InstRepos:dash.current.terms-of- use#LAA HHS Public Access Author manuscript Author Manuscript Author ManuscriptNat Genet Author Manuscript. Author manuscript; Author Manuscript available in PMC 2016 May 01. Published in final edited form as: Nat Genet. 2015 November ; 47(11): 1236–1241. doi:10.1038/ng.3406. An Atlas of Genetic Correlations across Human Diseases and Traits Brendan Bulik-Sullivan1,2,3,*, Hilary K Finucane4,*, Verneri Anttila1,2,3, Alexander Gusev5,6, Felix R. Day7, Po-Ru Loh1,5, ReproGen Consortium8, Psychiatric Genomics Consortium8, Genetic Consortium for Anorexia Nervosa of the Wellcome Trust Case Control Consortium 38, Laramie Duncan1,2,3, John R.B. Perry7, Nick Patterson1, Elise B. Robinson1,2,3, Mark J. Daly1,2,3, Alkes L. Price1,5,6,**, and Benjamin M. -
The BRCA1 Tumor Suppressor
Journal of Translational Science Review Article ISSN: 2059-268X The BRCA1 tumor suppressor: potential long-range interactions of the BRCA1 promoter and the risk of breast cancer Beata Anna Bielinska* Department of Molecular and Translational Oncology, Maria Sklodowska-Curie Memorial Cancer Center and Institute of Oncology, Poland Abstract Breast cancer is a complex disease with different phenotypes associated with genetic and non-genetic risk factors. An aberrant expression of the BRCA1 tumor suppressor as well as dysfunction of BRCA1 protein caused by germline mutations are implicated in breast cancer aethiology. BRCA1 plays a crucial role in genome and epigenome stability. Its expression is auto regulated and modulated by various cellular signals including metabolic status, hypoxia, DNA damage, estrogen stimulation. The review describes breast cancer risk factors, the BRCA1 gene expression and functions as well as covers the role of long-range genomic interactions, which emerge as regulators of gene expression and moderators of genomic communication. The potential long-range interactions of the BRCA1 promoter (driven by polymorphic variant rs11655505 C/T, as an example) and their possible impact on the BRCA1 gene regulation and breast cancer risk are also discussed. Introduction efficiency of BRCA1 transcription [9]. However, to date the mechanism underlying effect of the BRCA1 promoter variant rs11655505 C>T Female breast cancer is one of the most common cancers worldwide remains unknown. with app.1.68 million cases diagnosed annually [1]. It is a complex disease characterized by molecular and phenotypic heterogeneity Besides high risk BRCA1/BRCA2 mutations, moderate risk observed both within populations and intra-individually, within mutations such as those found in DNA repair genes (CHEK2, ATM, single tumor cells in a spatiotemporal manner, as pointed out by PALB2) also demonstrate familial clustering. -
Within-Sibship GWAS Improve Estimates of Direct Genetic Effects
bioRxiv preprint doi: https://doi.org/10.1101/2021.03.05.433935; this version posted March 7, 2021. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY 4.0 International license. Within-sibship GWAS improve estimates of direct genetic effects Laurence J Howe1,2 *, Michel G Nivard3, Tim T Morris1,2, Ailin F Hansen4, Humaira Rasheed4, Yoonsu Cho1,2, Geetha Chittoor5, Penelope A Lind6,7,8, Teemu Palviainen9, Matthijs D van der Zee3, Rosa Cheesman10,11, Massimo Mangino12,13, Yunzhang Wang14, Shuai Li15,16,17, Lucija Klaric18, Scott M Ratliff19, Lawrence F Bielak19, Marianne Nygaard20,21, Chandra A Reynolds22, Jared V Balbona23,24, Christopher R Bauer25,26, Dorret I Boomsma3,27, Aris Baras28, Archie Campbell29, Harry Campbell30, Zhengming Chen31,32, Paraskevi Christofidou12, Christina C Dahm33, Deepika R Dokuru23,24, Luke M Evans24,34, Eco JC de Geus3,35, Sudheer Giddaluru36,37, Scott D Gordon38, K. Paige Harden39, Alexandra Havdahl40,41, W. David Hill42,43, Shona M Kerr18, Yongkang Kim24, Hyeokmoon Kweon44, Antti Latvala9,45, Liming Li46, Kuang Lin31, Pekka Martikainen47,48,49, Patrik KE Magnusson14, Melinda C Mills50, Deborah A Lawlor1,2,51, John D Overton27, Nancy L Pedersen14, David J Porteous25, Jeffrey Reid28, Karri Silventoinen47, Melissa C Southey17,52,53, Travis T Mallard39, Elliot M Tucker-Drob39, Margaret J Wright54, Social Science Genetic Association Consortium, Within Family -
Heritability Estimates and Genetic Correlation for Growth Traits and LCDV Susceptibility in Gilthead Sea Bream (Sparus Aurata)
fishes Article Heritability Estimates and Genetic Correlation for Growth Traits and LCDV Susceptibility in Gilthead Sea Bream (Sparus aurata) Carlos Carballo 1,2, Hyun Suk Shin 3, Concepción Berbel 1, Maria Jesús Zamorano 3, Juan Jose Borrego 2 , Eva Armero 4, Juan Manuel Afonso 3 and Manuel Manchado 1,5,* 1 IFAPA Centro El Toruño, Junta de Andalucía, Camino Tiro Pichón s/n, 11500 El Puerto de Santa María, Cádiz, Spain; [email protected] (C.C.); [email protected] (C.B.) 2 Departamento de Microbiología, Campus de teatinos, Universidad de Málaga, 29071 Málaga, Spain; [email protected] 3 Aquaculture Research Group (GIA), IU-ECOAQUA, Universidad de Las Palmas de Gran Canaria, Crta. Taliarte s/n, 35214 Telde, Spain; [email protected] (H.S.S.); [email protected] (M.J.Z.); [email protected] (J.M.A.) 4 Animal Production group, Universidad Politecnica de Cartagena, Paseo Alfonso XIII, 48, 30203 Cartagena, Spain; [email protected] 5 “Crecimiento Azul”, Centro IFAPA El Toruño, Unidad Asociada al CSIC”, 11500 El Puerto de Santa María, Cádiz, Spain * Correspondence: [email protected]; Tel.: +34-671-532-088 Received: 26 October 2019; Accepted: 19 December 2019; Published: 25 December 2019 Abstract: The lymphocystis disease (LCD) is a viral infection with a high economic impact in gilthead sea bream aquaculture. In this study, genetic estimates associated with lymphocystis disease virus (LCDV) disease susceptibility and growth were determined in sea bream juveniles. Two fish batches (named batch 1 and batch 2) were built from mass spawning and reared under industrial conditions until disease outbreak. -
EMILY RAUSCHER University of Kansas Phone: 785-864-9403 Department of Sociology Fax: 785-864-5280 Fraser Hall, Room 735 [email protected] 1415 Jayhawk Blvd
EMILY RAUSCHER University of Kansas Phone: 785-864-9403 Department of Sociology Fax: 785-864-5280 Fraser Hall, Room 735 [email protected] 1415 Jayhawk Blvd. http://people.ku.edu/~e178r088/ Lawrence, KS 66045 EDUCATION PhD New York University, Department of Sociology 2012 MPhil University of Dublin, Trinity College, Ireland, Ethnic and Racial Studies 2005 MS University of Southern California, Rossier School of Education 2004 BA Wesleyan University, East Asian Studies 1999 Rotary Exchange Student, Niikawa High School, Uozu, Japan 1995 ACADEMIC POSITION Assistant Professor, Department of Sociology, University of Kansas 2012–Present Faculty Director, Wealth Transfer Program, Center on Assets, Education, and Inclusion, University of Kansas 2014–Present PEER-REVIEWED PUBLICATIONS Friedline, Terri, Emily Rauscher, Stacia West, Barbara Phipps, Nadzeya Kardash, Karin Chang, and Meghan Ecker-Lyster. Forthcoming. “‘They Will Go Like I Did’: How Parents Think about College for Their Young Children in the Context of Rising Costs.” Children and Youth Services Review. Rauscher, Emily. 2017. “Marriage Delayed and Equalized: Effects of Early U.S. Compulsory Schooling Laws on Marital Patterns by Race.” The Sociological Quarterly 58(3):447-469. Rauscher, Emily. 2017. “Plastic and Immobile: Unequal Intergenerational Transmission by Genotype within Sibling Pairs.” Social Science Research 65: 112-129. – Media coverage: KCUR National Public Radio; Boston Globe; Science Daily; Genetic Engineering and Biotechnology News; Phys.org Rauscher, Emily, William Elliott, Megan O’Brien, Jason Callahan, and Joe Steensma. 2017. “Examining the Relationship between Parental Educational Expectations and a Community-Based Children’s Savings Account Program.” Children and Youth Services Review 74: 96-107. Rauscher, Emily. 2016. -
LDL Polygenic Risk Scores in Practice
University of Copenhagen & Copenhagen University Hospital LDL polygenic risk scores in practice Anne Tybjærg-Hansen MD DMSc Professor, Chief Physician Copenhagen University Hospital and Faculty of Health and Medical Sciences, University of Copenhagen, Denmark FH Global Summit, Atlanta 211019 Outline • Introduction to polygenic risk score • Polygenic risk scores for LDL cholesterol and FH • Polygenic risk scores for CAD and FH – polygenic versus omnigenic scores • Take home message Introduction to polygenic risk score Genome-wide association study of LDL cholesterol (from GLGC) P<10-8 Willer CJ et al. Nat Genet 2013 Creating a polygenic score GWAS SNPs Individually: tiny effects ComBined: larger effect Effect of gene score on trait level 1.0 1.2 Odds ratio Genome-wide association study of LDL cholesterol Polygenic risk score P<10-8 Willer CJ et al. Nat Genet 2013 Genome-wide association studies (GWAS’) for lipids In sufficiently large samples, many ~ 100,000 previously non-significant loci would European ancestry become nominally significant, 95 loci although effect sizes are close to zero. ~ 600,000 ~85,000 non-Europeans ~200,000 >118 novel loci 7,898 non-Europeans (~268 known loci) 62 novel loci 30.4 mill SNPs Klarin et al. 2010 2013 2018 Polygenic risk scores for LDL cholesterol and Familial Hypercholesterolemia Rigshospitalet The Centre of Diagnostic Investigations Diagnostic criteria for FH 1/220 individuals • Definite FH: > 8 points • Probable FH: 6-8 points • Possible FH: 3-5 points • Unlikely FH: 0-2 points Mette Christoffersen 9 Rigshospitalet The Centre of Diagnostic Investigations Clinical vs. mutation diagnosis Polygenic cause? 20-40% High Lp(a)? 60-80 % Polygenic cause? Modified from Eur Heart J.