Identification of Scale Worms in British and Irish Waters
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Bristol Bay, Alaska
EPA 910-R-14-001C | January 2014 An Assessment of Potential Mining Impacts on Salmon Ecosystems of Bristol Bay, Alaska Volume 3 – Appendices E-J Region 10, Seattle, WA www.epa.gov/bristolbay EPA 910-R-14-001C January 2014 AN ASSESSMENT OF POTENTIAL MINING IMPACTS ON SALMON ECOSYSTEMS OF BRISTOL BAY, ALASKA VOLUME 3—APPENDICES E-J U.S. Environmental Protection Agency Region 10 Seattle, WA CONTENTS VOLUME 1 An Assessment of Potential Mining Impacts on Salmon Ecosystems of Bristol Bay, Alaska VOLUME 2 APPENDIX A: Fishery Resources of the Bristol Bay Region APPENDIX B: Non-Salmon Freshwater Fishes of the Nushagak and Kvichak River Drainages APPENDIX C: Wildlife Resources of the Nushagak and Kvichak River Watersheds, Alaska APPENDIX D: Traditional Ecological Knowledge and Characterization of the Indigenous Cultures of the Nushagak and Kvichak Watersheds, Alaska VOLUME 3 APPENDIX E: Bristol Bay Wild Salmon Ecosystem: Baseline Levels of Economic Activity and Values APPENDIX F: Biological Characterization: Bristol Bay Marine Estuarine Processes, Fish, and Marine Mammal Assemblages APPENDIX G: Foreseeable Environmental Impact of Potential Road and Pipeline Development on Water Quality and Freshwater Fishery Resources of Bristol Bay, Alaska APPENDIX H: Geologic and Environmental Characteristics of Porphyry Copper Deposits with Emphasis on Potential Future Development in the Bristol Bay Watershed, Alaska APPENDIX I: Conventional Water Quality Mitigation Practices for Mine Design, Construction, Operation, and Closure APPENDIX J: Compensatory Mitigation and Large-Scale Hardrock Mining in the Bristol Bay Watershed AN ASSESSMENT OF POTENTIAL MINING IMPACTS ON SALMON ECOSYSTEMS OF BRISTOL BAY, ALASKA VOLUME 3—APPENDICES E-J Appendix E: Bristol Bay Wild Salmon Ecosystem: Baseline Levels of Economic Activity and Values Bristol Bay Wild Salmon Ecosystem Baseline Levels of Economic Activity and Values John Duffield Chris Neher David Patterson Bioeconomics, Inc. -
Morphological Investigation and Analysis of Ribosomal DNA Phylogeny of Two Scale-Worms (Polychaeta, Polynoidae) from the Gulf of Thailand
Songklanakarin J. Sci. Technol. 40 (5), 1158-1166, Sep. - Oct. 2018 Original Article Morphological investigation and analysis of ribosomal DNA phylogeny of two scale-worms (Polychaeta, Polynoidae) from the Gulf of Thailand Arin Ngamniyom1*, Rakchanok Koto2, Weerawich Wongroj3, Thayat Sriyapai1, Pichapack Sriyapai4, and Busaba Panyarachun5 1 Faculty of Environmental Culture and Eco-tourism, Srinakharinwirot University, Watthana, Bangkok, 10110 Thailand 2 Department of Biology, Faculty of Sciences, Srinakharinwirot University, Watthana, Bangkok, 10110 Thailand 3 Prasarnmit Elementary Demonstration School, Srinakharinwirot University, Watthana, Bangkok, 10110 Thailand 4 Department of Microbiology, Faculty of Sciences, Srinakharinwirot University, Watthana, Bangkok, 10110 Thailand 5 Department of Anatomy, Faculty of Medicine, Srinakharinwirot University, Watthana, Bangkok, 10110 Thailand Received: 14 December 2016; Revised: 7 June 2017; Accepted: 5 July 2017 Abstract Scale-worms are polychaetes of the family Polynoidae that are commonly distribute in marine environments. This study aims identify and introduce two scale-worms as Capitulatinoe cf. cupisetis and Eunoe cf. oerstedi from the western coast of the Gulf of Thailand. Using scanning electron microscopy of adult worms, the antennae, palps, prostomium, cirri, setigers, parapodia, saetae and elytra are described. In addition, the phylogenetic relationships of our specimens with other polychaete species were analyzed based on partial sequences of 28S, 18S and 16S ribosomal DNA (rDNA) genes. The rDNA sequences identified C. cf. cupisetis and E. cf. oerstedi were respectively recovered within Arctonoinae and Polynoinae in a monophyletic Polynoidae. The congruence or incongruence of the morphological and molecular data is discussed in the text. These findings increase the knowledge of polynoid polychaete worms in Thailand, although two scale-worms remain to be identified of the precise species. -
Phylogeny and Biogeography of Branchipolynoe
Phylogeny and Biogeography of Branchipolynoe (Polynoidae, Phyllodocida, Aciculata, Annelida), with Descriptions of Five New Species from Methane Seeps and Hydrothermal Vents Johanna Lindgren, Avery Hatch, Stéphane Hourdez, Charlotte Seid, Greg Rouse To cite this version: Johanna Lindgren, Avery Hatch, Stéphane Hourdez, Charlotte Seid, Greg Rouse. Phylogeny and Biogeography of Branchipolynoe (Polynoidae, Phyllodocida, Aciculata, Annelida), with Descriptions of Five New Species from Methane Seeps and Hydrothermal Vents. Diversity, MDPI, 2019, 11 (9), pp.153. 10.3390/d11090153. hal-02313505 HAL Id: hal-02313505 https://hal.sorbonne-universite.fr/hal-02313505 Submitted on 11 Oct 2019 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. diversity Article Phylogeny and Biogeography of Branchipolynoe (Polynoidae, Phyllodocida, Aciculata, Annelida), with Descriptions of Five New Species from Methane Seeps and Hydrothermal Vents Johanna Lindgren 1, Avery S. Hatch 1, Stephané Hourdez 2, Charlotte A. Seid 1 and Greg W. Rouse 1,* 1 Scripps Institution of Oceanography, -
Supplementary Tales
Metabarcoding reveals different zooplankton communities in northern and southern areas of the North Sea Jan Niklas Macher, Berry B. van der Hoorn, Katja T. C. A. Peijnenburg, Lodewijk van Walraven, Willem Renema Supplementary tables 1-5 Table S1: Sampling stations and recorded abiotic variables recorded during the NICO 10 expedition from the Dutch Coast to the Shetland Islands Sampling site name Coordinates (°N, °E) Mean remperature (°C) Mean salinity (PSU) Depth (m) S74 59.416510, 0.499900 8.2 35.1 134 S37 58.1855556, 0.5016667 8.7 35.1 89 S93 57.36046, 0.57784 7.8 34.8 84 S22 56.5866667, 0.6905556 8.3 34.9 220 S109 56.06489, 1.59652 8.7 35 79 S130 55.62157, 2.38651 7.8 34.8 73 S156 54.88581, 3.69192 8.3 34.6 41 S176 54.41489, 4.04154 9.6 34.6 43 S203 53.76851, 4.76715 11.8 34.5 34 Table S2: Species list and read number per sampling site Class Order Family Genus Species S22 S37 S74 S93 S109 S130 S156 S176 S203 Copepoda Calanoida Acartiidae Acartia Acartia clausi 0 0 0 72 0 170 15 630 3995 Copepoda Calanoida Acartiidae Acartia Acartia tonsa 0 0 0 0 0 0 0 0 23 Hydrozoa Trachymedusae Rhopalonematidae Aglantha Aglantha digitale 0 0 0 0 1870 117 420 629 0 Actinopterygii Trachiniformes Ammodytidae Ammodytes Ammodytes marinus 0 0 0 0 0 263 0 35 0 Copepoda Harpacticoida Miraciidae Amphiascopsis Amphiascopsis cinctus 344 0 0 992 2477 2500 9574 8947 0 Ophiuroidea Amphilepidida Amphiuridae Amphiura Amphiura filiformis 0 0 0 0 219 0 0 1470 63233 Copepoda Calanoida Pontellidae Anomalocera Anomalocera patersoni 0 0 586 0 0 0 0 0 0 Bivalvia Venerida -
Reproductive Attributes of Polynoid Polychaetes from Hydrothermal Vents on the East Pacific Rise
W&M ScholarWorks Dissertations, Theses, and Masters Projects Theses, Dissertations, & Master Projects 2005 Reproductive Attributes of Polynoid Polychaetes from Hydrothermal Vents on the East Pacific Rise Jessica Lynn Wallace College of William & Mary - Arts & Sciences Follow this and additional works at: https://scholarworks.wm.edu/etd Part of the Marine Biology Commons, and the Oceanography Commons Recommended Citation Wallace, Jessica Lynn, "Reproductive Attributes of Polynoid Polychaetes from Hydrothermal Vents on the East Pacific Rise" (2005). Dissertations, Theses, and Masters Projects. Paper 1539626835. https://dx.doi.org/doi:10.21220/s2-zy51-8j97 This Thesis is brought to you for free and open access by the Theses, Dissertations, & Master Projects at W&M ScholarWorks. It has been accepted for inclusion in Dissertations, Theses, and Masters Projects by an authorized administrator of W&M ScholarWorks. For more information, please contact [email protected]. REPRODUCTIVE ATTRIBUTES OF POLYNOID POLYCHAETES FROM HYDROTHERMAL VENTS ON THE EAST PACIFIC RISE A Thesis Presented to The Faculty of the Department of Biology The College of William and Mary in Virginia In Partial Fulfillment Of the Requirements for the Degree of Master of Science by Jessica Lynn Wallace 2005 APPROVAL SHEET This thesis is submitted in partial fulfillment of the requirements for the degree of Master of Science Jessica L. Wallace Approved by the Committee, August 2005 Dr. Cindy Lee Van Dover, Chair Dr. Paul D. Heideman Dr. Joseph L. Scott To Dad and Ken for inspiring my love of oceanography To Mom and Stephen for their unending love and support TABLE OF CONTENTS Page Acknowledgements v List of Figures vi Abstract vii Introduction 2 Chapter I. -
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Vol. 82, pp. 1-30 29 May, 1969 PROCEEDINGS OF THE BIOLOGICAL SOCIETY OF WASHINGTON REVIEW OF SOME SPECIES REFERRED TO SCALISETOSUS MCINTOSH (POLYCHAETA, POLYNOIDAE) BY MABIAN H. PETTIBONE Smithsonian Institution, Washington, D. C. In connection with an extended review of the polynoid gen- era, based on a study of the type-species, it was foimd that Scalisetosus Mclntosh ( 1885) has been used for a heterogenous group of species. The genus has served to include species with setae as transparent as crystal and the neurosetae character- ized by the presence of a basal semilunar cusp or pocket, al- though this particular feature was not shown on the figure of the neiu-osetae of the type-species, S. ceramensis, by Mclntosh (1885, pi. lOA, fig. 14). Any species equipped with this pe- culiar type of neiu-osetae has been placed in Scalisetosus, re- gardless of other characters. Saint-Joseph (1899) proposed the new genus Adyte for three species {Polynoe pellucida Ehlers, Hermadion assimile Mclntosh, and H. echini Giard) having the peculiar type of neurosetae, separating them from S. cera- mensis, which lacks the basal semilunar cusps. Mclntosh (1900) was responsible for changing the diagnosis of Scali- setosus to include the species referred to Adyte by Saint- Joseph, Subsequently, Adyte was abandoned and was synony- mized with Scalisetosus by Fauvel (1914, p. 47). During a visit to the British Museum of Natural History in May 1967, I was able to examine the unique type of Scalise- tosus ceramensis and to verify that the neurosetae indeed do lack the basal semilunar cusps and that the species therefore lacks one of the key characters that has been attributed to the genus. -
(Polychaeta) from the CANARY ISLANDS
BULLETIN OF MARINE SCIENCE, 48(2): l8D-188, 1991 POL YNOIDAE (pOLYCHAETA) FROM THE CANARY ISLANDS M. C. Brito, J. Nunez and J. J. Bacallado ABSTRACT This paper is a contribution to the study of the family Polynoidae (Polychaeta) from the Canary Islands. The material examined has been collected by the authors from 1975 to 1989. A total of 18 species was found belonging to 8 genera: Gesiel/a (I), Po/ynoe (1), Adyte (I), Subadyte (I), Harrnothoe (11), A/entia (1), Lepidasthenia (1) and Lepidonotus (I). Ten species are new to this fauna and one, Harrnothoe cascabullico/a, is new to science. Furthermore, the genera Po/ynoe, Adyte and Lepidasthenia are recorded for the first time in the Canary Islands. The Polychaeta of the Canary Islands are enumerated in the provisional cata- logue of Nunez et al. (1984), in which are recorded 148 species, 12 of which belong to the family Polynoidae. Samples from the Canary coastline were examined and members ofPolynoidae studied. A total of 173 specimens was studied, belonging to 7 subfamilies, 8 genera, and 18 species, of which 9 species are recorded for the first time in the Canarian fauna. Worthy of note is the large number of species belonging to the genus Harmothoe (11), one of which, H. cascabullicola is new. METHODS The material examined was collected from 1975 to 1989, from 61 stations, at 45 localities on the Canary coasts (Fig. I). The list of stations, with their localities, types of substrate and collecting data are listed in Table I. The methods used in collecting depended on the type of substrate. -
Comparative Composition, Diversity and Trophic Ecology of Sediment Macrofauna at Vents, Seeps and Organic Falls
Review Comparative Composition, Diversity and Trophic Ecology of Sediment Macrofauna at Vents, Seeps and Organic Falls Angelo F. Bernardino1*, Lisa A. Levin2, Andrew R. Thurber3, Craig R. Smith4 1 Departamento de Oceanografia e Ecologia, Universidade Federal do Espı´rito Santo, Goiabeiras, Vito´ ria, Esp´ı rito Santo, Brazil, 2 Center for Marine Biodiversity and Conservation; Integrative Oceanography Division, Scripps Institution of Oceanography, La Jolla, California, United States of America,3 College of Earth, Ocean, and Atmospheric Sciences, Oregon State University, Corvallis, Oregon, United States of America,4 Department of Oceanography, School of Ocean and Earth Science and Technology, University of Hawaii, Honolulu, Hawaii, United States of America communities. Sulfide is toxic to most metazoan taxa [1,2], Abstract: Sediments associated with hydrothermal vent- although some sediment-dwelling taxa have adapted to conditions ing, methane seepage and large organic falls such as of low oxygen and appear capable of tolerating the presence of whale, wood and plant detritus create deep-sea networks sulfide. Due to high local production, metazoans in reducing of soft-sediment habitats fueled, at least in part, by the sediments in the deep sea are often released from the extreme food oxidation of reduced chemicals. Biological studies at limitation prevalent in the background community (e.g. [3]). deep-sea vents, seeps and organic falls have looked at Instead, chemical toxicity may drive infaunal community macrofaunal taxa, but there has yet to be a systematic comparison of the community-level attributes of sedi- structure. In this meta-analysis we ask which taxa are common ment macrobenthos in various reducing ecosystems. -
A Bioturbation Classification of European Marine Infaunal
A bioturbation classification of European marine infaunal invertebrates Ana M. Queiros 1, Silvana N. R. Birchenough2, Julie Bremner2, Jasmin A. Godbold3, Ruth E. Parker2, Alicia Romero-Ramirez4, Henning Reiss5,6, Martin Solan3, Paul J. Somerfield1, Carl Van Colen7, Gert Van Hoey8 & Stephen Widdicombe1 1Plymouth Marine Laboratory, Prospect Place, The Hoe, Plymouth, PL1 3DH, U.K. 2The Centre for Environment, Fisheries and Aquaculture Science, Pakefield Road, Lowestoft, NR33 OHT, U.K. 3Department of Ocean and Earth Science, National Oceanography Centre, University of Southampton, Waterfront Campus, European Way, Southampton SO14 3ZH, U.K. 4EPOC – UMR5805, Universite Bordeaux 1- CNRS, Station Marine d’Arcachon, 2 Rue du Professeur Jolyet, Arcachon 33120, France 5Faculty of Biosciences and Aquaculture, University of Nordland, Postboks 1490, Bodø 8049, Norway 6Department for Marine Research, Senckenberg Gesellschaft fu¨ r Naturforschung, Su¨ dstrand 40, Wilhelmshaven 26382, Germany 7Marine Biology Research Group, Ghent University, Krijgslaan 281/S8, Ghent 9000, Belgium 8Bio-Environmental Research Group, Institute for Agriculture and Fisheries Research (ILVO-Fisheries), Ankerstraat 1, Ostend 8400, Belgium Keywords Abstract Biodiversity, biogeochemical, ecosystem function, functional group, good Bioturbation, the biogenic modification of sediments through particle rework- environmental status, Marine Strategy ing and burrow ventilation, is a key mediator of many important geochemical Framework Directive, process, trait. processes in marine systems. In situ quantification of bioturbation can be achieved in a myriad of ways, requiring expert knowledge, technology, and Correspondence resources not always available, and not feasible in some settings. Where dedi- Ana M. Queiros, Plymouth Marine cated research programmes do not exist, a practical alternative is the adoption Laboratory, Prospect Place, The Hoe, Plymouth PL1 3DH, U.K. -
Polychaeta: Polynoidae) and Revision of Iphione Cimex Quatrefages, Gattyana Deludens Fauvel, and Harmothoe Iphionelloides Johnson (Harmothoinae
Review of the Iphioninae (Polychaeta: Polynoidae) and Revision of Iphione cimex Quatrefages, Gattyana deludens Fauvel, and Harmothoe iphionelloides Johnson (Harmothoinae) MARIAN H. PETTIBONE SMITHSONIAN CONTRIBUTIONS TO ZOOLOGY • NUMBER 428 SERIES PUBLICATIONS OF THE SMITHSONIAN INSTITUTION Emphasis upon publication as a means of "diffusing knowledge" was expressed by the first Secretary of the Smithsonian. In his formal plan for the Institution, Joseph Henry outlined a program that included the following statement: "It is proposed to publish a series of reports, giving an account of the new discoveries in science, and of the changes made from year to year in all branches of knowledge." This theme of basic research has been adhered to through the years by thousands of titles issued in series publications under the Smithsonian imprint, commencing with Smithsonian Contributions to Knowledge in 1848 and continuing with the following active series: Smithsonian Contributions to Anthropology Smithsonian Contributions to Astrophysics Smithsonian Contributions to Botany Smithsonian Contributions to the Earth Sciences Smithsonian Contributions to the Marine Sciences Smithsonian Contributions to Paleobiology Smithsonian Contributions to Zoology Smithsonian Folklife Studies Smithsonian Studies in Air and Space Smithsonian Studies in History and Technology In these series, the Institution publishes small papers and full-scale monographs that report the research and collections of its various museums and bureaux or of professional colleagues in the world of science and scholarship. The publications are distributed by mailing lists to libraries, universities, and similar institutions throughout the world. Papers or monographs submitted for series publication are received by the Smithsonian Institution Press, subject to its own review for format and style, only through departments of the various Smithsonian museums or bureaux, where the manuscripts are given substantive review. -
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Memoirs of Museum Victoria 71: 217–236 (2014) Published December 2014 ISSN 1447-2546 (Print) 1447-2554 (On-line) http://museumvictoria.com.au/about/books-and-journals/journals/memoirs-of-museum-victoria/ Original specimens and type localities of early described polychaete species (Annelida) from Norway, with particular attention to species described by O.F. Müller and M. Sars EIVIND OUG1,* (http://zoobank.org/urn:lsid:zoobank.org:author:EF42540F-7A9E-486F-96B7-FCE9F94DC54A), TORKILD BAKKEN2 (http://zoobank.org/urn:lsid:zoobank.org:author:FA79392C-048E-4421-BFF8-71A7D58A54C7) AND JON ANDERS KONGSRUD3 (http://zoobank.org/urn:lsid:zoobank.org:author:4AF3F49E-9406-4387-B282-73FA5982029E) 1 Norwegian Institute for Water Research, Region South, Jon Lilletuns vei 3, NO-4879 Grimstad, Norway ([email protected]) 2 Norwegian University of Science and Technology, University Museum, NO-7491 Trondheim, Norway ([email protected]) 3 University Museum of Bergen, University of Bergen, PO Box 7800, NO-5020 Bergen, Norway ([email protected]) * To whom correspondence and reprint requests should be addressed. E-mail: [email protected] Abstract Oug, E., Bakken, T. and Kongsrud, J.A. 2014. Original specimens and type localities of early described polychaete species (Annelida) from Norway, with particular attention to species described by O.F. Müller and M. Sars. Memoirs of Museum Victoria 71: 217–236. Early descriptions of species from Norwegian waters are reviewed, with a focus on the basic requirements for re- assessing their characteristics, in particular, by clarifying the status of the original material and locating sampling sites. A large number of polychaete species from the North Atlantic were described in the early period of zoological studies in the 18th and 19th centuries. -
Halosydna Brevisetosa Class: Polychaeta, Errantia
Phylum: Annelida Halosydna brevisetosa Class: Polychaeta, Errantia Order: Phyllodocida, Aphroditiformia Family: Polynoidae, Lepitonotinae Taxonomy: Eastern Pacific polynoids are Trunk: often reported with wide distributions result- Posterior: Posterior three segments ing in numerous synonymies. Although oth- with dorsal cirri. Pygidium bears one pair of er synonyms are reported, the most com- anal cirri and anus is dorsal and between seg- mon and recent for H. brevisetosa is H. ments 35–36 (Salazar-Silva 2013). johnsoni. These two species have Parapodia: Biramous. Notopodia smaller overlapping ranges centrally, but the range than neuropodia (Fig. 3). Neuropodia with of H. brevisetosa extends more northerly rounded lobe near tip of acicula. Dorsal cirri into colder waters while H. johnsoni is more expanded distally with filiform tip and ventral common in warmer, southern regions. The cirri are short, with fine tip (Salazar-Silva variation in setal morphology between them 2013). was once believed to be temperature- Setae (chaetae): All setae simple. Notosetae induced and they were synonymized short and serrate. Neorsetae falcate, with (Gaffney 1973). However, after analyzing rows of spines toward the tips, which are en- type material from both species, Salazar- tire. Neurosetae more abundant than notose- Silva (2013) determined that the two are tae (Fig. 3) (Salazar-Silva 2013). different species based on the morphology Eyes/Eyespots: Two pairs of eyes present at of neurosetae and re-described them. posterior prostomium (Fig. 2). Anterior Appendages: Three anterior anten- Description nae (Fig. 2) and two palps (Halosynda, Sala- Size: Average size range is 40 to 100 mm in zar-Silva 2013). length (Hartman 1968).