Surface Associated Amoebae on the Ctenophore, Mnemiopsis Sp
Total Page:16
File Type:pdf, Size:1020Kb
Load more
Recommended publications
-
Zooplankton Species", Takes You Directly to the Species Cards, Which Hypercard Taxonomy Contain the Pictures and Description of Each Species in the Key
Fisken Hav. , 198 9 ( 1) : 1- 13 + App . Creating and Using Taxonomic Keys with HyperCard Kenneth W. Estep Institute of Marine Research, Postbox 1870,5024 Bergen, Norway The preparation and use of taxonomic keys is an essential part of the work of many biologists. However, the difficulty of collecting taxonomic information that is often dispersed in many hard-to-use and difficult-to-find references discourages the common use of taxonomy in the work of many ecologists. This manuscript describes the computer program Linnaeus, which was designed to solve this problem. Linnaeus was developed at the Institute of Marine Research in Bergen using the Macintosh computer and will include much more complicated examples of HyperCard l l programming. l To use the example key, copy the files from the Linnaeus disk to your i i hard-disk drive and click on the file "Read Me First." This file has l mmplete instructions on the installation into your HyperCard Home stack. If you wish, you can print a copy of the instructions by choosing the "Print Instructions" button. b inn is After you have installed Linnaeus, you can move to the program from your HyperCard Home card by clicking on the Linnaeus Linnaeus button on your Home card. 1 This will bring you to the Index card for Linnaeus. About Linnaeus I Use the Zooplankton j i i Set User Hode i Identlffcatlon key.- i ZooplanktonKey i i ......" ......... " ... ......-.... ",.." ......... " ,......,. ",,.,".......*.~.........".........".....*..."............... "..."...."...-....".: i...... " ....................................... " ......... ".... " ......... "................................................... - .... "..." ....".. I i - - i "se the Zooplankton i -- I i Species List Reference~ i ..% ,p species list. , f ZooplanktonSpeoies i i ................." ......... "......... ".... " ........................................................................ ".... -...m .... -...m ....-. -
Protistology Mitochondrial Genomes of Amoebozoa
Protistology 13 (4), 179–191 (2019) Protistology Mitochondrial genomes of Amoebozoa Natalya Bondarenko1, Alexey Smirnov1, Elena Nassonova1,2, Anna Glotova1,2 and Anna Maria Fiore-Donno3 1 Department of Invertebrate Zoology, Faculty of Biology, Saint Petersburg State University, 199034 Saint Petersburg, Russia 2 Laboratory of Cytology of Unicellular Organisms, Institute of Cytology RAS, 194064 Saint Petersburg, Russia 3 University of Cologne, Institute of Zoology, Terrestrial Ecology, 50674 Cologne, Germany | Submitted November 28, 2019 | Accepted December 10, 2019 | Summary In this mini-review, we summarize the current knowledge on mitochondrial genomes of Amoebozoa. Amoebozoa is a major, early-diverging lineage of eukaryotes, containing at least 2,400 species. At present, 32 mitochondrial genomes belonging to 18 amoebozoan species are publicly available. A dearth of information is particularly obvious for two major amoebozoan clades, Variosea and Tubulinea, with just one mitochondrial genome sequenced for each. The main focus of this review is to summarize features such as mitochondrial gene content, mitochondrial genome size variation, and presence or absence of RNA editing, showing if they are unique or shared among amoebozoan lineages. In addition, we underline the potential of mitochondrial genomes for multigene phylogenetic reconstruction in Amoebozoa, where the relationships among lineages are not fully resolved yet. With the increasing application of next-generation sequencing techniques and reliable protocols, we advocate mitochondrial -
Ctenophore Relationships and Their Placement As the Sister Group to All Other Animals
ARTICLES DOI: 10.1038/s41559-017-0331-3 Ctenophore relationships and their placement as the sister group to all other animals Nathan V. Whelan 1,2*, Kevin M. Kocot3, Tatiana P. Moroz4, Krishanu Mukherjee4, Peter Williams4, Gustav Paulay5, Leonid L. Moroz 4,6* and Kenneth M. Halanych 1* Ctenophora, comprising approximately 200 described species, is an important lineage for understanding metazoan evolution and is of great ecological and economic importance. Ctenophore diversity includes species with unique colloblasts used for prey capture, smooth and striated muscles, benthic and pelagic lifestyles, and locomotion with ciliated paddles or muscular propul- sion. However, the ancestral states of traits are debated and relationships among many lineages are unresolved. Here, using 27 newly sequenced ctenophore transcriptomes, publicly available data and methods to control systematic error, we establish the placement of Ctenophora as the sister group to all other animals and refine the phylogenetic relationships within ctenophores. Molecular clock analyses suggest modern ctenophore diversity originated approximately 350 million years ago ± 88 million years, conflicting with previous hypotheses, which suggest it originated approximately 65 million years ago. We recover Euplokamis dunlapae—a species with striated muscles—as the sister lineage to other sampled ctenophores. Ancestral state reconstruction shows that the most recent common ancestor of extant ctenophores was pelagic, possessed tentacles, was bio- luminescent and did not have separate sexes. Our results imply at least two transitions from a pelagic to benthic lifestyle within Ctenophora, suggesting that such transitions were more common in animal diversification than previously thought. tenophores, or comb jellies, have successfully colonized from species across most of the known phylogenetic diversity of nearly every marine environment and can be key species in Ctenophora. -
NEW RECORD of PLEUROBRACHIA PILEUS (O. F. MÜLLER, 1776) (CTENOPHORA, CYDIPPIDA) from CORAL REEF, IRAQI MARINE WATERS Hanaa
Mohammed and Ali Bull. Iraq nat. Hist. Mus. (2020) 16 (1): 83- 93. https://doi.org/10.26842/binhm.7.2020.16.1.0083 NEW RECORD OF PLEUROBRACHIA PILEUS (O. F. MÜLLER, 1776) (CTENOPHORA, CYDIPPIDA) FROM CORAL REEF, IRAQI MARINE WATERS Hanaa Hussein Mohammed* and Malik Hassan Ali** *Department Biological Development of Shatt Al-Arab and N W Arabian Gulf, Marine Science Center, University of Basrah, Basrah, Iraq **Department Marine Biology, Marine Science Center, University of Basrah, Basrah, Iraq **Corresponding author: [email protected] Received Date: 16 January 2020, Accepted Date: 27April 2020, Published Date: 24 June 2020 ABSTRACT The aim of this paper is to present the first record of ctenophore species Pleurobrachia pileus (O. F. Müller, 1776) in the coral reef as was recently found in Iraqi marine waters. The specimens were collected from two sites, the first was in Khor Abdullah during May 2015, and the second site was located in the pelagic water of the coral reef area, near the Al-Basrah deep sea crude oil marine loading terminal. Three samples were collected at this site during May 2015, February and March 2018 which showed that P. pileus were present at a densities of 3.0, 2.2 and 0.55 ind./ m3 respectively. The species can affect on the abundance of other zooplankton community through predation. The results of examining the stomach contents revealed that they are important zooplanktivorous species; their diets comprised large number of zooplankton as well as egg and fish larvae. The calanoid copepods formed the highest percentage of the diet, reaching 47%, followed by cyclopoid copepods 30%, and then the fish larvae formed 20% of the diet. -
Old Woman Creek National Estuarine Research Reserve Management Plan 2011-2016
Old Woman Creek National Estuarine Research Reserve Management Plan 2011-2016 April 1981 Revised, May 1982 2nd revision, April 1983 3rd revision, December 1999 4th revision, May 2011 Prepared for U.S. Department of Commerce Ohio Department of Natural Resources National Oceanic and Atmospheric Administration Division of Wildlife Office of Ocean and Coastal Resource Management 2045 Morse Road, Bldg. G Estuarine Reserves Division Columbus, Ohio 1305 East West Highway 43229-6693 Silver Spring, MD 20910 This management plan has been developed in accordance with NOAA regulations, including all provisions for public involvement. It is consistent with the congressional intent of Section 315 of the Coastal Zone Management Act of 1972, as amended, and the provisions of the Ohio Coastal Management Program. OWC NERR Management Plan, 2011 - 2016 Acknowledgements This management plan was prepared by the staff and Advisory Council of the Old Woman Creek National Estuarine Research Reserve (OWC NERR), in collaboration with the Ohio Department of Natural Resources-Division of Wildlife. Participants in the planning process included: Manager, Frank Lopez; Research Coordinator, Dr. David Klarer; Coastal Training Program Coordinator, Heather Elmer; Education Coordinator, Ann Keefe; Education Specialist Phoebe Van Zoest; and Office Assistant, Gloria Pasterak. Other Reserve staff including Dick Boyer and Marje Bernhardt contributed their expertise to numerous planning meetings. The Reserve is grateful for the input and recommendations provided by members of the Old Woman Creek NERR Advisory Council. The Reserve is appreciative of the review, guidance, and council of Division of Wildlife Executive Administrator Dave Scott and the mapping expertise of Keith Lott and the late Steve Barry. -
A Revised Classification of Naked Lobose Amoebae (Amoebozoa
Protist, Vol. 162, 545–570, October 2011 http://www.elsevier.de/protis Published online date 28 July 2011 PROTIST NEWS A Revised Classification of Naked Lobose Amoebae (Amoebozoa: Lobosa) Introduction together constitute the amoebozoan subphy- lum Lobosa, which never have cilia or flagella, Molecular evidence and an associated reevaluation whereas Variosea (as here revised) together with of morphology have recently considerably revised Mycetozoa and Archamoebea are now grouped our views on relationships among the higher-level as the subphylum Conosa, whose constituent groups of amoebae. First of all, establishing the lineages either have cilia or flagella or have lost phylum Amoebozoa grouped all lobose amoe- them secondarily (Cavalier-Smith 1998, 2009). boid protists, whether naked or testate, aerobic Figure 1 is a schematic tree showing amoebozoan or anaerobic, with the Mycetozoa and Archamoe- relationships deduced from both morphology and bea (Cavalier-Smith 1998), and separated them DNA sequences. from both the heterolobosean amoebae (Page and The first attempt to construct a congruent molec- Blanton 1985), now belonging in the phylum Per- ular and morphological system of Amoebozoa by colozoa - Cavalier-Smith and Nikolaev (2008), and Cavalier-Smith et al. (2004) was limited by the the filose amoebae that belong in other phyla lack of molecular data for many amoeboid taxa, (notably Cercozoa: Bass et al. 2009a; Howe et al. which were therefore classified solely on morpho- 2011). logical evidence. Smirnov et al. (2005) suggested The phylum Amoebozoa consists of naked and another system for naked lobose amoebae only; testate lobose amoebae (e.g. Amoeba, Vannella, this left taxa with no molecular data incertae sedis, Hartmannella, Acanthamoeba, Arcella, Difflugia), which limited its utility. -
Paramoeba Pemaquidensis (Sarcomastigophora: Paramoebidae) Infestation of the Gills of Coho Salmon Oncorhynchus Kisutch Reared in Sea Water
Vol. 5: 163-169, 1988 DISEASES OF AQUATIC ORGANISMS Published December 2 Dis. aquat. Org. Paramoeba pemaquidensis (Sarcomastigophora: Paramoebidae) infestation of the gills of coho salmon Oncorhynchus kisutch reared in sea water Michael L. ~ent'l*,T. K. Sawyer2,R. P. ~edrick~ 'Battelle Marine Research Laboratory, 439 West Sequim Bay Rd, Sequim, Washington 98382, USA '~esconAssociates, Inc., Box 206, Turtle Cove, Royal Oak, Maryland 21662, USA 3~epartmentof Medicine, School of Veterinary Medicine, University of California, Davis, California 95616, USA ABSTRACT: Gill disease associated with Paramoeba pemaquidensis Page 1970 (Sarcomastigophora: Paramoebidae) infestations was observed in coho salmon Oncorhynchus lasutch reared in sea water Fish reared in net pens in Washington and in land-based tanks in California were affected. Approxi- mately 25 O/O mortality was observed in the net pens in 1985, and the disease recurred in 1986 and 1987. Amoeba infesting the gill surfaces elicited prominent epithelia1 hyperplasia. Typical of Paramoeba spp., the parasite had a Feulgen positive parasome (Nebenkorper) adjacent to the nucleus and floatlng and transitional forms had digitiform pseudopodia. We have established cultures of the organism from coho gills; it grows rapidly on Malt-yeast extract sea water medium supplemented with Klebsiella bacteria. Ultrastructural characteristics and nuclear, parasome and overall size of the organism in study indicated it is most closely related to the free-living paramoeba P. pemaquidensis. The plasmalemma of the amoeba from coho gills has surface filaments. Measurements (in pm) of the amoeba under various conditions are as follows: transitional forms directly from gills 28 (24 to 30),locomotive forms from liquid culture 21 X 17 (15 to 35 X 11 to 25), and locomotive forms from agar culture 25 X 20 (15 to 38 X 15 to 25). -
The Revised Classification of Eukaryotes
See discussions, stats, and author profiles for this publication at: https://www.researchgate.net/publication/231610049 The Revised Classification of Eukaryotes Article in Journal of Eukaryotic Microbiology · September 2012 DOI: 10.1111/j.1550-7408.2012.00644.x · Source: PubMed CITATIONS READS 961 2,825 25 authors, including: Sina M Adl Alastair Simpson University of Saskatchewan Dalhousie University 118 PUBLICATIONS 8,522 CITATIONS 264 PUBLICATIONS 10,739 CITATIONS SEE PROFILE SEE PROFILE Christopher E Lane David Bass University of Rhode Island Natural History Museum, London 82 PUBLICATIONS 6,233 CITATIONS 464 PUBLICATIONS 7,765 CITATIONS SEE PROFILE SEE PROFILE Some of the authors of this publication are also working on these related projects: Biodiversity and ecology of soil taste amoeba View project Predator control of diversity View project All content following this page was uploaded by Smirnov Alexey on 25 October 2017. The user has requested enhancement of the downloaded file. The Journal of Published by the International Society of Eukaryotic Microbiology Protistologists J. Eukaryot. Microbiol., 59(5), 2012 pp. 429–493 © 2012 The Author(s) Journal of Eukaryotic Microbiology © 2012 International Society of Protistologists DOI: 10.1111/j.1550-7408.2012.00644.x The Revised Classification of Eukaryotes SINA M. ADL,a,b ALASTAIR G. B. SIMPSON,b CHRISTOPHER E. LANE,c JULIUS LUKESˇ,d DAVID BASS,e SAMUEL S. BOWSER,f MATTHEW W. BROWN,g FABIEN BURKI,h MICAH DUNTHORN,i VLADIMIR HAMPL,j AARON HEISS,b MONA HOPPENRATH,k ENRIQUE LARA,l LINE LE GALL,m DENIS H. LYNN,n,1 HILARY MCMANUS,o EDWARD A. D. -
Worms, Germs, and Other Symbionts from the Northern Gulf of Mexico CRCDU7M COPY Sea Grant Depositor
h ' '' f MASGC-B-78-001 c. 3 A MARINE MALADIES? Worms, Germs, and Other Symbionts From the Northern Gulf of Mexico CRCDU7M COPY Sea Grant Depositor NATIONAL SEA GRANT DEPOSITORY \ PELL LIBRARY BUILDING URI NA8RAGANSETT BAY CAMPUS % NARRAGANSETT. Rl 02882 Robin M. Overstreet r ii MISSISSIPPI—ALABAMA SEA GRANT CONSORTIUM MASGP—78—021 MARINE MALADIES? Worms, Germs, and Other Symbionts From the Northern Gulf of Mexico by Robin M. Overstreet Gulf Coast Research Laboratory Ocean Springs, Mississippi 39564 This study was conducted in cooperation with the U.S. Department of Commerce, NOAA, Office of Sea Grant, under Grant No. 04-7-158-44017 and National Marine Fisheries Service, under PL 88-309, Project No. 2-262-R. TheMississippi-AlabamaSea Grant Consortium furnish ed all of the publication costs. The U.S. Government is authorized to produceand distribute reprints for governmental purposes notwithstanding any copyright notation that may appear hereon. Copyright© 1978by Mississippi-Alabama Sea Gram Consortium and R.M. Overstrect All rights reserved. No pari of this book may be reproduced in any manner without permission from the author. Primed by Blossman Printing, Inc.. Ocean Springs, Mississippi CONTENTS PREFACE 1 INTRODUCTION TO SYMBIOSIS 2 INVERTEBRATES AS HOSTS 5 THE AMERICAN OYSTER 5 Public Health Aspects 6 Dcrmo 7 Other Symbionts and Diseases 8 Shell-Burrowing Symbionts II Fouling Organisms and Predators 13 THE BLUE CRAB 15 Protozoans and Microbes 15 Mclazoans and their I lypeiparasites 18 Misiellaneous Microbes and Protozoans 25 PENAEID -
Midwater Data Sheet
MIDWATER TRAWL DATA SHEET RESEARCH VESSEL__________________________________(1/20/2013Version*) CLASS__________________;DATE_____________;NAME:_________________________; DEVICE DETAILS___________ LOCATION (OVERBOARD): LAT_______________________; LONG___________________________ LOCATION (AT DEPTH): LAT_______________________; LONG______________________________ LOCATION (START UP): LAT_______________________; LONG______________________________ LOCATION (ONBOARD): LAT_______________________; LONG______________________________ BOTTOM DEPTH_________; DEPTH OF SAMPLE:____________; DURATION OF TRAWL___________; TIME: IN_________AT DEPTH________START UP__________SURFACE_________ SHIP SPEED__________; WEATHER__________________; SEA STATE_________________; AIR TEMP______________ SURFACE TEMP__________; PHYS. OCE. NOTES______________________; NOTES_____________________________ INVERTEBRATES Lensia hostile_______________________ PHYLUM RADIOLARIA Lensia havock______________________ Family Tuscaroridae “Round yellow ones”___ Family Hippopodiidae Vogtia sp.___________________________ PHYLUM CTENOPHORA Family Prayidae Subfamily Nectopyramidinae Class Nuda "Pointed siphonophores"________________ Order Beroida Nectadamas sp._______________________ Family Beroidae Nectopyramis sp.______________________ Beroe abyssicola_____________________ Family Prayidae Beroe forskalii________________________ Subfamily Prayinae Beroe cucumis _______________________ Craseoa lathetica_____________________ Class Tentaculata Desmophyes annectens_________________ Subclass -
Basal Metazoans - Dirk Erpenbeck, Simion Paul, Michael Manuel, Paulyn Cartwright, Oliver Voigt and Gert Worheide
EVOLUTION OF PHYLOGENETIC TREE OF LIFE - Basal Metazoans - Dirk Erpenbeck, Simion Paul, Michael Manuel, Paulyn Cartwright, Oliver Voigt and Gert Worheide BASAL METAZOANS Dirk Erpenbeck Ludwig-Maximilians Universität München, Germany Simion Paul and Michaël Manuel Université Pierre et Marie Curie in Paris, France. Paulyn Cartwright University of Kansas USA. Oliver Voigt and Gert Wörheide Ludwig-Maximilians Universität München, Germany Keywords: Metazoa, Porifera, sponges, Placozoa, Cnidaria, anthozoans, jellyfishes, Ctenophora, comb jellies Contents 1. Introduction on ―Basal Metazoans‖ 2. Phylogenetic relationships among non-bilaterian Metazoa 3. Porifera (Sponges) 4. Placozoa 5. Ctenophora (Comb-jellies) 6. Cnidaria 7. Cultural impact and relevance to human welfare Glossary Bibliography Biographical Sketch Summary Basal metazoans comprise the four non-bilaterian animal phyla Porifera (sponges), Cnidaria (anthozoans and jellyfishes), Placozoa (Trichoplax) and Ctenophora (comb jellies). The phylogenetic position of these taxa in the animal tree is pivotal for our understanding of the last common metazoan ancestor and the character evolution all Metazoa,UNESCO-EOLSS but is much debated. Morphological, evolutionary, internal and external phylogenetic aspects of the four phyla are highlighted and discussed. SAMPLE CHAPTERS 1. Introduction on “Basal Metazoans” In many textbooks the term ―lower metazoans‖ still refers to an undefined assemblage of invertebrate phyla, whose phylogenetic relationships were rather undefined. This assemblage may contain both bilaterian and non-bilaterian taxa. Currently, ―Basal Metazoa‖ refers to non-bilaterian animals only, four phyla that lack obvious bilateral symmetry, Porifera, Placozoa, Cnidaria and Ctenophora. ©Encyclopedia of Life Support Systems (EOLSS) EVOLUTION OF PHYLOGENETIC TREE OF LIFE - Basal Metazoans - Dirk Erpenbeck, Simion Paul, Michael Manuel, Paulyn Cartwright, Oliver Voigt and Gert Worheide These four phyla have classically been known as ―diploblastic‖ Metazoa. -
Animal Diversity Part 2
Textbook resources • pp. 517-522 • pp. 527-8 Animal Diversity • p. 530 part 2 • pp. 531-2 Clicker question In protostomes A. The blastopore becomes the mouth. B. The blastopore becomes the anus. C. Development involves indeterminate cleavage. D. B and C Fig. 25.2 Phylogeny to know (1). Symmetry Critical innovations to insert: Oral bilateral symmetry ecdysis mouth develops after anus multicellularity Aboral tissues 1 Animal diversity, part 2 Parazoa Diversity 2 I. Parazoa • Porifera: Sponges II. Cnidaria & Ctenophora • Tissues • Symmetry I. Outline the • Germ Layers III. Lophotrochozoa unique • Embryonic characteristics Development of sponges IV. Ecdysozoa • Body Cavities • Segmentation Parazoa Parazoa • Porifera: Sponges • Porifera: Sponges – Multicellular without – Hermaphrodites tissues – Sexual and asexual reproduction – Choanocytes (collar cells) use flagella to move water and nutrients into pores – Intracellular digestion Fig. 25.11 Animal diversity, part 2 Clicker Question Diversity 2 I. Parazoa In diploblastic animals, the inner lining of the digestive cavity or tract is derived from II. Cnidaria & Ctenophora A. Endoderm. II. Outline the B. Ectoderm. unique III. Lophotrochozoa C. Mesoderm. characteristics D. Coelom. of cnidarians and IV. Ecdysozoa ctenophores 2 Coral Box jelly Cnidaria and Ctenophora • Cnidarians – Coral; sea anemone; jellyfish; hydra; box jellies • Ctenophores – Comb jellies Sea anemone Jellyfish Hydra Comb jelly Cnidaria and Ctenophora Fig. 25.12 Coral Box jelly Cnidaria and Ctenophora • Tissues Fig. 25.12 –