Accelerating CUDA Graph Algorithms at Maximum Warp
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CUDA by Example
CUDA by Example AN INTRODUCTION TO GENERAL-PURPOSE GPU PROGRAMMING JASON SaNDERS EDWARD KANDROT Upper Saddle River, NJ • Boston • Indianapolis • San Francisco New York • Toronto • Montreal • London • Munich • Paris • Madrid Capetown • Sydney • Tokyo • Singapore • Mexico City Sanders_book.indb 3 6/12/10 3:15:14 PM Many of the designations used by manufacturers and sellers to distinguish their products are claimed as trademarks. Where those designations appear in this book, and the publisher was aware of a trademark claim, the designations have been printed with initial capital letters or in all capitals. The authors and publisher have taken care in the preparation of this book, but make no expressed or implied warranty of any kind and assume no responsibility for errors or omissions. No liability is assumed for incidental or consequential damages in connection with or arising out of the use of the information or programs contained herein. NVIDIA makes no warranty or representation that the techniques described herein are free from any Intellectual Property claims. The reader assumes all risk of any such claims based on his or her use of these techniques. The publisher offers excellent discounts on this book when ordered in quantity for bulk purchases or special sales, which may include electronic versions and/or custom covers and content particular to your business, training goals, marketing focus, and branding interests. For more information, please contact: U.S. Corporate and Government Sales (800) 382-3419 [email protected] For sales outside the United States, please contact: International Sales [email protected] Visit us on the Web: informit.com/aw Library of Congress Cataloging-in-Publication Data Sanders, Jason. -
Bitfusion Guide to CUDA Installation Bitfusion Guides Bitfusion: Bitfusion Guide to CUDA Installation
WHITE PAPER–OCTOBER 2019 Bitfusion Guide to CUDA Installation Bitfusion Guides Bitfusion: Bitfusion Guide to CUDA Installation Table of Contents Purpose 3 Introduction 3 Some Sources of Confusion 4 So Many Prerequisites 4 Installing the NVIDIA Repository 4 Installing the NVIDIA Driver 6 Installing NVIDIA CUDA 6 Installing cuDNN 7 Speed It Up! 8 Upgrading CUDA 9 WHITE PAPER | 2 Bitfusion: Bitfusion Guide to CUDA Installation Purpose Bitfusion FlexDirect provides a GPU virtualization solution. It allows you to use the GPUs, or even partial GPUs (e.g., half of a GPU, or a quarter, or one-third of a GPU), on different servers as if they were attached to your local machine, a machine on which you can now run a CUDA application even though it has no GPUs of its own. Since Bitfusion FlexDirect software and ML/AI (machine learning/artificial intelligence) applications require other CUDA libraries and drivers, this document describes how to install the prerequisite software for both Bitfusion FlexDirect and for various ML/AI applications. If you already have your CUDA drivers and libraries installed, you can skip ahead to the chapter on installing Bitfusion FlexDirect. This document gives instruction and examples for Ubuntu, Red Hat, and CentOS systems. Introduction Bitfusion’s software tool is called FlexDirect. FlexDirect easily installs with a single command, but installing the third-party prerequisite drivers and libraries, plus any application and its prerequisite software, can seem a Gordian Knot to users new to CUDA code and ML/AI applications. We will begin untangling the knot with a table of the components involved. -
2.5 Classification of Parallel Computers
52 // Architectures 2.5 Classification of Parallel Computers 2.5 Classification of Parallel Computers 2.5.1 Granularity In parallel computing, granularity means the amount of computation in relation to communication or synchronisation Periods of computation are typically separated from periods of communication by synchronization events. • fine level (same operations with different data) ◦ vector processors ◦ instruction level parallelism ◦ fine-grain parallelism: – Relatively small amounts of computational work are done between communication events – Low computation to communication ratio – Facilitates load balancing 53 // Architectures 2.5 Classification of Parallel Computers – Implies high communication overhead and less opportunity for per- formance enhancement – If granularity is too fine it is possible that the overhead required for communications and synchronization between tasks takes longer than the computation. • operation level (different operations simultaneously) • problem level (independent subtasks) ◦ coarse-grain parallelism: – Relatively large amounts of computational work are done between communication/synchronization events – High computation to communication ratio – Implies more opportunity for performance increase – Harder to load balance efficiently 54 // Architectures 2.5 Classification of Parallel Computers 2.5.2 Hardware: Pipelining (was used in supercomputers, e.g. Cray-1) In N elements in pipeline and for 8 element L clock cycles =) for calculation it would take L + N cycles; without pipeline L ∗ N cycles Example of good code for pipelineing: §doi =1 ,k ¤ z ( i ) =x ( i ) +y ( i ) end do ¦ 55 // Architectures 2.5 Classification of Parallel Computers Vector processors, fast vector operations (operations on arrays). Previous example good also for vector processor (vector addition) , but, e.g. recursion – hard to optimise for vector processors Example: IntelMMX – simple vector processor. -
Balanced Multithreading: Increasing Throughput Via a Low Cost Multithreading Hierarchy
Balanced Multithreading: Increasing Throughput via a Low Cost Multithreading Hierarchy Eric Tune Rakesh Kumar Dean M. Tullsen Brad Calder Computer Science and Engineering Department University of California at San Diego {etune,rakumar,tullsen,calder}@cs.ucsd.edu Abstract ibility of SMT comes at a cost. The register file and rename tables must be enlarged to accommodate the architectural reg- A simultaneous multithreading (SMT) processor can issue isters of the additional threads. This in turn can increase the instructions from several threads every cycle, allowing it to clock cycle time and/or the depth of the pipeline. effectively hide various instruction latencies; this effect in- Coarse-grained multithreading (CGMT) [1, 21, 26] is a creases with the number of simultaneous contexts supported. more restrictive model where the processor can only execute However, each added context on an SMT processor incurs a instructions from one thread at a time, but where it can switch cost in complexity, which may lead to an increase in pipeline to a new thread after a short delay. This makes CGMT suited length or a decrease in the maximum clock rate. This pa- for hiding longer delays. Soon, general-purpose micropro- per presents new designs for multithreaded processors which cessors will be experiencing delays to main memory of 500 combine a conservative SMT implementation with a coarse- or more cycles. This means that a context switch in response grained multithreading capability. By presenting more virtual to a memory access can take tens of cycles and still provide contexts to the operating system and user than are supported a considerable performance benefit. -
Parallel Architectures and Algorithms for Large-Scale Nonlinear Programming
Parallel Architectures and Algorithms for Large-Scale Nonlinear Programming Carl D. Laird Associate Professor, School of Chemical Engineering, Purdue University Faculty Fellow, Mary Kay O’Connor Process Safety Center Laird Research Group: http://allthingsoptimal.com Landscape of Scientific Computing 10$ 1$ 50%/year 20%/year Clock&Rate&(GHz)& 0.1$ 0.01$ 1980$ 1985$ 1990$ 1995$ 2000$ 2005$ 2010$ Year& [Steven Edwards, Columbia University] 2 Landscape of Scientific Computing Clock-rate, the source of past speed improvements have stagnated. Hardware manufacturers are shifting their focus to energy efficiency (mobile, large10" data centers) and parallel architectures. 12" 10" 1" 8" 6" #"of"Cores" Clock"Rate"(GHz)" 0.1" 4" 2" 0.01" 0" 1980" 1985" 1990" 1995" 2000" 2005" 2010" Year" 3 “… over a 15-year span… [problem] calculations improved by a factor of 43 million. [A] factor of roughly 1,000 was attributable to faster processor speeds, … [yet] a factor of 43,000 was due to improvements in the efficiency of software algorithms.” - attributed to Martin Grotschel [Steve Lohr, “Software Progress Beats Moore’s Law”, New York Times, March 7, 2011] Landscape of Computing 5 Landscape of Computing High-Performance Parallel Architectures Multi-core, Grid, HPC clusters, Specialized Architectures (GPU) 6 Landscape of Computing High-Performance Parallel Architectures Multi-core, Grid, HPC clusters, Specialized Architectures (GPU) 7 Landscape of Computing data VM iOS and Android device sales High-Performance have surpassed PC Parallel Architectures iPhone performance -
Amdahl's Law Threading, Openmp
Computer Science 61C Spring 2018 Wawrzynek and Weaver Amdahl's Law Threading, OpenMP 1 Big Idea: Amdahl’s (Heartbreaking) Law Computer Science 61C Spring 2018 Wawrzynek and Weaver • Speedup due to enhancement E is Exec time w/o E Speedup w/ E = ---------------------- Exec time w/ E • Suppose that enhancement E accelerates a fraction F (F <1) of the task by a factor S (S>1) and the remainder of the task is unaffected Execution Time w/ E = Execution Time w/o E × [ (1-F) + F/S] Speedup w/ E = 1 / [ (1-F) + F/S ] 2 Big Idea: Amdahl’s Law Computer Science 61C Spring 2018 Wawrzynek and Weaver Speedup = 1 (1 - F) + F Non-speed-up part S Speed-up part Example: the execution time of half of the program can be accelerated by a factor of 2. What is the program speed-up overall? 1 1 = = 1.33 0.5 + 0.5 0.5 + 0.25 2 3 Example #1: Amdahl’s Law Speedup w/ E = 1 / [ (1-F) + F/S ] Computer Science 61C Spring 2018 Wawrzynek and Weaver • Consider an enhancement which runs 20 times faster but which is only usable 25% of the time Speedup w/ E = 1/(.75 + .25/20) = 1.31 • What if its usable only 15% of the time? Speedup w/ E = 1/(.85 + .15/20) = 1.17 • Amdahl’s Law tells us that to achieve linear speedup with 100 processors, none of the original computation can be scalar! • To get a speedup of 90 from 100 processors, the percentage of the original program that could be scalar would have to be 0.1% or less Speedup w/ E = 1/(.001 + .999/100) = 90.99 4 Amdahl’s Law If the portion of Computer Science 61C Spring 2018 the program that Wawrzynek and Weaver can be parallelized is small, then the speedup is limited The non-parallel portion limits the performance 5 Strong and Weak Scaling Computer Science 61C Spring 2018 Wawrzynek and Weaver • To get good speedup on a parallel processor while keeping the problem size fixed is harder than getting good speedup by increasing the size of the problem. -
(GPU) Computing
Graphics Processing Unit (GPU) computing This section describes the graphics processing unit (GPU) computing feature of OptiSystem. Note: The GPU computing feature is only configurable with OptiSystem Version 11 (or higher) What is GPU computing? GPU computing or GPGPU takes advantage of a computer’s grahics processing card to augment the speed of general purpose scientific and engineering computing tasks. Compute Unified Device Architecture (CUDA) implementation for OptiSystem NVIDIA revolutionized the GPGPU and accelerated computing when it introduced a new parallel computing architecture: Compute Unified Device Architecture (CUDA). CUDA is both a hardware and software architecture for issuing and managing computations within the GPU, thus allowing it to operate as a generic data-parallel computing device. CUDA allows the programmer to take advantage of the parallel computing power of an NVIDIA graphics card to perform general purpose computations. OptiSystem CUDA implementation The OptiSystem model for GPU computing involves using a central processing unit (CPU) and GPU together in a heterogeneous co-processing computing model. The sequential part of the application runs on the CPU and the computationally-intensive part is accelerated by the GPU. In the OptiSystem GPU programming model, the application has been modified to map the compute-intensive kernels to the GPU. The remainder of the application remains within the CPU. CUDA parallel computing architecture The NVIDIA CUDA parallel computing architecture is enabled on GeForce®, Quadro®, and Tesla™ products. Whereas GeForce and Quadro are designed for consumer graphics and professional visualization respectively, the Tesla product family is designed ground-up for parallel computing and offers exclusive computing 3 GRAPHICS PROCESSING UNIT (GPU) COMPUTING features, and is the recommended choice for the OptiSystem GPU. -
Computer Hardware Architecture Lecture 4
Computer Hardware Architecture Lecture 4 Manfred Liebmann Technische Universit¨atM¨unchen Chair of Optimal Control Center for Mathematical Sciences, M17 [email protected] November 10, 2015 Manfred Liebmann November 10, 2015 Reading List • Pacheco - An Introduction to Parallel Programming (Chapter 1 - 2) { Introduction to computer hardware architecture from the parallel programming angle • Hennessy-Patterson - Computer Architecture - A Quantitative Approach { Reference book for computer hardware architecture All books are available on the Moodle platform! Computer Hardware Architecture 1 Manfred Liebmann November 10, 2015 UMA Architecture Figure 1: A uniform memory access (UMA) multicore system Access times to main memory is the same for all cores in the system! Computer Hardware Architecture 2 Manfred Liebmann November 10, 2015 NUMA Architecture Figure 2: A nonuniform memory access (UMA) multicore system Access times to main memory differs form core to core depending on the proximity of the main memory. This architecture is often used in dual and quad socket servers, due to improved memory bandwidth. Computer Hardware Architecture 3 Manfred Liebmann November 10, 2015 Cache Coherence Figure 3: A shared memory system with two cores and two caches What happens if the same data element z1 is manipulated in two different caches? The hardware enforces cache coherence, i.e. consistency between the caches. Expensive! Computer Hardware Architecture 4 Manfred Liebmann November 10, 2015 False Sharing The cache coherence protocol works on the granularity of a cache line. If two threads manipulate different element within a single cache line, the cache coherency protocol is activated to ensure consistency, even if every thread is only manipulating its own data. -
Parallel Generation of Image Layers Constructed by Edge Detection
International Journal of Applied Engineering Research ISSN 0973-4562 Volume 13, Number 10 (2018) pp. 7323-7332 © Research India Publications. http://www.ripublication.com Speed Up Improvement of Parallel Image Layers Generation Constructed By Edge Detection Using Message Passing Interface Alaa Ismail Elnashar Faculty of Science, Computer Science Department, Minia University, Egypt. Associate professor, Department of Computer Science, College of Computers and Information Technology, Taif University, Saudi Arabia. Abstract A. Elnashar [29] introduced two parallel techniques, NASHT1 and NASHT2 that apply edge detection to produce a set of Several image processing techniques require intensive layers for an input image. The proposed techniques generate computations that consume CPU time to achieve their results. an arbitrary number of image layers in a single parallel run Accelerating these techniques is a desired goal. Parallelization instead of generating a unique layer as in traditional case; this can be used to save the execution time of such techniques. In helps in selecting the layers with high quality edges among this paper, we propose a parallel technique that employs both the generated ones. Each presented parallel technique has two point to point and collective communication patterns to versions based on point to point communication "Send" and improve the speedup of two parallel edge detection techniques collective communication "Bcast" functions. The presented that generate multiple image layers using Message Passing techniques achieved notable relative speedup compared with Interface, MPI. In addition, the performance of the proposed that of sequential ones. technique is compared with that of the two concerned ones. In this paper, we introduce a speed up improvement for both Keywords: Image Processing, Image Segmentation, Parallel NASHT1 and NASHT2. -
Massively Parallel Computing with CUDA
Massively Parallel Computing with CUDA Antonino Tumeo Politecnico di Milano 1 GPUs have evolved to the point where many real world applications are easily implemented on them and run significantly faster than on multi-core systems. Future computing architectures will be hybrid systems with parallel-core GPUs working in tandem with multi-core CPUs. Jack Dongarra Professor, University of Tennessee; Author of “Linpack” Why Use the GPU? • The GPU has evolved into a very flexible and powerful processor: • It’s programmable using high-level languages • It supports 32-bit and 64-bit floating point IEEE-754 precision • It offers lots of GFLOPS: • GPU in every PC and workstation What is behind such an Evolution? • The GPU is specialized for compute-intensive, highly parallel computation (exactly what graphics rendering is about) • So, more transistors can be devoted to data processing rather than data caching and flow control ALU ALU Control ALU ALU Cache DRAM DRAM CPU GPU • The fast-growing video game industry exerts strong economic pressure that forces constant innovation GPUs • Each NVIDIA GPU has 240 parallel cores NVIDIA GPU • Within each core 1.4 Billion Transistors • Floating point unit • Logic unit (add, sub, mul, madd) • Move, compare unit • Branch unit • Cores managed by thread manager • Thread manager can spawn and manage 12,000+ threads per core 1 Teraflop of processing power • Zero overhead thread switching Heterogeneous Computing Domains Graphics Massive Data GPU Parallelism (Parallel Computing) Instruction CPU Level (Sequential -
CS650 Computer Architecture Lecture 10 Introduction to Multiprocessors
NJIT Computer Science Dept CS650 Computer Architecture CS650 Computer Architecture Lecture 10 Introduction to Multiprocessors and PC Clustering Andrew Sohn Computer Science Department New Jersey Institute of Technology Lecture 10: Intro to Multiprocessors/Clustering 1/15 12/7/2003 A. Sohn NJIT Computer Science Dept CS650 Computer Architecture Key Issues Run PhotoShop on 1 PC or N PCs Programmability • How to program a bunch of PCs viewed as a single logical machine. Performance Scalability - Speedup • Run PhotoShop on 1 PC (forget the specs of this PC) • Run PhotoShop on N PCs • Will it run faster on N PCs? Speedup = ? Lecture 10: Intro to Multiprocessors/Clustering 2/15 12/7/2003 A. Sohn NJIT Computer Science Dept CS650 Computer Architecture Types of Multiprocessors Key: Data and Instruction Single Instruction Single Data (SISD) • Intel processors, AMD processors Single Instruction Multiple Data (SIMD) • Array processor • Pentium MMX feature Multiple Instruction Single Data (MISD) • Systolic array • Special purpose machines Multiple Instruction Multiple Data (MIMD) • Typical multiprocessors (Sun, SGI, Cray,...) Single Program Multiple Data (SPMD) • Programming model Lecture 10: Intro to Multiprocessors/Clustering 3/15 12/7/2003 A. Sohn NJIT Computer Science Dept CS650 Computer Architecture Shared-Memory Multiprocessor Processor Prcessor Prcessor Interconnection network Main Memory Storage I/O Lecture 10: Intro to Multiprocessors/Clustering 4/15 12/7/2003 A. Sohn NJIT Computer Science Dept CS650 Computer Architecture Distributed-Memory Multiprocessor Processor Processor Processor IO/S MM IO/S MM IO/S MM Interconnection network IO/S MM IO/S MM IO/S MM Processor Processor Processor Lecture 10: Intro to Multiprocessors/Clustering 5/15 12/7/2003 A. -
CUDA Flux: a Lightweight Instruction Profiler for CUDA Applications
CUDA Flux: A Lightweight Instruction Profiler for CUDA Applications Lorenz Braun Holger Froning¨ Institute of Computer Engineering Institute of Computer Engineering Heidelberg University Heidelberg University Heidelberg, Germany Heidelberg, Germany [email protected] [email protected] Abstract—GPUs are powerful, massively parallel processors, hardware, it lacks verbosity when it comes to analyzing the which require a vast amount of thread parallelism to keep their different types of instructions executed. This problem is aggra- thousands of execution units busy, and to tolerate latency when vated by the recently frequent introduction of new instructions, accessing its high-throughput memory system. Understanding the behavior of massively threaded GPU programs can be for instance floating point operations with reduced precision difficult, even though recent GPUs provide an abundance of or special function operations including Tensor Cores for ma- hardware performance counters, which collect statistics about chine learning. Similarly, information on the use of vectorized certain events. Profiling tools that assist the user in such analysis operations is often lost. Characterizing workloads on PTX for their GPUs, like NVIDIA’s nvprof and cupti, are state-of- level is desirable as PTX allows us to determine the exact types the-art. However, instrumentation based on reading hardware performance counters can be slow, in particular when the number of the instructions a kernel executes. On the contrary, nvprof of metrics is large. Furthermore, the results can be inaccurate as metrics are based on a lower-level representation called SASS. instructions are grouped to match the available set of hardware Still, even if there was an exact mapping, some information on counters.