The Molecular Mechanisms by Which Vitamin D Prevents Insulin Resistance and Associated Disorders
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Molecular, Genetic, and Nutritional Aspects of Major and Trace Minerals
Molecular, Genetic, and Nutritional Aspects of Major and Trace Minerals Edited by James F. Collins AMSTERDAM • BOSTON • HEIDELBERG • LONDON • NEW ORK • OFORD • PARIS SAN DIEGO • SAN FRANCISCO • SINGAPORE • SDNE • TOKO Academic Press is an imprint of Elsevier Academic Press is an imprint of Elsevier 125 London Wall, London EC2Y 5AS, United Kingdom 525 B Street, Suite 1800, San Diego, CA 92101-4495, United States 50 Hampshire Street, 5th Floor, Cambridge, MA 02139, United States The Boulevard, Langford Lane, Kidlington, Oxford OX5 1GB, United Kingdom Copyright © 2017 Elsevier Inc. All rights reserved. No part of this publication may be reproduced or transmitted in any form or by any means, electronic or mechanical, including photocopying, recording, or any information storage and retrieval system, without permission in writing from the publisher. Details on how to seek permission, further information about the Publisher’s permissions policies and our arrangements with organizations such as the Copyright Clearance Center and the Copyright Licensing Agency, can be found at our website: www.elsevier.com/permissions. This book and the individual contributions contained in it are protected under copyright by the Publisher (other than as may be noted herein). Notices Knowledge and best practice in this field are constantly changing. As new research and experience broaden our understanding, changes in research methods, professional practices, or medical treatment may become necessary. Practitioners and researchers must always rely on their own experience and knowledge in evaluating and using any information, methods, compounds, or experiments described herein. In using such information or methods they should be mindful of their own safety and the safety of others, including parties for whom they have a professional responsibility. -
Overview of Bariatric Surgery for the Physician
■ CLINICAL PRACTICE Clinical Medicine 2012, Vol 12, No 5: 435–40 Overview of bariatric surgery for the physician Keng Ngee Hng and Yeng S Ang ABSTRACT – The worldwide pandemic of obesity carries effectiveness2,6,15 have fuelled an increase in the number of pro- alarming health and socioeconomic implications. Bariatric cedures performed. surgery is currently the only effective treatment for severe obesity. It is safe, with mortality comparable to that of chole- Types of surgery cystectomy, and effective in producing substantial and sus- tainable weight loss, along with high rates of resolution of Bariatric surgical procedures are traditionally classified as restric- associated comorbidities, including type 2 diabetes. For this tive, malabsorptive or combined according to their mechanism reason, indications for bariatric surgery are being widened. In of action. The procedures most commonly performed are addition to volume restriction and malabsorption, bariatric laparoscopic adjustable gastric banding and roux-en-y gastric surgery brings about neurohormonal changes that affect bypass.3,13 Sleeve gastrectomy is increasingly performed.2,6,7 satiety and glucose homeostasis. Increased understanding of Biliopancreatic diversion and biliopancreatic diversion with these mechanisms will help realise therapeutic benefits by duodenal switch are much more complex and performed infre- pharmacological means. Bariatric surgery improves long-term quently.2,5,17,22 Other historical procedures are no longer in mortality but can cause long-term nutritional deficiencies. common use. The safety of pregnancy after bariatric surgery is still being In addition to restriction and malabsorption, recent evidence elucidated. suggests that neurohormonal changes are an important effect of bariatric surgery.2,6,7,17,18 Bariatric surgery is only part of the KEY WORDS: bariatric surgery, obesity, weight loss, diabetes, management of severe obesity. -
Assessment of NR4A Ligands That Directly Bind and Modulate the Orphan Nuclear Receptor Nurr1
bioRxiv preprint doi: https://doi.org/10.1101/2020.05.22.109017; this version posted May 25, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY 4.0 International license. Assessment of NR4A Ligands that Directly Bind and Modulate the Orphan Nuclear Receptor Nurr1 Paola Munoz-Tello 1, Hua Lin 2,3, Pasha Khan 2, Ian Mitchelle S. de Vera 1,4, Theodore M. Kamenecka 2, and Douglas J. Kojetin 1,2,* 1 Department of Integrative Structural and Computational Biology, The Scripps Research Institute, Jupiter, FL, 33458, USA 2 Department of Molecular Medicine, The Scripps Research Institute, Jupiter, Florida 33458, USA 3 Current address: Biomedical Research Center of South China, College of Life Sciences, Fujian Normal University, Fuzhou 350117, China 4 Current address: Department of Pharmacology and Physiology, Saint Louis University School of Medicine, St. Louis, MO 63104, USA * Correspondence: [email protected] as ligands that increase Nurr1 transcription in human neuroblastoma SK- ABSTRACT N-BE(2)-C cells (11). Amodiaquine improves behavioral alterations in a Nurr1/NR4A2 is an orphan nuclear receptor transcription factor im- Parkinson’s disease animal model (11) and improves neuropathology and plicated as a potential drug target for neurological disorders including memory impairment in an Alzheimer’s disease animal model (12). Alzheimer’s and Parkinson’s diseases. Previous studies identified small molecule modulators of NR4A nuclear receptors including Nurr1 and Amodiaquine is the most potent and efficacious Nurr1 agonist of the Nur77/NR4A1; it remains unclear whether these ligands affect Nurr1 4-amino-7-chloroquinoline compounds, but these compounds are not through direct binding or indirect non-binding mechanisms. -
Role of Neuronal Glucosensing in the Regulation of Energy Homeostasis Barry E
Role of Neuronal Glucosensing in the Regulation of Energy Homeostasis Barry E. Levin,1,2 Ling Kang,2 Nicole M. Sanders,3 and Ambrose A. Dunn-Meynell1,2 Glucosensing is a property of specialized neurons in the studies of damage to the hypothalamus pointed to the brain that regulate their membrane potential and firing brain as the primary regulator of energy homeostasis. rate as a function of ambient glucose levels. These neurons Lesions of the ventromedial hypothalamus (VMH) produce have several similarities to - and ␣-cells in the pancreas, increased food intake (hyperphagia), obesity (1), and which are also responsive to ambient glucose levels. Many defective autonomic function in organs involved in the use glucokinase as a rate-limiting step in the production of ATP and its effects on membrane potential and ion channel regulation of energy expenditure (2,3). On the other hand, function to sense glucose. Glucosensing neurons are orga- electrical stimulation of the VMH leads to generalized nized in an interconnected distributed network throughout sympathoadrenal activation (4) with increased activity in the brain that also receives afferent neural input from thermogenic tissues (5). Lesions of the lateral hypotha- glucosensors in the liver, carotid body, and small intes- lamic area (LHA) reduce food intake and increase sympa- tines. In addition to glucose, glucosensing neurons can use thetic activity and eventually establish a new lower other metabolic substrates, hormones, and peptides to defended body weight (3,5,6). Whereas such early studies regulate their firing rate. Consequently, the output of pointed to the hypothalamus as the central controller of these “metabolic sensing” neurons represents their in- tegrated response to all of these simultaneous inputs. -
Experimental Chronic Jet Lag Promotes Growth and Lung Metastasis of Lewis Lung Carcinoma in C57BL/6 Mice
ONCOLOGY REPORTS 27: 1417-1428, 2012 Experimental chronic jet lag promotes growth and lung metastasis of Lewis lung carcinoma in C57BL/6 mice 1,2,6 1,3 1,4 1,2 1,5 MINGWEI WU , JING ZENG , YANFENG CHEN , ZHAOLEI ZENG , JINXIN ZHANG , YUCHEN CAI1,2, YANLI YE1,2, LIWU FU1,2, LIJIAN XIAN1,2 and ZHONGPING CHEN1,6 1 2 3 4 State Key Laboratory of Oncology in South China; Departments of Research, Pathology, and Head and Neck Cancer, Cancer Center, Sun Yat-Sen University; 5Department of Medical Statistics and Epidemiology, Sun Yat-Sen University; 6Department of Neurosurgery, Cancer Center, Sun Yat-Sen University, Guangzhou, Guangdong, P.R. China Received December 8, 2011; Accepted January 17, 2012 DOI: 10.3892/or.2012.1688 Abstract. Circadian rhythm has been linked to cancer genesis are governed by a biological clock. The mammalian circadian and development, but the detailed mechanism by which circa- clock contains three components: input pathways, a central dian disruption accelerates tumor growth remains unclear. The pacemaker and output pathways. The mammalian central purpose of this study was to investigate the effect of circadian pacemaker is located in the suprachiasmatic nuclei (SCN) disruption on tumor growth and metastasis in male C57BL/6 of the anterior hypothalamus and controls the activity of the mice, using an experimental chronic jet lag model. Lewis lung peripheral clocks through the neuroendocrine and autonomic carcinoma cells were inoculated into both flanks of the mice nervous systems (1,2). Circadian rhythms govern the rhythmic following 10 days of exposure to experimental chronic jet lag changes in the behavior and/or physiology of mammals, such or control conditions. -
A Computational Approach for Defining a Signature of Β-Cell Golgi Stress in Diabetes Mellitus
Page 1 of 781 Diabetes A Computational Approach for Defining a Signature of β-Cell Golgi Stress in Diabetes Mellitus Robert N. Bone1,6,7, Olufunmilola Oyebamiji2, Sayali Talware2, Sharmila Selvaraj2, Preethi Krishnan3,6, Farooq Syed1,6,7, Huanmei Wu2, Carmella Evans-Molina 1,3,4,5,6,7,8* Departments of 1Pediatrics, 3Medicine, 4Anatomy, Cell Biology & Physiology, 5Biochemistry & Molecular Biology, the 6Center for Diabetes & Metabolic Diseases, and the 7Herman B. Wells Center for Pediatric Research, Indiana University School of Medicine, Indianapolis, IN 46202; 2Department of BioHealth Informatics, Indiana University-Purdue University Indianapolis, Indianapolis, IN, 46202; 8Roudebush VA Medical Center, Indianapolis, IN 46202. *Corresponding Author(s): Carmella Evans-Molina, MD, PhD ([email protected]) Indiana University School of Medicine, 635 Barnhill Drive, MS 2031A, Indianapolis, IN 46202, Telephone: (317) 274-4145, Fax (317) 274-4107 Running Title: Golgi Stress Response in Diabetes Word Count: 4358 Number of Figures: 6 Keywords: Golgi apparatus stress, Islets, β cell, Type 1 diabetes, Type 2 diabetes 1 Diabetes Publish Ahead of Print, published online August 20, 2020 Diabetes Page 2 of 781 ABSTRACT The Golgi apparatus (GA) is an important site of insulin processing and granule maturation, but whether GA organelle dysfunction and GA stress are present in the diabetic β-cell has not been tested. We utilized an informatics-based approach to develop a transcriptional signature of β-cell GA stress using existing RNA sequencing and microarray datasets generated using human islets from donors with diabetes and islets where type 1(T1D) and type 2 diabetes (T2D) had been modeled ex vivo. To narrow our results to GA-specific genes, we applied a filter set of 1,030 genes accepted as GA associated. -
UNIVERSITY of CALIFORNIA, IRVINE Combinatorial Regulation By
UNIVERSITY OF CALIFORNIA, IRVINE Combinatorial regulation by maternal transcription factors during activation of the endoderm gene regulatory network DISSERTATION submitted in partial satisfaction of the requirements for the degree of DOCTOR OF PHILOSOPHY in Biological Sciences by Kitt D. Paraiso Dissertation Committee: Professor Ken W.Y. Cho, Chair Associate Professor Olivier Cinquin Professor Thomas Schilling 2018 Chapter 4 © 2017 Elsevier Ltd. © 2018 Kitt D. Paraiso DEDICATION To the incredibly intelligent and talented people, who in one way or another, helped complete this thesis. ii TABLE OF CONTENTS Page LIST OF FIGURES vii LIST OF TABLES ix LIST OF ABBREVIATIONS X ACKNOWLEDGEMENTS xi CURRICULUM VITAE xii ABSTRACT OF THE DISSERTATION xiv CHAPTER 1: Maternal transcription factors during early endoderm formation in 1 Xenopus Transcription factors co-regulate in a cell type-specific manner 2 Otx1 is expressed in a variety of cell lineages 4 Maternal otx1 in the endodermal conteXt 5 Establishment of enhancers by maternal transcription factors 9 Uncovering the endodermal gene regulatory network 12 Zygotic genome activation and temporal control of gene eXpression 14 The role of maternal transcription factors in early development 18 References 19 CHAPTER 2: Assembly of maternal transcription factors initiates the emergence 26 of tissue-specific zygotic cis-regulatory regions Introduction 28 Identification of maternal vegetally-localized transcription factors 31 Vegt and OtX1 combinatorially regulate the endodermal 33 transcriptome iii -
The Many Roles of MITF in Melanoma
e Cell Bio gl lo n g i y S Vachtenheim, Single Cell Biol 2017, 6:2 Single-Cell Biology DOI: 10.4172/2168-9431.1000162 ISSN: 2168-9431 Mini Review Open Access The Many Roles of MITF in Melanoma Jiri Vachtenheim* Department of Transcription and Cell Signaling, Institute of Medical Biochemistry and Laboratory Diagnostics, First Faculty of Medicine, Charles University and General University Hospital Prague, Czech Republic Abstract Microphthalmia-associated transcription factor (MITF) plays pivotal role in the maintenance of the melanocyte lineage, differentiation of normal and malignant melanocytes and the survival of melanoma cells. MITF regulates expression of many genes with critical functions in cell differentiation, proliferation, and pro-survival properties. Melanoma is an extremely resilient tumor for which no effective therapy exists when the tumor progresses into metastasis. Melanoma is a heterogenous tumor in which the microheterogeneity arises already in the first stages of the tumor development. Because the dependence of the melanocyte lineage on MITF is critical, MITF is regarded as the paradigmatic lineage-addiction oncogene and its gene is amplified in a smaller subset of melanomas. The level of MITF protein greatly differs among the tumor cells. Intriguingly, low MITF level cells are slowly proliferating but constitute an invasive subpopulation of tumor cells. In this minireview, I briefly discuss the many roles and activities of MITF in melanoma cells and the future prospects for melanoma therapy. Keywords: MITF; Melanoma; Phenotype switching; Melanoma was shown to be the necessary epigenetic transcriptional coactivator of proliferation; Differentiation; Invasion; Apoptosis MITF [21] and some of MITF targets [22]. Introduction Importance of MITF for Melanoma Differentiation and Malignant melanoma is a highly aggressive skin cancer, the Proliferation incidence of which is steadily on the rise. -
Anorexia Nervosa: Current Research from a Biological Perspective
The Science Journal of the Lander College of Arts and Sciences Volume 6 Number 1 Fall 2012 - 1-1-2012 Anorexia Nervosa: Current Research From a Biological Perspective Udy Tropp Touro College Follow this and additional works at: https://touroscholar.touro.edu/sjlcas Part of the Mental Disorders Commons, and the Nutritional and Metabolic Diseases Commons Recommended Citation Tropp, U. (2012). Anorexia Nervosa: Current Research From a Biological Perspective. The Science Journal of the Lander College of Arts and Sciences, 6(1). Retrieved from https://touroscholar.touro.edu/sjlcas/ vol6/iss1/14 This Article is brought to you for free and open access by the Lander College of Arts and Sciences at Touro Scholar. It has been accepted for inclusion in The Science Journal of the Lander College of Arts and Sciences by an authorized editor of Touro Scholar. For more information, please contact [email protected]. 143 ANOREXIA NERVOSA: CURRENT RESEARCH FROM A BIOLOGICAL PERSPECTIVE Udy Tropp ABSTRACT Eating disorders are viewed as serious mental illnesses, carrying significant, life-threatening medical and psychiatric implications, including morbidity and mortality. According to the Academy of Eating Disorders, anorexia nervosa has the highest mortality rate of any psychiatric disorder. The American Psychiatric Association (2004) claims that approximately three percent of the United States female population has a clinically relevant eating disorder. Risk of premature death is 6-12 times higher in women with anorexia as compared to the general population, and it has become the third most common form of chronic illness among adolescent women aged 15 to 19 years. Although the prevalence and seriousness of this problem have gained increasing attention in recent years, relatively little is known about the role that leptin plays in this disorder. -
KRAS Drives Immune Evasion in a Genetic Model of Pancreatic Cancer
ARTICLE https://doi.org/10.1038/s41467-021-21736-w OPEN KRAS drives immune evasion in a genetic model of pancreatic cancer Irene Ischenko1, Stephen D’Amico1, Manisha Rao2, Jinyu Li2, Michael J. Hayman1, Scott Powers 2, ✉ ✉ Oleksi Petrenko 1,3 & Nancy C. Reich 1,3 Immune evasion is a hallmark of KRAS-driven cancers, but the underlying causes remain unresolved. Here, we use a mouse model of pancreatic ductal adenocarcinoma to inactivate 1234567890():,; KRAS by CRISPR-mediated genome editing. We demonstrate that at an advanced tumor stage, dependence on KRAS for tumor growth is reduced and is manifested in the sup- pression of antitumor immunity. KRAS-deficient cells retain the ability to form tumors in immunodeficient mice. However, they fail to evade the host immune system in syngeneic wild-type mice, triggering strong antitumor response. We uncover changes both in tumor cells and host immune cells attributable to oncogenic KRAS expression. We identify BRAF and MYC as key mediators of KRAS-driven tumor immune suppression and show that loss of BRAF effectively blocks tumor growth in mice. Applying our results to human PDAC we show that lowering KRAS activity is likewise associated with a more vigorous immune environment. 1 Department of Molecular Genetics and Microbiology, Stony Brook University, Stony Brook, NY, USA. 2 Department of Pathology, Stony Brook University, ✉ Stony Brook, NY, USA. 3These authors jointly supervised this work: Oleksi Petrenko, Nancy C. Reich. email: [email protected]; [email protected] NATURE COMMUNICATIONS | (2021) 12:1482 | https://doi.org/10.1038/s41467-021-21736-w | www.nature.com/naturecommunications 1 ARTICLE NATURE COMMUNICATIONS | https://doi.org/10.1038/s41467-021-21736-w RAS is frequently associated with some of the deadliest and characterization of KRASG12D p53KO mouse cell lines forms of cancer. -
Review Article a Potential Linking Between Vitamin D and Adipose Metabolic Disorders
Hindawi Canadian Journal of Gastroenterology and Hepatology Volume 2020, Article ID 2656321, 9 pages https://doi.org/10.1155/2020/2656321 Review Article A Potential Linking between Vitamin D and Adipose Metabolic Disorders Zhiguo Miao ,1 Shan Wang ,1 Yimin Wang,1 Liping Guo ,1 Jinzhou Zhang ,1 Yang Liu ,1 and Qiyuan Yang 2 1College of Animal Science and Veterinary Medicine, Henan Institute of Science and Technology, Xinxiang, Henan 453003, China 2Department of Molecular, Cell and Cancer Biology, University of Massachusetts Medical School, Worcester, MA 01605, USA Correspondence should be addressed to Shan Wang; [email protected] and Qiyuan Yang; [email protected] Received 20 August 2019; Revised 10 November 2019; Accepted 27 November 2019; Published 19 February 2020 Guest Editor: Roberto Mart´ınez-Beamonte Copyright © 2020 Zhiguo Miao et al. 1is is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. Vitamin D has been discovered centuries ago, and current studies have focused on the biological effects of vitamin D on adipogenesis. Besides its role in calcium homeostasis and energy metabolism, vitamin D is also involved in the regulation of development and process of metabolic disorders. Adipose tissue is a major storage depot of vitamin D. 1is review summarized studies on the relationship between vitamin D and adipogenesis and furthermore focuses on adipose metabolic disorders. We reviewed the biological roles and functionalities of vitamin D, the correlation between vitamin D and adipose tissue, the effect of vitamin D on adipogenesis, and adipose metabolic diseases. -
Supplementary Data Genbank Or OSE Vs RO NIA Accession Gene Name Symbol FC B-Value H3073C09 11.38 5.62 H3126B09 9.64 6.44 H3073B0
Supplementary Data GenBank or OSE vs RO NIA accession Gene name Symbol FC B-value H3073C09 11.38 5.62 H3126B09 9.64 6.44 H3073B08 9.62 5.59 AU022767 Exportin 4 Xpo4 9.62 6.64 H3073B09 9.59 6.48 BG063925 Metallothionein 2 Mt2 9.23 18.89 H3064B07 9.21 6.10 H3073D08 8.28 6.10 AU021923 Jagged 1 Jag1 7.89 5.93 H3070D08 7.54 4.58 BG085110 Cysteine-rich protein 1 (intestinal) Crip1 6.23 16.40 BG063004 Lectin, galactose binding, soluble 1 Lgals1 5.95 10.36 BG069712 5.92 2.34 BG076976 Transcribed locus, strongly similar to NP_032521.1 lectin, galactose binding, soluble 1 5.64 8.36 BG062930 DNA segment, Chr 11, Wayne State University 99, expressed D11Wsu99e 5.63 8.76 BG086474 Insulin-like growth factor binding protein 5 Igfbp5 5.50 15.95 H3002d11 5.13 20.77 BG064706 Keratin complex 1, acidic, gene 19 Krt1-19 5.06 9.07 H3007A09 5.05 2.46 H3065F02 4.84 5.43 BG081752 4.81 1.25 H3010E09 4.71 11.90 H3064c11 4.43 1.00 BG069711 Transmembrane 4 superfamily member 9 Tm4sf9 4.29 1.23 BG077072 Actin, beta, cytoplasmic Actb 4.29 3.01 BG079788 Hemoglobin alpha, adult chain 1 Hba-a1 4.26 6.63 BG076798 4.23 0.80 BG074344 Mesothelin Msln 4.22 6.97 C78835 Actin, beta, cytoplasmic Actb 4.16 3.02 BG067531 4.15 1.61 BG073468 Hemoglobin alpha, adult chain 1 Hba-a1 4.10 6.23 H3154H07 4.08 5.38 AW550167 3.95 5.66 H3121B01 3.94 5.94 H3124f12 3.94 5.64 BG073608 Hemoglobin alpha, adult chain 1 Hba-a1 3.84 5.32 BG073617 Hemoglobin alpha, adult chain 1 Hba-a1 3.84 5.75 BG072574 Hemoglobin alpha, adult chain 1 Hba-a1 3.82 5.93 BG072211 Tumor necrosis factor receptor superfamily,