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The Oxidation of Secondary Alcohols by Dimethyldioxirane: Re-Examination of Kinetic Isotope Effects
Heterocycl. Commun., Vol. 16(4-6), pp. 217–220, 2010 • Copyright © by Walter de Gruyter • Berlin • New York. DOI 10.1515/HC.2010.016 Preliminary Communication The oxidation of secondary alcohols by dimethyldioxirane: re-examination of kinetic isotope effects A lfons L. Baumstark *, P edro C. Vasquez, Mark 1991 ; Denmark and Wu , 1998 ; Frohn et al. , 1998 ) or in an Cunningham a and Pamela M. Leggett-Robinson b isolated solution (Murray and Jeyaraman , 1985 ; Baumstark and McCloskey , 1987 ). The epoxidation of alkenes and het- Department of Chemistry , Center for Biotech and Drug eroatom oxidation by isolated solutions of 1 in acetone have Design, Georgia State University, Atlanta, Georgia been extensively investigated (Murray and Jeyaraman , 1985 ; 30302-4098 , USA Baumstark and McCloskey , 1987 ; Baumstark and Vasquez , * Corresponding author 1988 ; Winkeljohn et al. , 2004 , 2007 ). Dioxiranes can also e-mail: [email protected] insert oxygen into unactivated CH bonds of alkanes (Murray et al. , 1986 ). However, this important reaction generally requires a dioxirane more reactive than dimethyldioxirane to Abstract be of utility (Kuck et al. , 1994 ; D ’ Accolti et al., 2003 ). The oxidation of secondary alcohols by dimethyldioxirane, 1 , to The kinetic isotope effects for the oxidation of a series of ketones can be achieved in high yield under mild conditions deuterated isopropanols and α -trideuteromethyl benzyl alco- and with convenient reaction times (Kovac and Baumstark , hol by dimethyldioxirane ( 1 ) to the corresponding ketones 1994 ; Cunningham et al. , 1998; Baumstark, 1999 ). Two were determined in dried acetone at 23 ° C. A primary kinetic mechanistic extremes have been proposed for secondary alco- isotope effect (PKIE) of 5.2 for the oxidation of isopropyl- hol oxidation by 1 : a) concerted insertion (Mello et al. -
Cholesteryl Ester Hydroperoxide Formation in Myoglobin-Catalyzed
Biochemical Pharmacology, Vol. 55, pp. 333–340, 1998. ISSN 0006-2952/98/$19.00 1 0.00 © 1998 Elsevier Science Inc. All rights reserved. PII S0006-2952(97)00470-X Cholesteryl Ester Hydroperoxide Formation in Myoglobin-Catalyzed Low Density Lipoprotein Oxidation CONCERTED ANTIOXIDANT ACTIVITY OF CAFFEIC AND P-COUMARIC ACIDS WITH ASCORBATE Otı´lia Vieira,*† Joa˜o Laranjinha,*† Vı´tor Madeira† and Leonor Almeida*† *LABORATORY OF BIOCHEMISTRY,FACULTY OF PHARMACY; AND †CENTER FOR NEUROSCIENCES, UNIVERSITY OF COIMBRA, 3000 COIMBRA,PORTUGAL ABSTRACT. Two diet-derived phenolic acids, caffeic and p-coumaric acids, interplayed with ascorbate in the protection of low density lipoproteins (LDL) from oxidation promoted by ferrylmyoglobin. Ferrylmyoglobin, a two-electron oxidation product from the reaction of metmyoglobin and H2O2, was able to oxidize LDL, degrading free cholesterol and cholesteryl esters. Upon exposure to ferrylmyoglobin, LDL became rapidly depleted of cholesteryl arachidonate and linoleate, which turn into the corresponding hydroperoxides. Cholesteryl oleate and cholesterol were, comparatively, more resistant to oxidation. Caffeic (2 mM) and p-coumaric (12 mM) acids efficiently delayed oxidations, as reflected by an increase in the lag times required for linoleate hydroperoxide and 7-ketocholesterol formation as well as for cholesteryl linoleate consumption. At the same concentration, ascorbate, a standard water-soluble antioxidant, was less efficient than the phenolic acids. Additionally, phenolic acids afforded a protection to LDL that, conversely to ascorbate, extends along the time, as inferred from the high levels of cholesteryl linoleate and cholesteryl arachidonate left after 22 hr of oxidation challenging. Significantly, the coincubation of LDL with ascorbate and each of the phenolic acids resulted in a synergistic protection from oxidation. -
SYNTHESIS and PROPERTIES of SOME ARALKYL Hymoperoxides
SYNTHESIS AND PROPERTIES OF SOME ARALKYL HYmOPEROXIDES DISSERTATION Presented in Partial Fulfillment of the Requirements for the Degree Doctor of Philosophy in the Graduate School of The Ohio State University By ARLO d / bCGGS, B.S., M.S. The Ohio State University 1954 Approved by: Department of Chemistry ACKNOWLEDGEMENT The author wishes to express sincere appreciation to Professor Cecil E. Boord for his advice and counsel during this investigation* Thanks also are due Dr. Kenneth W*. Greenlee for his continual interest and guidance and his cooperation in ex tending the facilities of the American Petroleum Institute Research Project 4-5* The financial support of this work by the Firestone Tire and Rubber Company is gratefully acknowledged* ii TABLE OF CONTENTS Page I. INTRODUCTION................................ 1 II. LITERATURE S URVEY ............... 2 III. STATEMENT OF THE PROBLEM.................... 10 IV. DISCUS5IŒ ........................... 11 A. Methods of Preparing Hydroperoxides .... 12 1. Preparation of hydroperoxides from alcohols ............. 12 a. a-methylbenzyl hydroperoxide ...... 12 b. benzyl hydroperoxide .......... l6 c. cinnamyl and a-phenylallyl hydroperoxides 17 d. 1,2,3,4-tetrahydro-l-naphthyl hydro peroxide ............ 22 e. a-indanyl hydroperoxide ........ 23 f. 0-, m- and p-methylbenzyl hydroperoxides 24 g. m- and p-methoxybenzyl hydroperoxides. 28 h. 1,1-diphenylmethyl hydroperoxide .... 31 i. 1,2-diphenylethyl hydroperoxide .... 32 j. 1-a-naphthyl- and l-J3-naphthylethyl hydroperoxides ........ 33 k. 1-styrylethyl hydroperoxide 35 1. 4-a-dimethylbenzyl and 4-methoxy-a- methylbenzyl hydroperoxides ...... 36 m. a-ethylbenzyl and a-ethyl-p-methylbenzyl hydroperoxides ....... ........ 36 n. a-n-propylbenzyl and a-isopropylbenzyl hydroperoxides .................... 37 0. a-2,5“trimethylbenzyl hydroperoxide . -
Estimating the Densities of Benzene-Derived Explosives Using Atomic Volumes
Journal of Molecular Modeling (2018) 24: 50 https://doi.org/10.1007/s00894-018-3588-9 ORIGINAL PAPER Estimating the densities of benzene-derived explosives using atomic volumes Vikas D. Ghule1 & Ayushi Nirwan1 & Alka Devi1 Received: 7 November 2017 /Accepted: 8 January 2018 /Published online: 9 February 2018 # Springer-Verlag GmbH Germany, part of Springer Nature 2018 Abstract The application of average atomic volumes to predict the crystal densities of benzene-derived energetic compounds of general formula CaHbNcOd is presented, along with the reliability of this method. The densities of 119 neutral nitrobenzenes, energetic salts, and cocrystals with diverse compositions were estimated and compared with experimental data. Of the 74 nitrobenzenes for which direct comparisons could be made, the % error in the estimated density was within 0–3% for 54 compounds, 3–5% for 12 compounds, and 5–8% for the remaining 8 compounds. Among 45 energetic salts and cocrystals, the % error in the estimated density was within 0–3% for 25 compounds, 3–5% for 13 compounds, and 5–7.4% for 7 compounds. The absolute error surpassed 0.05 g/cm3 for 27 of the 119 compounds (22%). The largest errors occurred for compounds containing fused rings and for compounds with three –NH2 or –OH groups. Overall, the present approach for estimating the densities of benzene- derived explosives with different functional groups was found to be reliable. Keywords Density . Atomic volume . Explosive . Group additivity method . Energetic salts Introduction providing that the density and heat of formation values fed into the formula are reliable. The synthesis or hypothetical design of new explosive com- The purpose of the work reported in the present paper was to pounds requires the evaluation of various molecular and energet- develop a simple and straightforward correlation for predicting ic properties in order to select promising molecules. -
Indiana State University ISU Laboratory Safety Guideline
ISU Laboratory Safety Guideline Working with Organic Peroxides and Storage Guidelines Date: December 2012 Indiana State University Organic peroxide is a compound containing the -O-O- structure and is considered a structural derivative of hydrogen peroxide. Organic peroxides are one of the most hazardous materials handled in the laboratory. These peroxides are low powered explosives that are sensitive to shock, sparks or other accidental ignition due to the weak –O-O bond. Organic compounds such as ethers can react with oxygen to form unstable peroxides. Peroxide formation can also occur under normal storage conditions when compounds become concentrated by evaporation or when mixed with other compounds. Types of Compounds known to form peroxides : Ethers containing primary and secondary alkyl groups (never distill an ether before it has been shown to be free of peroxide) Compounds containing benzylic hydrogens Compounds containing allylic hydrogens (C=C-CH) Compounds containing a tertiary C-H group (e.g., decalin and 2,5-dimethlyhexane) Compounds containing conjugated, polyunsaturated alkenes and alkynes (e.g., 1,3-butadiene, vinyl acetylene) Compounds containing secondary or tertiary C-H groups adjacent to an amide (e.g., 1-methyl-2- pyrrolidinone Prudent Practices in the Laboratory: Handling and Management of Chemical Hazards, Updated Version General Procedures for working with Peroxide-forming chemicals: • Be aware of the use of peroxide-forming chemicals when designing or conducting a new experiment. • If possible, purchase material containing an inhibitor such as butylated hydroxytoluene (BHT). • Date the container when received, opened and tested. • Consult Prudent Practices or other resources for storage shelf-life and testing procedures. -
Chemistry 301-301A - Hour Examination #3, December 11, 2003
Chemistry 301-301A - Hour Examination #3, December 11, 2003 “.....as we know, there are known unknowns; there are things we know we know. We also know there are known unknowns; that is to say we know there are some things we do not know. But there are also unknown unknowns - the ones we don't know we don't know.” Donald Rumsfeld (winner of a British award given to the worst mangler of the English language in 2003) “I know, a proof is a proof. What kind of a proof is a proof? A proof is a proof and when you have a good proof it's because it's proven." Jean Chrétien (hon. mention for the same award) 1[18 points] (a) Acid-catalyzed addition of water to 3-methyl-1-butene (1) results in formation of large amounts of a rearranged alcohol (2), in addition to the expected alcohol (3). Explain, with excellent arrow formalisms. H2O + H O+ 3 OH OH 1 3 2 (b) On the other hand hydroboration of 1, followed by oxidation, does not lead to any rearranged product. Only alcohol 4 is formed. Explain. Detailed mechanisms are not needed here, but a drawing of the transition state for the hydroboration step is. 1. BH3 OH 2. HOOH/HO – 1 4 (c) But there are some strange things that happen in hydroboration. For example when 2-methyl-2-butene (5) is hydroborated at high temperature, then treated with HOOH/HO–, alcohol 4 is still one of the products. Explain mechanistcally. Hint: at high temperature hydroboration is reversible. -
A Thiocyanopalladation/Carbocyclization Transformation Identified Through Enzymatic Screening
Chemical Science View Article Online EDGE ARTICLE View Journal | View Issue A thiocyanopalladation/carbocyclization transformation identified through enzymatic Cite this: Chem. Sci.,2017,8,8050 screening: stereocontrolled tandem C–SCN and C–C bond formation† G. Malik,‡ R. A. Swyka,‡ V. K. Tiwari, X. Fei, G. A. Applegate and D. B. Berkowitz * Herein we describe a formal thiocyanopalladation/carbocyclization transformation and its parametrization and optimization using a new elevated temperature plate-based version of our visual colorimetric enzymatic screening method for reaction discovery. The carbocyclization step leads to C–SCN bond formation in tandem with C–C bond construction and is highly stereoselective, showing nearly absolute 1,2-anti-stereoinduction (5 examples) for substrates bearing allylic substitution, and nearly absolute 1,3- syn-stereoinduction (16 examples) for substrates bearing propargylic substitution. Based upon these high levels of stereoinduction, the dependence of the 1,2-stereoinduction upon cyclization substrate Creative Commons Attribution-NonCommercial 3.0 Unported Licence. geometry, and the generally high preference for the transoid vinyl thiocyanate alkene geometry, a mechanistic model is proposed, involving (i) Pd(II)-enyne coordination, (ii) thiocyanopalladation, (iii) migratory insertion and (iv) b-elimination. Examples of transition metal-mediated C–SCN bond formation that proceed smoothly on unactivated substrates and allow for preservation of the SCN moiety are lacking. Yet, the thiocyanate functionality -
Peroxide-Forming Chemicals
Peroxide-Forming Chemicals 4 Ways to stop explosions, injuries, and added expenses: 1) Track shelf life A) label when tested and when to retest B) date when received 2) Handle with proper personal protective equipment A) gloves B) googles/safety glasses C) flame-resistant lab coat D) training E) Ask [the Dept. of Chemistry and Dept. of Environmental Health & Safety] for help 3) Store properly A) flammable storage cabinet if applicable B) avoid i) heat (keep in a cool place) ii) impact iii) friction iv) light (keep in a dark place) 4) Buy the right amount A) based on what will be used B) reduce the disposal of any un-used material (Dubiel). The Department of Chemistry wants you to learn from our experiences. Amides, Dioxane, Ethers, secondary alcohols, and Tetrahydrofuran (as well as other cyclic ethers) must be checked for peroxides. The University of Pittsburgh Department of Environmental Health and Safety (EH&S) recommends that all peroxide-forming chemicals should be tested every six months for peroxide content, and any chemicals that test positive should either be purified before use to remove the peroxide or discarded as chemical waste and replaced with fresh material. (http://www.ehs.pitt.edu/assets/docs/peroxide-forming.pdf). Ken Migliorese, a previous staff member, emailed the Department of Chemistry to remind us of the importance of doing peroxide testing on a regular basis. The need to test for peroxides was made clear to us by a series of unfortunate explosions which occurred in the undergraduate organic teaching labs in 2008. We had multiple defective layers of protection that caused failures of safety measures and three catastrophic errors (Reason). -
Peroxide Forming Chemicals
What are organic peroxides? Organic peroxides are a class of compounds that have unusual stability problems that make them among the most hazardous substances found in the laboratory. The lack of stability is due to the presence of an oxidation and reduction center within the same molecule. R-O-O-R R = organic side chains O-O = Peroxo bridge As a class, organic peroxides are considered to be powerful explosives and are sensitive to heat, friction, impact, light, as well as to strong oxidizing and reducing agents. Peroxide formers react with oxygen even at low concentrations to form peroxy compounds. Autoxidation of organic material proceeds by a free-radical chain mechanism and commonly affects organic solvents. R-H R- R-O-O R-O-O-R (In the presence of oxygen) The instability of the molecule (R-O-O-R) can cause auto-decomposition simply by bumping or jarring the container, addition of heat, light, or opening the cap. The risk associated with the peroxide increases if the peroxide crystallizes or becomes concentrated by evaporation or distillation. Peroxide crystals may form on the container plug or the threads of the cap and detonate as a result of twisting the lid. Classes of Peroxide Formers Aldehydes Ethers - especially cyclic ethers and those containing primary and secondary alcohol groups Compounds containing benzylic hydrogen atoms (particularly if the hydrogens are on tertiary carbon atoms) Compounds containing the allylic structure, including most alkenes. Vinyl and vinylidene compounds. Preventing Formation of Organic Peroxides No single method of inhibition of peroxide formation is suitable for all peroxide formers. -
Epoxidations and Hydroperoxidations of A,ß-Unsaturated Ketones
Springer Theses Epoxidations and Hydroperoxidations of a,ß-Unsaturated Ketones An Approach through Asymmetric Organocatalysis Bearbeitet von Corinna Reisinger 1. Auflage 2012. Buch. xvi, 260 S. Hardcover ISBN 978 3 642 28117 4 Format (B x L): 15,5 x 23,5 cm Gewicht: 578 g Weitere Fachgebiete > Chemie, Biowissenschaften, Agrarwissenschaften > Analytische Chemie > Organische Chemie Zu Inhaltsverzeichnis schnell und portofrei erhältlich bei Die Online-Fachbuchhandlung beck-shop.de ist spezialisiert auf Fachbücher, insbesondere Recht, Steuern und Wirtschaft. Im Sortiment finden Sie alle Medien (Bücher, Zeitschriften, CDs, eBooks, etc.) aller Verlage. Ergänzt wird das Programm durch Services wie Neuerscheinungsdienst oder Zusammenstellungen von Büchern zu Sonderpreisen. Der Shop führt mehr als 8 Millionen Produkte. Chapter 2 Background 2.1 Asymmetric Organocatalysis For a long time, the realm of asymmetric catalysis was dominated by metal and biocatalysis. Yet, at the beginning of this century, List’s discovery of the (S)-proline- catalyzed direct asymmetric intermolecular aldol reaction [1] together with the development of an asymmetric Diels–Alder reaction catalyzed by a chiral imidazo- lidinone salt by MacMillan et al. [2] have raised awareness of the potential of purely organic molecules as efficient catalysts for a variety of asymmetric transformations and brought to life the term ‘‘organocatalysis’’ to address this research field (Scheme 2.1). 2.1.1 Historical Development Organocatalysis has a rich background as it is suggested that extraterrestrial, enantiomerically enriched amino acids such as (S)-alanine and (S)-isovaline played a decisive role in the prebiotic formation of key building blocks such as sugars by promoting the self-aldol reaction of glycolaldehydes in water [3]. -
Newly Observed Peroxides and the Water Effect on the Formation And
EGU Journal Logos (RGB) Open Access Open Access Open Access Advances in Annales Nonlinear Processes Geosciences Geophysicae in Geophysics Open Access Open Access Natural Hazards Natural Hazards and Earth System and Earth System Sciences Sciences Discussions Open Access Open Access Atmos. Chem. Phys., 13, 5671–5683, 2013 Atmospheric Atmospheric www.atmos-chem-phys.net/13/5671/2013/ doi:10.5194/acp-13-5671-2013 Chemistry Chemistry © Author(s) 2013. CC Attribution 3.0 License. and Physics and Physics Discussions Open Access Open Access Atmospheric Atmospheric Measurement Measurement Techniques Techniques Discussions Open Access Newly observed peroxides and the water effect on the formation and Open Access removal of hydroxyalkyl hydroperoxides in the ozonolysis of Biogeosciences Biogeosciences isoprene Discussions D. Huang, Z. M. Chen, Y. Zhao, and H. Liang Open Access Open Access State Key Laboratory of Environmental Simulation and Pollution Control, College of Environmental Sciences and Climate Engineering, Peking University, Beijing 100871, China Climate of the Past of the Past Correspondence to: Z. M. Chen ([email protected]) Discussions Received: 5 January 2013 – Published in Atmos. Chem. Phys. Discuss.: 25 February 2013 Open Access Open Access Revised: 4 May 2013 – Accepted: 15 May 2013 – Published: 12 June 2013 Earth System Earth System Dynamics Dynamics Abstract. The ozonolysis of alkenes is considered to be an lows them to become involved in atmospheric chemical pro- Discussions important source of atmospheric peroxides, which serve as cesses, e.g., SOA formation and radical recycling. oxidants, reservoirs of HOx radicals, and components of sec- Open Access ondary organic aerosols (SOAs). Recent laboratory investi- Geoscientific Geoscientific Open Access gations of this reaction identified hydrogen peroxide (H2O2) Instrumentation Instrumentation and hydroxymethyl hydroperoxide (HMHP) in ozonolysis 1 Introduction Methods and Methods and of isoprene. -
The Mechanism of the Baeyer–Villiger Rearrangement: Quantum Chemistry and TST Study Supported by Experimental Kinetic Data†
PAPER www.rsc.org/obc | Organic & Biomolecular Chemistry The mechanism of the Baeyer–Villiger rearrangement: quantum chemistry and TST study supported by experimental kinetic data† J. Raul Alvarez-Idaboy,*a Lino Reyesa and Nelaine Mora-Diezb Received 15th August 2007, Accepted 19th September 2007 First published as an Advance Article on the web 2nd October 2007 DOI: 10.1039/b712608e The mechanism of the Baeyer–Villiger rearrangement is modelled for the reaction of propanone with trifluoroperacetic acid, catalyzed by trifluoroacetic acid in dichloromethane, using three DFT methods (B3LYP, BH&HLYP and MPWB1K) and MP2. These results are refined and used to calculate the overall reaction rate coefficient using conventional Transition State Theory. The excellent agreement between the calculated (1.00 × 10−3 L mol−1 s−1) and the experimental (1.8 × 10−3 L mol−1 s−1)rate coefficients at the MPWB1K level strongly supports the mechanism recently proposed by our group. This DFT method is then used to study the mechanism of a larger system: cyclohexanone + trifluoroperacetic acid, for which a very good agreement between the calculated and the experimental rate coefficients is also found (1.37 and 0.32 L mol−1 s−1, respectively). The modelled mechanism is not ionic but neutral, and consists of two concerted steps. The first one is strongly catalyzed while the second one, the migration step, seems not to be catalyzed for the systems under study. The results of this work could be of interest for understanding other reactions in non-polar solvents for which ionic mechanisms have been assumed.