Instructor: Corrie Kezer Office: RVC HEC 301-F

Microbiology Course Syllabus BI 234 Spring 2015

Phone: (541) 245-7680 E-mail: [email protected]

Website: http://go.roguecc.edu/user/ckezer/bi234

Prerequisites: BI 211; CHEM 104 is highly recommended

Course Description: This course presents a general approach to the study of microorganisms and how they interact with the world as we know it. The goal of this course is to familiarize you with the structure, function, and control of microbes.

Intended Outcomes: Selected ILO Indicator Assessment Methods: Having successfully completed the course the student will be able to: 1. Develop a “problem solving” approach to problems in microbiology 2. Correctly use procedures and equipment found in a microbiology COM3 - Collaborate Assessment rubric for lab effectively to achieve COM3 will be used to 3. Diagram and explain bacterial and course/learning goals. measure student cellular morphology progress toward 4. Identify and understand various mastery of COM3. ways of staining and classifying bacteria 5. Diagram and explain bacterial metabolism, genetics, and recombination 6. Explain the requirements for microbial nutrition and growth. 7. Explain methods and substances used to control the growth of microbes, in the environment and in the body. 8. Diagram and explain viruses, their reproduction, and transmission 9. Describe the human aspects of infection, infectious disease, and epidemiology

Objectives will be met through the following methods of evaluation: 1 1. Lecture Exams: There will be three lecture exams, each worth 100 pts. These exams are not cumulative but previously learned material may be needed to answer questions on the current exam. The exams are tentatively scheduled for: 4/23, 5/14, and 6/11. *

2. Lecture Homework Assignments: You will be given your homework assignments at the beginning of the term. They are case studies that will require some research to answer the questions. You can work at your own pace, but they all must be turned in by the due date, Thursday May 21nd, 2015.**

3. Chapter 9 Take Home Assignment: There will be a take home assignment that will cover the content from Chapter 9. I will not be covering this content during lecture time and this content will not appear on the lecture exams, but the knowledge may be useful in lab situations or as foundational knowledge for subsequent chapters.**

3. Laboratory Quizzes: There will be a total of 9 lab quizzes, each worth 5 points. Quizzes will cover information from the previous lab, but they may also test your familiarity/preparation with the current day’s lab exercises. Quizzes may be completed cooperatively in groups of no larger than two students.***

4. Unknown ID Project: There will be one project to identify an unknown bacterium during our lab sessions. You will be given an unknown culture, and based on the techniques, media, and tests you’ve learned, you will identify the unknown bacterium and generate a poster presentation. More information will be given to you in lab. **

5. Laboratory Practicum: There will be one lab practicum worth 50 points. This practicum will be cumulative to all the techniques and procedures learned throughout the term. You will be able to use your lab manual, so take good detailed notes/observations during lab. ***

*Lecture Exams can only be made up with prior consent of the instructor. Make-up exams will be allowed only if they are arranged prior to the in-class exam and are composed of short answer and essay questions.

**These Assignments will not be accepted late.

***The Lab Quizzes and the Lab Exam CANNOT be made up, no exceptions.

Course Points: Grading Scale:

Lecture Exams (3 @ 100 pts each) 300

Lecture Homework Case Studies (6 @ 10 pts each) 60 100-90% A Exceptional

Chapter 9 Take-Home Assignment (1 @ 25 pts) 25 89-80% B Above Average 79-70% C Average Lab Quizzes (9 @ 5 pts each) 45 69-60% D Below Average Unknown ID Project (1@25 pts) 25 59-0.0% F Failing Lab Practicum (1 @ 50) 50

Total 505

Attendance & Drop Policy: Microbiology is a difficult course. Students who attend class only when they feel like it will have a difficult time succeeding in this course. Students must sign the attendance sheet each day of lecture and lab to document their presence. To receive credit for this course, you must attend no less than 70% of the lab sections. It is the student’s responsibility to make sure the attendance sheet is signed. Office Hours:

2 RVC (HEC 301-F): Monday: 3:00 to 4:00 Tuesday: 3:00 to 4:00 Wednesday: 3:00 to 4:00 Thursday: 3:00 to 4:00 Friday: 1:00 to 2:00

Required Materials: *Bauman, Robert W. 2015, Microbiology, 4th Edition with Diseases by Body System. *Leboffe, Michael J., Pierce, Burton E. Microbiology Laboratory Theory and Application 3rd Ed.. *Safety Goggles. Available for purchase in the RCC bookstore. If you want to purchase goggles outside the RCC bookstore, they must meet the ANSI Standard Z78.1-1989/2003 (Chemical Goggles, Polycarbonate Lens with indirect venting.). If you do not have goggles, you will not be able to stay in the classroom or participate in the lab…NO EXCEPTIONS! *Gloves. You will need at least one pair of gloves per lab period. I would suggest purchasing a box of gloves and bringing it with you to lab, in case you need to change gloves during the lab time. If you do not have gloves, you will not be able to stay in the classroom or participate in the lab…NO EXCEPTIONS!

Student Expectations and Responsibilities: 1. Minimum of 12 hours of focused study outside of class per week. (if you don’t know how to study successfully, or what you are doing is not getting the results you are looking for, see #2). It is your responsibility to cover all the material during your reading and studying time, even if it is not covered in lecture.

2. Talk to me, ask questions, get help, sooner than later. I love talking about biology and science! (I chose it as a career for Pete’s sake!!) Please don’t hesitate to get help, even for what might seem like little things, I want to help you, I want to see everyone do the best they can 

3. Be honest, have integrity…DON’T CHEAT!!! Cheating and plagiarism are violations of the College policy and are considered serious offenses. The Science Department takes all incidents of academic dishonesty seriously and acts accordingly, including a failing grade for the assignment, course or expulsion from the College. See Cheating and Plagiarism Handout.

4. Attend all lab and lecture classes, ready to learn and apply new material. Come to class prepared (homework done, have materials, appropriate reading done, etc.) and on time. If you arrive late, please be seated quietly and do not approach the front of the room when class is in session. If you need to leave early, please let me know, and take a seat near a door, so you can leave quietly.

5. Be prepared to think critically (examine, analyze, summarize, apply, make connections and see relationships), and challenge yourself!! This class is hard, but how GREAT will you feel when you “get it”?

6. Be realistic with yourself about your obligations and responsibilities…time management. Don’t expect perfect scores if you are taking 16 credits, have a full time job, and a family. This class requires a lot of time (see #1) and mental effort (see #5), so stay realistic with yourself, set reasonable goals.

7. Please turn cell phones and pagers to silent or vibrate mode when in lecture, lab, and especially while taking or reviewing exams. A score of zero on the exam will be given for violations of this policy. If you bring in a laptop, use it only for class related work. If you plan on recording lecture, make sure you have your recorder ready to go before class begins, do not come to the front of the room during lecture to tend to your device.

8. It is each student’s responsibility to be aware of all college procedures, such as how to add, drop, or withdraw for class, and the available student’s services. For more information, refer to the Student Handbook, Schedule of Classes, and the Student Rights, Freedoms, and Responsibilities Statement.

**If you don’t think you can meet (or try to meet) these expectations, then no matter what I do in the classroom, you probably won’t do so well in this class.**

Students with Disabilities: 3 Any student who feels that she or he may need an academic accommodation for any disability; such as vision, hearing, orthopedic, learning disabilities, psychological or other medical conditions, should make an appointment with the Support Services Office. (Located in the Wiseman Tutoring Center on the Redwood Campus or G-207 on the Riverside Campus.)

Studying: Microbiology is a challenging and involved study which requires a considerable effort on the part of the student. Students should review their notes and do their reading daily. Nothing can take the place of good study habits. The following is a list of helpful hints that may assist you:

1. Make time to study for Microbiology. 2. Read the text before the material is covered in class. 3. While reading, if you do not understand something in the text, put a question mark next to it. If lecture does not clear it up, ASK QUESTIONS! 4. Write down new or difficult words on 3X5 cards with the definitions or concepts on the back. Carry the cards with you – use flash cards. 5. Carefully study diagrams and illustrations. 6. Use markers to highlight or underline key ideas while reading. 7. Summarize what you have read. After finishing a paragraph try and restate the main ideas in your own words. 8. Form study groups with your classmates and friends. 9. Tape record lectures for further review and to fill in your notes. 10. Take good notes! 11. Review constantly. Do the reading, flash cards, and review question on a daily basis. DO NOT CRAM FOR EXAMS! 12. Answer the review questions at the end of the chapter. 13. Use visual memory, try and build a visual picture or mental model of what is discussed or read. 14. Use mnemonic devices to help you remember material. Make up your own, humor helps. 15. Always ask why. Dive deeper into the topics to find connections and relationships.

Please come and see me for help, I will do what I can to help you succeed.

Questions you should ask yourself EVERY DAY:

1. Do I know what will be covered in lecture/lab today? 2. Have I read the textbook/lab book sections that correspond to lecture/lab? 3. Have I re-read topics that are giving me trouble? 4. Have I asked for help and/or clarification for these topics? 5. Have I reviewed the material I covered yesterday? Two days ago? Last week? 6. Have I tried to summarize what I am learning in my own words, without looking at notes or book?

4 Schedule of Lecture Topics:

Date Lecture Topic Reading 3/31 Introduction/Classification/History 1 (2-22) Week 1 3 (56-76, 4/2 Cell Structure and Function 85-90) 3 (56-76, 4/7 Cell Structure and Function Week 2 85-90) 4/9 Microscopy and Staining; General Classification 4 (96-122) 4/14 Survey of Archaea and Bacteria 11 (322-348) Week 3 5 (126-128) 4/16 Microbial Metabolism (134-161) 5 (126-128) 4/21 Microbial Metabolism Week 4 (134-161) 4/23 Lecture Exam I 1, 3, 4, 5, 11 4/28 Microbial Nutrition and Growth 6 (166-192) Week 5 4/30 Microbial Nutrition and Growth 6 (166-192) 7 (197-199) 5/5 Microbial Genetics (215-236) Week 6 7 (197-199) 5/7 Microbial Genetics (215-236) 5/12 Recombinant DNA Technology 8 (242-249) Week 7 5/14 Lecture Exam II 6, 7, 8 5/19 Controlling Microbial Growth: Body 10 (289-318) Week 8 5/21 Controlling Microbial Growth: Body *Homework Due* 10 (286-318) 5/26 Viruses, Viroids, Prions 13 (387-411) Week 9 5/28 Viruses, Viroids, Prions 13 (387-411) 6/2 Infection, Infectious Diseases, Epidemiology 14 (415-445) Week 10 6/4 Infection, Infectious Diseases, Epidemiology 14 (415-445) 6/9 Immunization 17 (505-511) Week 11 6/11 Lecture Exam III 10, 13, 14, 17

*Students are responsible for announced changes in the course syllabus*