The Drawing of Configurations
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Networkx Tutorial
5.03.2020 tutorial NetworkX tutorial Source: https://github.com/networkx/notebooks (https://github.com/networkx/notebooks) Minor corrections: JS, 27.02.2019 Creating a graph Create an empty graph with no nodes and no edges. In [1]: import networkx as nx In [2]: G = nx.Graph() By definition, a Graph is a collection of nodes (vertices) along with identified pairs of nodes (called edges, links, etc). In NetworkX, nodes can be any hashable object e.g. a text string, an image, an XML object, another Graph, a customized node object, etc. (Note: Python's None object should not be used as a node as it determines whether optional function arguments have been assigned in many functions.) Nodes The graph G can be grown in several ways. NetworkX includes many graph generator functions and facilities to read and write graphs in many formats. To get started though we'll look at simple manipulations. You can add one node at a time, In [3]: G.add_node(1) add a list of nodes, In [4]: G.add_nodes_from([2, 3]) or add any nbunch of nodes. An nbunch is any iterable container of nodes that is not itself a node in the graph. (e.g. a list, set, graph, file, etc..) In [5]: H = nx.path_graph(10) file:///home/szwabin/Dropbox/Praca/Zajecia/Diffusion/Lectures/1_intro/networkx_tutorial/tutorial.html 1/18 5.03.2020 tutorial In [6]: G.add_nodes_from(H) Note that G now contains the nodes of H as nodes of G. In contrast, you could use the graph H as a node in G. -
Networkx: Network Analysis with Python
NetworkX: Network Analysis with Python Salvatore Scellato Full tutorial presented at the XXX SunBelt Conference “NetworkX introduction: Hacking social networks using the Python programming language” by Aric Hagberg & Drew Conway Outline 1. Introduction to NetworkX 2. Getting started with Python and NetworkX 3. Basic network analysis 4. Writing your own code 5. You are ready for your project! 1. Introduction to NetworkX. Introduction to NetworkX - network analysis Vast amounts of network data are being generated and collected • Sociology: web pages, mobile phones, social networks • Technology: Internet routers, vehicular flows, power grids How can we analyze this networks? Introduction to NetworkX - Python awesomeness Introduction to NetworkX “Python package for the creation, manipulation and study of the structure, dynamics and functions of complex networks.” • Data structures for representing many types of networks, or graphs • Nodes can be any (hashable) Python object, edges can contain arbitrary data • Flexibility ideal for representing networks found in many different fields • Easy to install on multiple platforms • Online up-to-date documentation • First public release in April 2005 Introduction to NetworkX - design requirements • Tool to study the structure and dynamics of social, biological, and infrastructure networks • Ease-of-use and rapid development in a collaborative, multidisciplinary environment • Easy to learn, easy to teach • Open-source tool base that can easily grow in a multidisciplinary environment with non-expert users -
Robot Vision: Projective Geometry
Robot Vision: Projective Geometry Ass.Prof. Friedrich Fraundorfer SS 2018 1 Learning goals . Understand homogeneous coordinates . Understand points, line, plane parameters and interpret them geometrically . Understand point, line, plane interactions geometrically . Analytical calculations with lines, points and planes . Understand the difference between Euclidean and projective space . Understand the properties of parallel lines and planes in projective space . Understand the concept of the line and plane at infinity 2 Outline . 1D projective geometry . 2D projective geometry ▫ Homogeneous coordinates ▫ Points, Lines ▫ Duality . 3D projective geometry ▫ Points, Lines, Planes ▫ Duality ▫ Plane at infinity 3 Literature . Multiple View Geometry in Computer Vision. Richard Hartley and Andrew Zisserman. Cambridge University Press, March 2004. Mundy, J.L. and Zisserman, A., Geometric Invariance in Computer Vision, Appendix: Projective Geometry for Machine Vision, MIT Press, Cambridge, MA, 1992 . Available online: www.cs.cmu.edu/~ph/869/papers/zisser-mundy.pdf 4 Motivation – Image formation [Source: Charles Gunn] 5 Motivation – Parallel lines [Source: Flickr] 6 Motivation – Epipolar constraint X world point epipolar plane x x’ x‘TEx=0 C T C’ R 7 Euclidean geometry vs. projective geometry Definitions: . Geometry is the teaching of points, lines, planes and their relationships and properties (angles) . Geometries are defined based on invariances (what is changing if you transform a configuration of points, lines etc.) . Geometric transformations -
Binomial Partial Steiner Triple Systems Containing Complete Graphs
Graphs and Combinatorics DOI 10.1007/s00373-016-1681-3 ORIGINAL PAPER Binomial partial Steiner triple systems containing complete graphs Małgorzata Pra˙zmowska1 · Krzysztof Pra˙zmowski2 Received: 1 December 2014 / Revised: 25 January 2016 © The Author(s) 2016. This article is published with open access at Springerlink.com Abstract We propose a new approach to studies on partial Steiner triple systems con- sisting in determining complete graphs contained in them. We establish the structure which complete graphs yield in a minimal PSTS that contains them. As a by-product we introduce the notion of a binomial PSTS as a configuration with parameters of a minimal PSTS with a complete subgraph. A representation of binomial PSTS with at least a given number of its maximal complete subgraphs is given in terms of systems of perspectives. Finally, we prove that for each admissible integer there is a binomial PSTS with this number of maximal complete subgraphs. Keywords Binomial configuration · Generalized Desargues configuration · Complete graph Mathematics Subject Classification 05B30 · 05C51 · 05B40 1 Introduction In the paper we investigate the structure which (may) yield complete graphs contained in a (partial) Steiner triple system (in short: in a PSTS). Our problem is, in fact, a particular instance of a general question, investigated in the literature, which STS’s B Małgorzata Pra˙zmowska [email protected] Krzysztof Pra˙zmowski [email protected] 1 Faculty of Mathematics and Informatics, University of Białystok, ul. Ciołkowskiego 1M, 15-245 Białystok, Poland 2 Institute of Mathematics, University of Białystok, ul. Ciołkowskiego 1M, 15-245 Białystok, Poland 123 Graphs and Combinatorics (more generally: which PSTS’s) contain/do not contain a configuration of a prescribed type. -
COMBINATORICS, Volume
http://dx.doi.org/10.1090/pspum/019 PROCEEDINGS OF SYMPOSIA IN PURE MATHEMATICS Volume XIX COMBINATORICS AMERICAN MATHEMATICAL SOCIETY Providence, Rhode Island 1971 Proceedings of the Symposium in Pure Mathematics of the American Mathematical Society Held at the University of California Los Angeles, California March 21-22, 1968 Prepared by the American Mathematical Society under National Science Foundation Grant GP-8436 Edited by Theodore S. Motzkin AMS 1970 Subject Classifications Primary 05Axx, 05Bxx, 05Cxx, 10-XX, 15-XX, 50-XX Secondary 04A20, 05A05, 05A17, 05A20, 05B05, 05B15, 05B20, 05B25, 05B30, 05C15, 05C99, 06A05, 10A45, 10C05, 14-XX, 20Bxx, 20Fxx, 50A20, 55C05, 55J05, 94A20 International Standard Book Number 0-8218-1419-2 Library of Congress Catalog Number 74-153879 Copyright © 1971 by the American Mathematical Society Printed in the United States of America All rights reserved except those granted to the United States Government May not be produced in any form without permission of the publishers Leo Moser (1921-1970) was active and productive in various aspects of combin• atorics and of its applications to number theory. He was in close contact with those with whom he had common interests: we will remember his sparkling wit, the universality of his anecdotes, and his stimulating presence. This volume, much of whose content he had enjoyed and appreciated, and which contains the re• construction of a contribution by him, is dedicated to his memory. CONTENTS Preface vii Modular Forms on Noncongruence Subgroups BY A. O. L. ATKIN AND H. P. F. SWINNERTON-DYER 1 Selfconjugate Tetrahedra with Respect to the Hermitian Variety xl+xl + *l + ;cg = 0 in PG(3, 22) and a Representation of PG(3, 3) BY R. -
Graphprism: Compact Visualization of Network Structure
GraphPrism: Compact Visualization of Network Structure Sanjay Kairam, Diana MacLean, Manolis Savva, Jeffrey Heer Stanford University Computer Science Department {skairam, malcdi, msavva, jheer}@cs.stanford.edu GraphPrism Connectivity ABSTRACT nodeRadius 7.9 strokeWidth 1.12 charge -242 Visual methods for supporting the characterization, com- gravity 0.65 linkDistance 20 parison, and classification of large networks remain an open Transitivity updateGraph Close Controls challenge. Ideally, such techniques should surface useful 0 node(s) selected. structural features { such as effective diameter, small-world properties, and structural holes { not always apparent from Density either summary statistics or typical network visualizations. In this paper, we present GraphPrism, a technique for visu- Conductance ally summarizing arbitrarily large graphs through combina- tions of `facets', each corresponding to a single node- or edge- specific metric (e.g., transitivity). We describe a generalized Jaccard approach for constructing facets by calculating distributions of graph metrics over increasingly large local neighborhoods and representing these as a stacked multi-scale histogram. MeetMin Evaluation with paper prototypes shows that, with minimal training, static GraphPrism diagrams can aid network anal- ysis experts in performing basic analysis tasks with network Created by Sanjay Kairam. Visualization using D3. data. Finally, we contribute the design of an interactive sys- Figure 1: GraphPrism and node-link diagrams for tem using linked selection between GraphPrism overviews the largest component of a co-authorship graph. and node-link detail views. Using a case study of data from a co-authorship network, we illustrate how GraphPrism fa- compactly summarizing networks of arbitrary size. Graph- cilitates interactive exploration of network data. -
Graph Simplification and Interaction
Graph Clarity, Simplification, & Interaction http://i.imgur.com/cW19IBR.jpg https://www.reddit.com/r/CableManagement/ Today • Today’s Reading: Lombardi Graphs – Bezier Curves • Today’s Reading: Clustering/Hierarchical edge Bundling – Definition of Betweenness Centrality • Emergency Management Graph Visualization – Sean Kim’s masters project • Reading for Tuesday & Homework 3 • Graph Interaction Brainstorming Exercise "Lombardi drawings of graphs", Duncan, Eppstein, Goodrich, Kobourov, Nollenberg, Graph Drawing 2010 • Circular arcs • Perfect angular resolution (edges for equal angles at vertices) • Arcs only intersect 2 vertices (at endpoints) • (not required to be crossing free) • Vertices may be constrained to lie on circle or concentric circles • People are more patient with aesthetically pleasing graphs (will spend longer studying to learn/draw conclusions) • What about relaxing the circular arc requirement and allowing Bezier arcs? • How does it scale to larger data? • Long curved arcs can be much harder to follow • Circular layout of nodes is often very good! • Would like more pseudocode Cubic Bézier Curve • 4 control points • Curve passes through first & last control point • Curve is tangent at P0 to (P1-P0) and at P3 to (P3-P2) http://www.e-cartouche.ch/content_reg/carto http://www.webreference.com/dla uche/graphics/en/html/Curves_learningObject b/9902/bezier.html 2.html “Force-directed Lombardi-style graph drawing”, Chernobelskiy et al., Graph Drawing 2011. • Relaxation of the Lombardi Graph requirements • “straight-line segments -
Constraint Graph Drawing
Constrained Graph Drawing Dissertation zur Erlangung des akademischen Grades des Doktors der Naturwissenschaften vorgelegt von Barbara Pampel, geb. Schlieper an der Universit¨at Konstanz Mathematisch-Naturwissenschaftliche Sektion Fachbereich Informatik und Informationswissenschaft Tag der mundlichen¨ Prufung:¨ 14. Juli 2011 1. Referent: Prof. Dr. Ulrik Brandes 2. Referent: Prof. Dr. Michael Kaufmann II Teile dieser Arbeit basieren auf Ver¨offentlichungen, die aus der Zusammenar- beit mit anderen Wissenschaftlerinnen und Wissenschaftlern entstanden sind. Zu allen diesen Inhalten wurden wesentliche Beitr¨age geleistet. Kapitel 3 (Bachmaier, Brandes, and Schlieper, 2005; Brandes and Schlieper, 2009) Kapitel 4 (Brandes and Pampel, 2009) Kapitel 6 (Brandes, Cornelsen, Pampel, and Sallaberry, 2010b) Zusammenfassung Netzwerke werden in den unterschiedlichsten Forschungsgebieten zur Repr¨asenta- tion relationaler Daten genutzt. Durch geeignete mathematische Methoden kann man diese Netzwerke als Graphen darstellen. Ein Graph ist ein Gebilde aus Kno- ten und Kanten, welche die Knoten verbinden. Hierbei k¨onnen sowohl die Kan- ten als auch die Knoten weitere Informationen beinhalten. Diese Informationen k¨onnen den einzelnen Elementen zugeordnet sein, sich aber auch aus Anordnung und Verteilung der Elemente ergeben. Mit Algorithmen (strukturierten Reihen von Arbeitsanweisungen) aus dem Gebiet des Graphenzeichnens kann man die unterschiedlichsten Informationen aus verschiedenen Forschungsbereichen visualisieren. Graphische Darstellungen k¨onnen das -
Performance Evaluation of Genetic Algorithm and Simulated Annealing in Solving Kirkman Schoolgirl Problem
FUOYE Journal of Engineering and Technology (FUOYEJET), Vol. 5, Issue 2, September 2020 ISSN: 2579-0625 (Online), 2579-0617 (Paper) Performance Evaluation of Genetic Algorithm and Simulated Annealing in solving Kirkman Schoolgirl Problem *1Christopher A. Oyeleye, 2Victoria O. Dayo-Ajayi, 3Emmanuel Abiodun and 4Alabi O. Bello 1Department of Information Systems, Ladoke Akintola University of Technology, Ogbomoso, Nigeria 2Department of Computer Science, Ladoke Akintola University of Technology, Ogbomoso, Nigeria 3Department of Computer Science, Kwara State Polytechnic, Ilorin, Nigeria 4Department of Mathematical and Physical Sciences, Afe Babalola University, Ado-Ekiti, Nigeria [email protected]|[email protected]|[email protected]|[email protected] Received: 15-FEB-2020; Reviewed: 12-MAR-2020; Accepted: 28-MAY-2020 http://dx.doi.org/10.46792/fuoyejet.v5i2.477 Abstract- This paper provides performance evaluation of Genetic Algorithm and Simulated Annealing in view of their software complexity and simulation runtime. Kirkman Schoolgirl is about arranging fifteen schoolgirls into five triplets in a week with a distinct constraint of no two schoolgirl must walk together in a week. The developed model was simulated using MATLAB version R2015a. The performance evaluation of both Genetic Algorithm (GA) and Simulated Annealing (SA) was carried out in terms of program size, program volume, program effort and the intelligent content of the program. The results obtained show that the runtime for GA and SA are 11.23sec and 6.20sec respectively. The program size for GA and SA are 2.01kb and 2.21kb, respectively. The lines of code for GA and SA are 324 and 404, respectively. The program volume for GA and SA are 1121.58 and 3127.92, respectively. -
Chapter 18 Spectral Graph Drawing
Chapter 18 Spectral Graph Drawing 18.1 Graph Drawing and Energy Minimization Let G =(V,E)besomeundirectedgraph.Itisoftende- sirable to draw a graph, usually in the plane but possibly in 3D, and it turns out that the graph Laplacian can be used to design surprisingly good methods. n Say V = m.Theideaistoassignapoint⇢(vi)inR to the vertex| | v V ,foreveryv V ,andtodrawaline i 2 i 2 segment between the points ⇢(vi)and⇢(vj). Thus, a graph drawing is a function ⇢: V Rn. ! 821 822 CHAPTER 18. SPECTRAL GRAPH DRAWING We define the matrix of a graph drawing ⇢ (in Rn) as a m n matrix R whose ith row consists of the row vector ⇥ n ⇢(vi)correspondingtothepointrepresentingvi in R . Typically, we want n<m;infactn should be much smaller than m. Arepresentationisbalanced i↵the sum of the entries of every column is zero, that is, 1>R =0. If a representation is not balanced, it can be made bal- anced by a suitable translation. We may also assume that the columns of R are linearly independent, since any basis of the column space also determines the drawing. Thus, from now on, we may assume that n m. 18.1. GRAPH DRAWING AND ENERGY MINIMIZATION 823 Remark: Agraphdrawing⇢: V Rn is not required to be injective, which may result in! degenerate drawings where distinct vertices are drawn as the same point. For this reason, we prefer not to use the terminology graph embedding,whichisoftenusedintheliterature. This is because in di↵erential geometry, an embedding always refers to an injective map. The term graph immersion would be more appropriate. -
Blocking Set Free Configurations and Their Relations to Digraphs and Hypergraphs
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by Elsevier - Publisher Connector DISCRETE MATHEMATICS ELSIZI’IER Discrete Mathematics 1651166 (1997) 359.-370 Blocking set free configurations and their relations to digraphs and hypergraphs Harald Gropp* Mihlingstrasse 19. D-69121 Heidelberg, German> Abstract The current state of knowledge concerning the existence of blocking set free configurations is given together with a short history of this problem which has also been dealt with in terms of digraphs without even dicycles or 3-chromatic hypergraphs. The question is extended to the case of nonsymmetric configurations (u,, b3). It is proved that for each value of I > 3 there are only finitely many values of u for which the existence of a blocking set free configuration is still unknown. 1. Introduction In the language of configurations the existence of blocking sets was investigated in [3, 93 for the first time. Further papers [4, 201 yielded the result that the existence problem for blocking set free configurations v3 has been nearly solved. There are only 8 values of v for which it is unsettled whether there is a blocking set free configuration ~7~:u = 15,16,17,18,20,23,24,26. The existence of blocking set free configurations is equivalent to the existence of certain hypergraphs and digraphs. In these two languages results have been obtained much earlier. In Section 2 the relations between configurations, hypergraphs, and digraphs are exhibited. Furthermore, a nearly forgotten result of Steinitz is described In his dissertation of 1894 Steinitz proved the existence of a l-factor in a regular bipartite graph 20 years earlier then Kiinig. -
Second Edition Volume I
Second Edition Thomas Beth Universitat¨ Karlsruhe Dieter Jungnickel Universitat¨ Augsburg Hanfried Lenz Freie Universitat¨ Berlin Volume I PUBLISHED BY THE PRESS SYNDICATE OF THE UNIVERSITY OF CAMBRIDGE The Pitt Building, Trumpington Street, Cambridge, United Kingdom CAMBRIDGE UNIVERSITY PRESS The Edinburgh Building, Cambridge CB2 2RU, UK www.cup.cam.ac.uk 40 West 20th Street, New York, NY 10011-4211, USA www.cup.org 10 Stamford Road, Oakleigh, Melbourne 3166, Australia Ruiz de Alarc´on 13, 28014 Madrid, Spain First edition c Bibliographisches Institut, Zurich, 1985 c Cambridge University Press, 1993 Second edition c Cambridge University Press, 1999 This book is in copyright. Subject to statutory exception and to the provisions of relevant collective licensing agreements, no reproduction of any part may take place without the written permission of Cambridge University Press. First published 1999 Printed in the United Kingdom at the University Press, Cambridge Typeset in Times Roman 10/13pt. in LATEX2ε[TB] A catalogue record for this book is available from the British Library Library of Congress Cataloguing in Publication data Beth, Thomas, 1949– Design theory / Thomas Beth, Dieter Jungnickel, Hanfried Lenz. – 2nd ed. p. cm. Includes bibliographical references and index. ISBN 0 521 44432 2 (hardbound) 1. Combinatorial designs and configurations. I. Jungnickel, D. (Dieter), 1952– . II. Lenz, Hanfried. III. Title. QA166.25.B47 1999 5110.6 – dc21 98-29508 CIP ISBN 0 521 44432 2 hardback Contents I. Examples and basic definitions .................... 1 §1. Incidence structures and incidence matrices ............ 1 §2. Block designs and examples from affine and projective geometry ........................6 §3. t-designs, Steiner systems and configurations .........