Cholesterol metabolism all sink node genes ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ●●● ● ● ● ●● ●● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ● ●● ● ● ● ● ● ● ● ● ● ● ●● ● ● ● ● ● ● ● ● ●● ● ● ● ●● ● ● ● ● ● ● ●● ● ● ● ● ● ●●● ● ●● ● ● ● ● ● ● ● ● ● ● ● ● ● ● maximum = 4 maximum = 2 2 1 s>

10 0

0 10 log −1 −2

group 1 group 2 group 3 group 4 group 5 group 6 group 7 group 8 Cholesterol_metabolism genes with data

NCEH1 ABCA1 SOAT1 ABCA1 APOA1

APOA1 APOA1 CD36 LDLR APOC1 LIPG

LCAT LPL LIPC APOC2 PLTP LPL APOH LPA CETP ANGPTL3

APOC1 ANGPTL8 APOA1

APOB ABCA1 SCARB1 SORT1 LDLR LDLRAP1 PCSK9 SORT1 LDLR

MYLIP SORT1

PCSK9 APOE LRP1 PCSK9 LDLR LDLR LRPAP1 LIPA

CYP27A1 STARD3 VDAC1 TSPO STAR NPC2 VDAC1

STARD3 NPC1 VAPB OSBPL5 SORT1 APOB

SOAT1

CYP7A1 ABCB11

ABCG5

APOA1 APOB LPA APOB APOB APOB APOA1 APOB

APOA2 APOB APOE APOC1 APOE APOA2 APOC1

APOC1 APOE APOA4 APOE

APOE Cholesterol_metabolism sink nodes

NCEH1 ABCA1 SOAT1 ABCA1 APOA1

APOA1 APOA1 CD36 LDLR APOC1 LIPG

LCAT LPL LIPC APOC2 PLTP LPL APOH LPA CETP ANGPTL3

APOC1 ANGPTL8 APOA1

APOB ABCA1 SCARB1 SORT1 LDLR LDLRAP1 PCSK9 SORT1 LDLR

MYLIP SORT1

PCSK9 APOE LRP1 PCSK9 LDLR LDLR LRPAP1 LIPA

CYP27A1 STARD3 VDAC1 TSPO STAR NPC2 VDAC1

STARD3 NPC1 VAPB OSBPL5 SORT1 APOB

SOAT1

CYP7A1 ABCB11

ABCG5

APOA1 APOB LPA APOB APOB APOB APOA1 APOB

APOA2 APOB APOE APOC1 APOE APOA2 APOC1

APOC1 APOE APOA4 APOE

APOE Cholesterol_metabolism group 1

NCEH1 ABCA1 SOAT1 ABCA1 APOA1

APOA1 APOA1 CD36 LDLR APOC1 LIPG

LCAT LPL LIPC APOC2 PLTP LPL APOH LPA CETP ANGPTL3

APOC1 ANGPTL8 APOA1

APOB ABCA1 SCARB1 SORT1 LDLR LDLRAP1 PCSK9 SORT1 LDLR

MYLIP SORT1

PCSK9 APOE LRP1 PCSK9 LDLR LDLR LRPAP1 LIPA

CYP27A1 STARD3 VDAC1 TSPO STAR NPC2 VDAC1

STARD3 NPC1 VAPB OSBPL5 SORT1 APOB

SOAT1

CYP7A1 ABCB11

ABCG5

APOA1 APOB LPA APOB APOB APOB APOA1 APOB

APOA2 APOB APOE APOC1 APOE APOA2 APOC1

APOC1 APOE APOA4 APOE

APOE Cholesterol_metabolism group 2

NCEH1 ABCA1 SOAT1 ABCA1 APOA1

APOA1 APOA1 CD36 LDLR APOC1 LIPG

LCAT LPL LIPC APOC2 PLTP LPL APOH LPA CETP ANGPTL3

APOC1 ANGPTL8 APOA1

APOB ABCA1 SCARB1 SORT1 LDLR LDLRAP1 PCSK9 SORT1 LDLR

MYLIP SORT1

PCSK9 APOE LRP1 PCSK9 LDLR LDLR LRPAP1 LIPA

CYP27A1 STARD3 VDAC1 TSPO STAR NPC2 VDAC1

STARD3 NPC1 VAPB OSBPL5 SORT1 APOB

SOAT1

CYP7A1 ABCB11

ABCG5

APOA1 APOB LPA APOB APOB APOB APOA1 APOB

APOA2 APOB APOE APOC1 APOE APOA2 APOC1

APOC1 APOE APOA4 APOE

APOE Cholesterol_metabolism group 3

NCEH1 ABCA1 SOAT1 ABCA1 APOA1

APOA1 APOA1 CD36 LDLR APOC1 LIPG

LCAT LPL LIPC APOC2 PLTP LPL APOH LPA CETP ANGPTL3

APOC1 ANGPTL8 APOA1

APOB ABCA1 SCARB1 SORT1 LDLR LDLRAP1 PCSK9 SORT1 LDLR

MYLIP SORT1

PCSK9 APOE LRP1 PCSK9 LDLR LDLR LRPAP1 LIPA

CYP27A1 STARD3 VDAC1 TSPO STAR NPC2 VDAC1

STARD3 NPC1 VAPB OSBPL5 SORT1 APOB

SOAT1

CYP7A1 ABCB11

ABCG5

APOA1 APOB LPA APOB APOB APOB APOA1 APOB

APOA2 APOB APOE APOC1 APOE APOA2 APOC1

APOC1 APOE APOA4 APOE

APOE Cholesterol_metabolism group 4

NCEH1 ABCA1 SOAT1 ABCA1 APOA1

APOA1 APOA1 CD36 LDLR APOC1 LIPG

LCAT LPL LIPC APOC2 PLTP LPL APOH LPA CETP ANGPTL3

APOC1 ANGPTL8 APOA1

APOB ABCA1 SCARB1 SORT1 LDLR LDLRAP1 PCSK9 SORT1 LDLR

MYLIP SORT1

PCSK9 APOE LRP1 PCSK9 LDLR LDLR LRPAP1 LIPA

CYP27A1 STARD3 VDAC1 TSPO STAR NPC2 VDAC1

STARD3 NPC1 VAPB OSBPL5 SORT1 APOB

SOAT1

CYP7A1 ABCB11

ABCG5

APOA1 APOB LPA APOB APOB APOB APOA1 APOB

APOA2 APOB APOE APOC1 APOE APOA2 APOC1

APOC1 APOE APOA4 APOE

APOE Cholesterol_metabolism group 5

NCEH1 ABCA1 SOAT1 ABCA1 APOA1

APOA1 APOA1 CD36 LDLR APOC1 LIPG

LCAT LPL LIPC APOC2 PLTP LPL APOH LPA CETP ANGPTL3

APOC1 ANGPTL8 APOA1

APOB ABCA1 SCARB1 SORT1 LDLR LDLRAP1 PCSK9 SORT1 LDLR

MYLIP SORT1

PCSK9 APOE LRP1 PCSK9 LDLR LDLR LRPAP1 LIPA

CYP27A1 STARD3 VDAC1 TSPO STAR NPC2 VDAC1

STARD3 NPC1 VAPB OSBPL5 SORT1 APOB

SOAT1

CYP7A1 ABCB11

ABCG5

APOA1 APOB LPA APOB APOB APOB APOA1 APOB

APOA2 APOB APOE APOC1 APOE APOA2 APOC1

APOC1 APOE APOA4 APOE

APOE Cholesterol_metabolism group 6

NCEH1 ABCA1 SOAT1 ABCA1 APOA1

APOA1 APOA1 CD36 LDLR APOC1 LIPG

LCAT LPL LIPC APOC2 PLTP LPL APOH LPA CETP ANGPTL3

APOC1 ANGPTL8 APOA1

APOB ABCA1 SCARB1 SORT1 LDLR LDLRAP1 PCSK9 SORT1 LDLR

MYLIP SORT1

PCSK9 APOE LRP1 PCSK9 LDLR LDLR LRPAP1 LIPA

CYP27A1 STARD3 VDAC1 TSPO STAR NPC2 VDAC1

STARD3 NPC1 VAPB OSBPL5 SORT1 APOB

SOAT1

CYP7A1 ABCB11

ABCG5

APOA1 APOB LPA APOB APOB APOB APOA1 APOB

APOA2 APOB APOE APOC1 APOE APOA2 APOC1

APOC1 APOE APOA4 APOE

APOE Cholesterol_metabolism group 7

NCEH1 ABCA1 SOAT1 ABCA1 APOA1

APOA1 APOA1 CD36 LDLR APOC1 LIPG

LCAT LPL LIPC APOC2 PLTP LPL APOH LPA CETP ANGPTL3

APOC1 ANGPTL8 APOA1

APOB ABCA1 SCARB1 SORT1 LDLR LDLRAP1 PCSK9 SORT1 LDLR

MYLIP SORT1

PCSK9 APOE LRP1 PCSK9 LDLR LDLR LRPAP1 LIPA

CYP27A1 STARD3 VDAC1 TSPO STAR NPC2 VDAC1

STARD3 NPC1 VAPB OSBPL5 SORT1 APOB

SOAT1

CYP7A1 ABCB11

ABCG5

APOA1 APOB LPA APOB APOB APOB APOA1 APOB

APOA2 APOB APOE APOC1 APOE APOA2 APOC1

APOC1 APOE APOA4 APOE

APOE Cholesterol_metabolism group 8

NCEH1 ABCA1 SOAT1 ABCA1 APOA1

APOA1 APOA1 CD36 LDLR APOC1 LIPG

LCAT LPL LIPC APOC2 PLTP LPL APOH LPA CETP ANGPTL3

APOC1 ANGPTL8 APOA1

APOB ABCA1 SCARB1 SORT1 LDLR LDLRAP1 PCSK9 SORT1 LDLR

MYLIP SORT1

PCSK9 APOE LRP1 PCSK9 LDLR LDLR LRPAP1 LIPA

CYP27A1 STARD3 VDAC1 TSPO STAR NPC2 VDAC1

STARD3 NPC1 VAPB OSBPL5 SORT1 APOB

SOAT1

CYP7A1 ABCB11

ABCG5

APOA1 APOB LPA APOB APOB APOB APOA1 APOB

APOA2 APOB APOE APOC1 APOE APOA2 APOC1

APOC1 APOE APOA4 APOE

APOE