Centrality Eigenvector-Based Centrality Miscellanea
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Approximating Network Centrality Measures Using Node Embedding and Machine Learning
Approximating Network Centrality Measures Using Node Embedding and Machine Learning Matheus R. F. Mendon¸ca,Andr´eM. S. Barreto, and Artur Ziviani ∗† Abstract Extracting information from real-world large networks is a key challenge nowadays. For instance, computing a node centrality may become unfeasible depending on the intended centrality due to its computational cost. One solution is to develop fast methods capable of approximating network centralities. Here, we propose an approach for efficiently approximating node centralities for large networks using Neural Networks and Graph Embedding techniques. Our proposed model, entitled Network Centrality Approximation using Graph Embedding (NCA-GE), uses the adjacency matrix of a graph and a set of features for each node (here, we use only the degree) as input and computes the approximate desired centrality rank for every node. NCA-GE has a time complexity of O(jEj), E being the set of edges of a graph, making it suitable for large networks. NCA-GE also trains pretty fast, requiring only a set of a thousand small synthetic scale-free graphs (ranging from 100 to 1000 nodes each), and it works well for different node centralities, network sizes, and topologies. Finally, we compare our approach to the state-of-the-art method that approximates centrality ranks using the degree and eigenvector centralities as input, where we show that the NCA-GE outperforms the former in a variety of scenarios. 1 Introduction Networks are present in several real-world applications spread among different disciplines, such as biology, mathematics, sociology, and computer science, just to name a few. Therefore, network analysis is a crucial tool for extracting relevant information. -
Networkx: Network Analysis with Python
NetworkX: Network Analysis with Python Salvatore Scellato Full tutorial presented at the XXX SunBelt Conference “NetworkX introduction: Hacking social networks using the Python programming language” by Aric Hagberg & Drew Conway Outline 1. Introduction to NetworkX 2. Getting started with Python and NetworkX 3. Basic network analysis 4. Writing your own code 5. You are ready for your project! 1. Introduction to NetworkX. Introduction to NetworkX - network analysis Vast amounts of network data are being generated and collected • Sociology: web pages, mobile phones, social networks • Technology: Internet routers, vehicular flows, power grids How can we analyze this networks? Introduction to NetworkX - Python awesomeness Introduction to NetworkX “Python package for the creation, manipulation and study of the structure, dynamics and functions of complex networks.” • Data structures for representing many types of networks, or graphs • Nodes can be any (hashable) Python object, edges can contain arbitrary data • Flexibility ideal for representing networks found in many different fields • Easy to install on multiple platforms • Online up-to-date documentation • First public release in April 2005 Introduction to NetworkX - design requirements • Tool to study the structure and dynamics of social, biological, and infrastructure networks • Ease-of-use and rapid development in a collaborative, multidisciplinary environment • Easy to learn, easy to teach • Open-source tool base that can easily grow in a multidisciplinary environment with non-expert users -
Measuring Homophily
Measuring Homophily Matteo Cristani, Diana Fogoroasi, and Claudio Tomazzoli University of Verona fmatteo.cristani, diana.fogoroasi.studenti, [email protected] Abstract. Social Network Analysis is employed widely as a means to compute the probability that a given message flows through a social net- work. This approach is mainly grounded upon the correct usage of three basic graph- theoretic measures: degree centrality, closeness centrality and betweeness centrality. We show that, in general, those indices are not adapt to foresee the flow of a given message, that depends upon indices based on the sharing of interests and the trust about depth in knowledge of a topic. We provide new definitions for measures that over- come the drawbacks of general indices discussed above, using Semantic Social Network Analysis, and show experimental results that show that with these measures we have a different understanding of a social network compared to standard measures. 1 Introduction Social Networks are considered, on the current panorama of web applications, as the principal virtual space for online communication. Therefore, it is of strong relevance for practical applications to understand how strong a member of the network is with respect to the others. Traditionally, sociological investigations have dealt with problems of defining properties of the users that can value their relevance (sometimes their impor- tance, that can be considered different, the first denoting the ability to emerge, and the second the relevance perceived by the others). Scholars have developed several measures and studied how to compute them in different types of graphs, used as models for social networks. This field of research has been named Social Network Analysis. -
Modeling Customer Preferences Using Multidimensional Network Analysis in Engineering Design
Modeling customer preferences using multidimensional network analysis in engineering design Mingxian Wang1, Wei Chen1, Yun Huang2, Noshir S. Contractor2 and Yan Fu3 1 Department of Mechanical Engineering, Northwestern University, Evanston, IL 60208, USA 2 Science of Networks in Communities, Northwestern University, Evanston, IL 60208, USA 3 Global Data Insight and Analytics, Ford Motor Company, Dearborn, MI 48121, USA Abstract Motivated by overcoming the existing utility-based choice modeling approaches, we present a novel conceptual framework of multidimensional network analysis (MNA) for modeling customer preferences in supporting design decisions. In the proposed multidimensional customer–product network (MCPN), customer–product interactions are viewed as a socio-technical system where separate entities of `customers' and `products' are simultaneously modeled as two layers of a network, and multiple types of relations, such as consideration and purchase, product associations, and customer social interactions, are considered. We first introduce a unidimensional network where aggregated customer preferences and product similarities are analyzed to inform designers about the implied product competitions and market segments. We then extend the network to a multidimensional structure where customer social interactions are introduced for evaluating social influence on heterogeneous product preferences. Beyond the traditional descriptive analysis used in network analysis, we employ the exponential random graph model (ERGM) as a unified statistical -
RESEARCH PAPER . Text Information Aggregation with Centrality Attention
SCIENCE CHINA Information Sciences . RESEARCH PAPER . Text Information Aggregation with Centrality Attention Jingjing Gong, Hang Yan, Yining Zheng, Qipeng Guo, Xipeng Qiu* & Xuanjing Huang School of Computer Science, Fudan University, Shanghai 200433, China Shanghai Key Laboratory of Intelligent Information Processing, Fudan University, Shanghai 200433, China fjjgong, hyan11, ynzheng15, qpguo16, xpqiu, [email protected] Abstract A lot of natural language processing problems need to encode the text sequence as a fix-length vector, which usually involves aggregation process of combining the representations of all the words, such as pooling or self-attention. However, these widely used aggregation approaches did not take higher-order relationship among the words into consideration. Hence we propose a new way of obtaining aggregation weights, called eigen-centrality self-attention. More specifically, we build a fully-connected graph for all the words in a sentence, then compute the eigen-centrality as the attention score of each word. The explicit modeling of relationships as a graph is able to capture some higher-order dependency among words, which helps us achieve better results in 5 text classification tasks and one SNLI task than baseline models such as pooling, self-attention and dynamic routing. Besides, in order to compute the dominant eigenvector of the graph, we adopt power method algorithm to get the eigen-centrality measure. Moreover, we also derive an iterative approach to get the gradient for the power method process to reduce both memory consumption and computation requirement. Keywords Information Aggregation, Eigen Centrality, Text Classification, NLP, Deep Learning Citation Jingjing Gong, Hang Yan, Yining Zheng, Qipeng Guo, Xipeng Qiu, Xuanjing Huang. -
Katz Centrality for Directed Graphs • Understand How Katz Centrality Is an Extension of Eigenvector Centrality to Learning Directed Graphs
Prof. Ralucca Gera, [email protected] Applied Mathematics Department, ExcellenceNaval Postgraduate Through Knowledge School MA4404 Complex Networks Katz Centrality for directed graphs • Understand how Katz centrality is an extension of Eigenvector Centrality to Learning directed graphs. Outcomes • Compute Katz centrality per node. • Interpret the meaning of the values of Katz centrality. Recall: Centralities Quality: what makes a node Mathematical Description Appropriate Usage Identification important (central) Lots of one-hop connections The number of vertices that Local influence Degree from influences directly matters deg Small diameter Lots of one-hop connections The proportion of the vertices Local influence Degree centrality from relative to the size of that influences directly matters deg C the graph Small diameter |V(G)| Lots of one-hop connections A weighted degree centrality For example when the Eigenvector centrality to high centrality vertices based on the weight of the people you are (recursive formula): neighbors (instead of a weight connected to matter. ∝ of 1 as in degree centrality) Recall: Strongly connected Definition: A directed graph D = (V, E) is strongly connected if and only if, for each pair of nodes u, v ∈ V, there is a path from u to v. • The Web graph is not strongly connected since • there are pairs of nodes u and v, there is no path from u to v and from v to u. • This presents a challenge for nodes that have an in‐degree of zero Add a link from each page to v every page and give each link a small transition probability controlled by a parameter β. u Source: http://en.wikipedia.org/wiki/Directed_acyclic_graph 4 Katz Centrality • Recall that the eigenvector centrality is a weighted degree obtained from the leading eigenvector of A: A x =λx , so its entries are 1 λ Thoughts on how to adapt the above formula for directed graphs? • Katz centrality: ∑ + β, Where β is a constant initial weight given to each vertex so that vertices with zero in degree (or out degree) are included in calculations. -
Multidimensional Network Analysis
Universita` degli Studi di Pisa Dipartimento di Informatica Dottorato di Ricerca in Informatica Ph.D. Thesis Multidimensional Network Analysis Michele Coscia Supervisor Supervisor Fosca Giannotti Dino Pedreschi May 9, 2012 Abstract This thesis is focused on the study of multidimensional networks. A multidimensional network is a network in which among the nodes there may be multiple different qualitative and quantitative relations. Traditionally, complex network analysis has focused on networks with only one kind of relation. Even with this constraint, monodimensional networks posed many analytic challenges, being representations of ubiquitous complex systems in nature. However, it is a matter of common experience that the constraint of considering only one single relation at a time limits the set of real world phenomena that can be represented with complex networks. When multiple different relations act at the same time, traditional complex network analysis cannot provide suitable an- alytic tools. To provide the suitable tools for this scenario is exactly the aim of this thesis: the creation and study of a Multidimensional Network Analysis, to extend the toolbox of complex network analysis and grasp the complexity of real world phenomena. The urgency and need for a multidimensional network analysis is here presented, along with an empirical proof of the ubiquity of this multifaceted reality in different complex networks, and some related works that in the last two years were proposed in this novel setting, yet to be systematically defined. Then, we tackle the foundations of the multidimensional setting at different levels, both by looking at the basic exten- sions of the known model and by developing novel algorithms and frameworks for well-understood and useful problems, such as community discovery (our main case study), temporal analysis, link prediction and more. -
Eigenvector Centrality and Uniform Dominant Eigenvalue of Graph Components
Eigenvector Centrality and Uniform Dominant Eigenvalue of Graph Components Collins Anguzua,1, Christopher Engströmb,2, John Mango Mageroa,3,∗, Henry Kasumbaa,4, Sergei Silvestrovb,5, Benard Abolac,6 aDepartment of Mathematics, School of Physical Sciences, Makerere University, Box 7062, Kampala, Uganda bDivision of Applied Mathematics, The School of Education, Culture and Communication (UKK), Mälardalen University, Box 883, 721 23, Västerås,Sweden cDepartment of Mathematics, Gulu University, Box 166, Gulu, Uganda Abstract Eigenvector centrality is one of the outstanding measures of central tendency in graph theory. In this paper we consider the problem of calculating eigenvector centrality of graph partitioned into components and how this partitioning can be used. Two cases are considered; first where the a single component in the graph has the dominant eigenvalue, secondly when there are at least two components that share the dominant eigenvalue for the graph. In the first case we implement and compare the method to the usual approach (power method) for calculating eigenvector centrality while in the second case with shared dominant eigenvalues we show some theoretical and numerical results. Keywords: Eigenvector centrality, power iteration, graph, strongly connected component. ?This document is a result of the PhD program funded by Makerere-Sida Bilateral Program under Project 316 "Capacity Building in Mathematics and Its Applications". arXiv:2107.09137v1 [math.NA] 19 Jul 2021 ∗John Mango Magero Email addresses: [email protected] (Collins Anguzu), [email protected] (Christopher Engström), [email protected] (John Mango Magero), [email protected] (Henry Kasumba), [email protected] (Sergei Silvestrov), [email protected] (Benard Abola) 1PhD student in Mathematics, Makerere University. -
A Graph Neural Network Deep Learning Model Of
bioRxiv preprint doi: https://doi.org/10.1101/2021.03.15.435531; this version posted March 15, 2021. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. Structure Can Predict Function in the Human Brain: A Graph Neural Network Deep Learning Model of Functional Connectivity and Centrality based on Structural Connectivity Josh Neudorf, Shaylyn Kress, and Ron Borowsky* Cognitive Neuroscience Lab, Department of Psychology, University of Saskatchewan, Saskatoon, Saskatchewan, Canada * Corresponding author E-mail: [email protected] (RB) bioRxiv preprint doi: https://doi.org/10.1101/2021.03.15.435531; this version posted March 15, 2021. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. STRUCTURE CAN PREDICT FUNCTION IN THE HUMAN BRAIN 1 Abstract Although functional connectivity and associated graph theory measures (e.g., centrality; how centrally important to the network a region is) are widely used in brain research, the full extent to which these functional measures are related to the underlying structural connectivity is not yet fully understood. The most successful recent methods have managed to account for 36% of the variance in functional connectivity based on structural connectivity. Graph neural network deep learning methods have not yet been applied for this purpose, and offer an ideal model architecture for working with connectivity data given their ability to capture and maintain inherent network structure. -
Hybrid Centrality Measures for Binary and Weighted Networks
Hybrid Centrality Measures for Binary and Weighted Networks (Accepted at the 3rd workshop on Complex Networks) Alireza Abbasi, Liaquat Hossain Centre for Complex Systems Research, Faculty of Engineering and IT, University of Sydney, NSW 2006, Australia; [email protected]. Abstract Existing centrality measures for social network analysis suggest the im- portance of an actor and give consideration to actor’s given structural position in a network. These existing measures suggest specific attribute of an actor (i.e., popularity, accessibility, and brokerage behavior). In this study, we propose new hybrid centrality measures (i.e., Degree-Degree, Degree-Closeness and Degree- Betweenness), by combining existing measures (i.e., degree, closeness and bet- weenness) with a proposition to better understand the importance of actors in a given network. Generalized set of measures are also proposed for weighted net- works. Our analysis of co-authorship networks dataset suggests significant corre- lation of our proposed new centrality measures (especially weighted networks) than traditional centrality measures with performance of the scholars. Thus, they are useful measures which can be used instead of traditional measures to show prominence of the actors in a network. 1 Introduction Social network analysis (SNA) is the mapping and measuring of relationships and flows between nodes of the social network. SNA provides both a visual and a ma- thematical analysis of human-influenced relationships. The social environment can be expressed as patterns or regularities in relationships among interacting units [1]. Each social network can be represented as a graph made of nodes or ac- tors (e.g. individuals, organizations, information) that are tied by one or more spe- cific types of relations (e.g., financial exchange, trade, friends, and Web links). -
NODEXL for Beginners Nasri Messarra, 2013‐2014
NODEXL for Beginners Nasri Messarra, 2013‐2014 http://nasri.messarra.com Why do we study social networks? Definition from: http://en.wikipedia.org/wiki/Social_network: A social network is a social structure made up of a set of social actors (such as individuals or organizations) and a set of the dyadic ties between these actors. Social networks and the analysis of them is an inherently interdisciplinary academic field which emerged from social psychology, sociology, statistics, and graph theory. From http://en.wikipedia.org/wiki/Sociometry: "Sociometric explorations reveal the hidden structures that give a group its form: the alliances, the subgroups, the hidden beliefs, the forbidden agendas, the ideological agreements, the ‘stars’ of the show". In social networks (like Facebook and Twitter), sociometry can help us understand the diffusion of information and how word‐of‐mouth works (virality). Installing NODEXL (Microsoft Excel required) NodeXL Template 2014 ‐ Visit http://nodexl.codeplex.com ‐ Download the latest version of NodeXL ‐ Double‐click, follow the instructions The SocialNetImporter extends the capabilities of NodeXL mainly with extracting data from the Facebook network. To install: ‐ Download the latest version of the social importer plugins from http://socialnetimporter.codeplex.com ‐ Open the Zip file and save the files into a directory you choose, e.g. c:\social ‐ Open the NodeXL template (you can click on the Windows Start button and type its name to search for it) ‐ Open the NodeXL tab, Import, Import Options (see screenshot below) 1 | Page ‐ In the import dialog, type or browse for the directory where you saved your social importer files (screenshot below): ‐ Close and open NodeXL again For older Versions: ‐ Visit http://nodexl.codeplex.com ‐ Download the latest version of NodeXL ‐ Unzip the files to a temporary folder ‐ Close Excel if it’s open ‐ Run setup.exe ‐ Visit http://socialnetimporter.codeplex.com ‐ Download the latest version of the socialnetimporter plug in 2 | Page ‐ Extract the files and copy them to the NodeXL plugin direction. -
Comm 645 Handout – Nodexl Basics
COMM 645 HANDOUT – NODEXL BASICS NodeXL: Network Overview, Discovery and Exploration for Excel. Download from nodexl.codeplex.com Plugin for social media/Facebook import: socialnetimporter.codeplex.com Plugin for Microsoft Exchange import: exchangespigot.codeplex.com Plugin for Voson hyperlink network import: voson.anu.edu.au/node/13#VOSON-NodeXL Note that NodeXL requires MS Office 2007 or 2010. If your system does not support those (or you do not have them installed), try using one of the computers in the PhD office. Major sections within NodeXL: • Edges Tab: Edge list (Vertex 1 = source, Vertex 2 = destination) and attributes (Fig.1→1a) • Vertices Tab: Nodes and attribute (nodes can be imported from the edge list) (Fig.1→1b) • Groups Tab: Groups of nodes defined by attribute, clusters, or components (Fig.1→1c) • Groups Vertices Tab: Nodes belonging to each group (Fig.1→1d) • Overall Metrics Tab: Network and node measures & graphs (Fig.1→1e) Figure 1: The NodeXL Interface 3 6 8 2 7 9 13 14 5 12 4 10 11 1 1a 1b 1c 1d 1e Download more network handouts at www.kateto.net / www.ognyanova.net 1 After you install the NodeXL template, a new NodeXL tab will appear in your Excel interface. The following features will be available in it: Fig.1 → 1: Switch between different data tabs. The most important two tabs are "Edges" and "Vertices". Fig.1 → 2: Import data into NodeXL. The formats you can use include GraphML, UCINET DL files, and Pajek .net files, among others. You can also import data from social media: Flickr, YouTube, Twitter, Facebook (requires a plugin), or a hyperlink networks (requires a plugin).