Muto et al./Breeding Science doi:10.1270/jsbbs.18086 Supplemental Table 1. Passport data of 314 rice accessions used in this report
Entry No. Variety name Ecosystem for Date of Geographical information Day to heading Cultivar group Cluster group
cultivation sampling based on days based on Province GPS data 2014 2015 U:Upland to heading polymorphism N E Altitude Sowing: Sowing: or data of SSR (m) 9/14 5/18 or L: Lowland makers 5/26
- Nipponbare L ------Ia
- Kasalath L ------II
1 Khao makeua U 20051106 Luang Namtha 20°22′06.7″ 101°13′30.8″ 435 112 - - Ib
2 Ngo pi iyar U 20051107 Luang Namtha 20°35′37.1″ 101°27′14,3″ 447 112 92 L2 Ib
3 Unknown - 20051107 Luang Namtha 20°35′37.1″ 101°27′14,3″ 447 112 - - Ib
4 Ngo nie U 20061202 Xiangkhouang 19°37′23.6″ 103°43′05.1″ 528 78 72 E1 Ib
5 Ngo nie U 20061202 Xiangkhouang 19°37′23.6″ 103°43′05.1″ 528 83 - - Ib
6 Ngo U 20061202 Xiangkhouang 19°37′23.6″ 103°43′05.1″ 528 91 111 L2 Ib
7 Ngo bom U 20061202 Xiangkhouang 19°37′23.6″ 103°43′05.1″ 528 70 76 E1 Ib
8 Ngo hiyan U 20061202 Xiangkhouang 19°37′23.6″ 103°43′05.1″ 528 69 115 E2 Ib
9 Ngo chao U 20061202 Xiangkhouang 19°37′23.6″ 103°43′05.1″ 528 55 129 E2 Ib
10 Ngo nie L 20061202 Xiangkhouang 19°37′23.6″ 103°43′05.1″ 528 78 135 E3 Ia
11 Khao deng kan U 20061202 Xiangkhouang 19°37′45.2' 103°42′57.7' 516 78 102 E2 Ib
12 Khao yoi U 20061221 Xiangkhouang 19°37′45.2' 103°42′57.7' 516 83 - - Ib
13 Khao luatgoa U 20061221 Xiangkhouang 19°37′45.2' 103°42′57.7' 516 - - - Ib
14 Khao jua U 20061221 Xiangkhouang 19°37′45.2' 103°42′57.7' 516 83 - - Ib
15 lhao wen U 20061221 Xiangkhouang 19°37′45.2' 103°42′57.7' 516 70 119 E2 Ib
16 lKhao san Khao U 20061221 Xiangkhouang 19°37′45.2' 103°42′57.7' 516 103 75 L1 Ib
17 Khao deng nam hat U 20061221 Xiangkhouang 19°37′45.2' 103°42′57.7' 516 67 135 E3 Ib
18 Khao iyai en L 20061221 Xiangkhouang 19°37′45.2' 103°42′57.7' 516 70 135 E3 II 19 Khao kai noi L 20061221 Xiangkhouang 19°37′45.2' 103°42′57.7' 516 80 135 E3 Ia
20 Khao pon L 20061221 Xiangkhouang 19°37′45.2' 103°42′57.7' 516 69 135 E3 II
21 Khao deng U 20061226 Houaphan 20°19'27.0″ 104°32'17.1″ 471 - - - Ib
22 Khao yoi U 20061226 Houaphan 20°19'27.0″ 104°32'17.1″ 471 88 71 E1 Ib
23 Khao wan kon U 20061226 Houaphan 20°19'27.0″ 104°32'17.1″ 471 - - - Ib
24 Khao pe leng U 20061226 Houaphan 20°19'27.0″ 104°32'17.1″ 471 58 106 E2 II
25 Khao kai noi L 20061226 Houaphan 20°19'27.0″ 104°32'17.1″ 471 88 144 E3 Ia
26 Khao samptone L 20061226 Houaphan 20°19'27.0″ 104°32'17.1″ 471 88 119 E2 II
27 Khao kai noi L 20061226 Houaphan 20°19'27.0″ 104°32'17.1″ 471 74 119 E2 Ia
28 Unknown - 20061226 Houaphan 20°19'27.0″ 104°32'17.1″ 471 85 71 E1 Ib
29 Khao san noi U 20061226 Houaphan 19°56′14.2″ 104°37′21.5″ 664 88 77 E1 Ib
30 Khao nang mao U 20061226 Houaphan 19°56′14.2″ 104°37′21.5″ 664 70 70 E1 Ib
31 Khao set U 20061226 Houaphan 19°56′14.2″ 104°37′21.5″ 664 74 137 E3 Ib
32 Khao kan U 20061226 Houaphan 19°56′14.2″ 104°37′21.5″ 664 95 77 L1 Ib
33 Khao nyot nang U 20061226 Houaphan 19°56′14.2″ 104°37′21.5″ 664 79 109 E2 Ib
34 Khao chao U 20061226 Houaphan 19°56′14.2″ 104°37′21.5″ 664 69 129 E2 Ib
35 Khao kam U 20061226 Houaphan 19°56′14.2″ 104°37′21.5″ 664 63 119 E2 Ib
36 Khao mak ko U 20061226 Houaphan 19°56′14.2″ 104°37′21.5″ 664 67 128 E2 Ib
37 Khao nong U 20061226 Houaphan 19°56′14.2″ 104°37′21.5″ 664 83 136 E3 Ib
38 Khao kai noi L 20061226 Houaphan 19°56′14.2″ 104°37′21.5″ 664 74 135 E3 Ia
39 Khao bon L 20061226 Houaphan 19°56′14.2″ 104°37′21.5″ 664 71 - - II
40 Khao bao laam U 20061229 Houaphan 20°46′50.2″ 103°58′00.8″ 300 55 101 E2 II
41 Khao mak ko U 20061229 Houaphan 20°46′50.2″ 103°58′00.8″ 300 91 70 L1 Ib
42 Khao nam nun L 20061229 Houaphan 20°46′50.2″ 103°58′00.8″ 300 79 - - II
43 Khao ko koo L 20061229 Houaphan 20°46′50.2″ 103°58′00.8″ 300 88 119 E2 II
44 Khao deng U 20061229 Houaphan 20°46′52.3″ 103°57′43.7″ 300 98 80 L1 Ib 45 Khao mai lai U 20061229 Houaphan 20°46′52.3″ 103°57′43.7″ 300 - - - Ib
46 Khao ko koo L 20061229 Houaphan 20°46′52.3″ 103°57′43.7″ 300 83 - - II
47 Khao tae do U 20061229 Houaphan 20°46′19.2″ 104°02′52.5″ 396 - 79 - Ib
48 Khao yuak U 20061203 Houaphan 20°46′19.2″ 104°02′52.5″ 396 91 - - II
49 Khao kaam peng U 20061023 Houaphan 20°42′26.9″ 104°18′45.8″ 267 64 - - Ib
50 Khao khuak U 20070101 Houaphan 20°42′26.9″ 104°18′45.8″ 267 78 77 E1 Ib
51 Khao pee leng U 20070101 Houaphan 20°42′26.9″ 104°18′45.8″ 267 68 105 E2 II
52 Khao haan U 20070101 Houaphan 20°42′26.9″ 104°18′45.8″ 267 88 - - Ib
53 Khao do Khao U 20070101 Houaphan 20°42′26.9″ 104°18′45.8″ 267 113 - - Ib
54 Khao yuak U 20070101 Houaphan 20°42′26.9″ 104°18′45.8″ 267 71 79 E1 Ib
55 Khao kheo kwai U 20070101 Houaphan 20°42′26.9″ 104°18′45.8″ 267 - - - Ib
56 Khao kaam peng U 20070101 Houaphan 20°42′26.9″ 104°18′45.8″ 267 64 140 E3 Ib
57 Khao pe L 20070101 Houaphan 20°42′26.9″ 104°18′45.8″ 267 82 - - II
58 Khao fuang L 20070101 Houaphan 20°42′26.9″ 104°18′45.8″ 267 - - - Ia
59 Khao taa dok kham L 20070101 Houaphan 20°42′26.9″ 104°18′45.8″ 267 89 143 E3 II
60 Khao leuang U 20070101 Houaphan 20°43′28.8″ 104°25′04.4″ 260 99 130 L2 Ib
61 Khao mak kheua U 20070102 Houaphan 20°43′28.8″ 104°25′04.4″ 260 - 84 - Ib
62 Khao chien L 20070102 Houaphan 20°43′28.8″ 104°25′04.4″ 260 82 102 E2 II
63 Khao khaam peng L 20070102 Houaphan 20°43′28.8″ 104°25′04.4″ 260 56 136 E3 Ib
64 Khao kai noi lai L 20070102 Houaphan 20°43′28.8″ 104°25′04.4″ 260 79 136 E3 Ia
65 Khao kai noi leuang L 20070102 Houaphan 20°43′28.8″ 104°25′04.4″ 260 82 127 E2 Ia
66 Khao han ngua kom U 20080218 Huaphanh 19°58′15.0″ 104°40′36.0″ 334 64 137 E3 Ib
67 Khao pome U 20080218 Huaphanh 19°58′15.0″ 104°40′36.0″ 334 77 128 E2 Ib
68 Khao nyang U 20080218 Huaphanh 19°58′15.0″ 104°40′36.0″ 334 77 122 E2 Ib
69 Khao wane diyan L 20080218 Huaphanh 19°58′15.0″ 104°40′36.0″ 334 - - - Ia
70 Khao leuang L 20080218 Huaphanh 19°58′15.0″ 104°40′36.0″ 334 113 - - Ia 71 Khao pong L 20080218 Huaphanh 19°58′15.0″ 104°40′36.0″ 334 65 - - II
72 Khao nia U 20080218 Huaphanh 19°46′41.9″ 104°32′03.5″ 642 54 107 E2 Ib
73 Khao cham U 20080219 Huaphanh 19°46′41.9″ 104°32′03.5″ 642 67 148 E3 Ib
74 Khao chao leuang U 20080221 Huaphanh 19°50′40.7″ 104°32′35.5″ 610 60 - - Ib
75 Khao do deng U 20080221 Huaphanh 19°50′40.7″ 104°32′35.5″ 610 78 143 E3 Ib
76 Khao nam man U 20080222 Huaphanh 20°05′39.4″ 104°43′50.3″ 595 74 143 E3 Ib
77 Khao mak heng U 20080222 Huaphanh 20°05′39.4″ 104°43′50.3″ 595 61 - - Ib
78 Khao mak ho U 20080222 Huaphanh 20°05′39.4″ 104°43′50.3″ 595 - - - Ib
79 Khao Khao U 20080223 Huaphanh 20°12′24.0″ 104°32′08.3″ 1003 70 143 E3 Ib
80 Khao kam peng U 20080223 Huaphanh 20°12′24.0″ 104°32′08.3″ 1003 65 115 E2 Ib
81 Bley cha U 20080223 Luang Prabang 20°24′25.1″ 102°59′25.7″ 968 76 143 E3 Ib
82 Bley dar U 20080223 Luang Prabang 20°24′25.1″ 102°59′25.7″ 968 74 148 E3 Ib
83 Bley song dar U 20080223 Luang Prabang 20°24′25.1″ 102°59′25.7″ 968 75 144 E3 Ib
87 Khao nam yen L 20080225 Huaphanh 20°24′58.4″ 103°22′00.9″ 791 58 123 E2 Ib
88 Khao kai noi L 20080225 Huaphanh 20°24′58.4″ 103°22′00.9″ 791 76 - - Ia
89 Hngo mok U 20080225 Huaphanh 20°06′13.8″ 103°23′18.5″ 653 113 - - Ib
90 Hngo iyar nye L 20080225 Huaphanh 20°06′13.8″ 103°23′18.5″ 653 85 - - Ia
91 Hngo chao U 20080225 Huaphanh 20°06′13.8″ 103°23′18.5″ 653 82 140 E3 Ib
92 Hngo tong U 20080225 Huaphanh 20°06′13.8″ 103°23′18.5″ 653 54 102 E2 Ib
93 Hngo hian U 20080225 Huaphanh 20°06′13.8″ 103°23′18.5″ 653 54 98 E2 Ib
94 Khao kam hai U 20080228 Huaphanh 19°55′36.0″ 103°26′42.9″ 1257 55 122 E2 Ib
95 Khao kaloi dam U 20080228 Huaphanh 19°55′36.0″ 103°26′42.9″ 1257 65 136 E3 Ib
96 Khao chao deng L 20080228 Huaphanh 19°55′36.0″ 103°26′42.9″ 1257 67 137 E3 II
97 Ngo chao kham U 20080306 Luang Prabang 20°26′27.8″ 102°26′27.8″ 833 61 135 E3 Ib
98 Ngo nam ou U 20080306 Luang Prabang 20°26′27.8″ 102°26′27.8″ 833 58 123 E2 Ib
99 Ngo chagar U 20080306 Luang Prabang 20°26′27.8″ 102°26′27.8″ 833 60 143 E3 Ib 100 Ngo hiang U 20080306 Luang Prabang 20°26′27.8″ 102°26′27.8″ 833 65 142 E3 Ib
101 Ngo kha U 20080306 Luang Prabang 20°26′27.8″ 102°26′27.8″ 833 - - - Ib
102 Ngo hiang khur U 20080306 Luang Prabang 20°26′27.8″ 102°26′27.8″ 833 63 136 E3 Ib
103 Ngo chao U 20051106 Luang Namtha 20°22′13.6″ 101°12′51.2″ 443 74 135 E3 Ib
104 Ngo siu U 20051027 Oudomxay 20°13′19.6″ 101°55′41.7″ 492 57 113 E2 II
105 Ngo paan U 20051027 Oudomxay 20°13′19.6″ 101°55′41.7″ 492 75 136 E3 Ib
106 Ngo klock U 20051027 Oudomxay 20°10′53.2″ 101°56′00.9″ 465 57 135 E3 Ib
107 michugusu U 20051101 Oudomxay 21°06′11.7″ 101°53′43.0″ 842 78 140 E3 Ib
108 Ko neKo U 20060317 Oudomxay 21°06′11.7″ 101°53′43.0″ 842 - 115 - Ib
109 Ko neKo U 20060317 Oudomxay 21°06′11.7″ 101°53′43.0″ 842 60 136 E3 Ib
110 Unknown - 20060317 Oudomxay 21°06′11.7″ 101°53′43.0″ 842 82 136 E3 II
111 Yengun U 20060317 Oudomxay 21°07′58.2″ 101°54′10.6″ 1202 77 130 E2 Ib
112 utayo L 20060318 Oudomxay 21°07′58.2″ 101°54′10.6″ 1202 82 121 E2 II
113 Chegu U 20060318 Oudomxay 21°07′58.2″ 101°54′10.6″ 1202 83 99 E2 Ib
114 Ta kiad khao L 20060318 Oudomxay 21°03′02.0″ 101°48′43.0″ 786 69 122 E2 II
115 Neo pan chin L 20060318 Oudomxay 21°03′02.0″ 101°48′43.0″ 786 78 102 E2 II
116 Khao hok L 20060318 Oudomxay 21°03′02.0″ 101°48′43.0″ 786 64 140 E3 II
117 Ta kiad dam L 20060318 Oudomxay 21°03′02.0″ 101°48′43.0″ 786 67 121 E2 II
118 Hon kan L 20060318 Oudomxay 21°03′02.0″ 101°48′43.0″ 786 60 - - II
119 Khao do muan sun L 20041112 Luang Prabang 20°17′36.2″ 102°15′08.8″ 372 71 151 E3 Ib
120 Khao makua U 20051018 Luang Prabang 20°17′36.2″ 102°15′08.8″ 372 95 Ib
121 Unknown L 20051018 Luang Prabang 20°17′36.2″ 102°15′08.8″ 372 74 121 E2 II
122 Khaodo fan L 20051018 Luang Prabang 20°17′36.2″ 102°15′08.8″ 372 99 129 L2 Ib
123 Khao siu U 20051018 Luang Prabang 20°17′36.2″ 102°15′08.8″ 372 85 121 E2 II
124 Khao hiya U 20051018 Luang Prabang 20°17′36.2″ 102°15′08.8″ 372 99 - - Ib
125 Khao pee U 20051018 Luang Prabang 20°17′36.2″ 102°15′08.8″ 372 57 129 E2 Ib 126 Khao son U 20051018 Luang Prabang 20°17′36.2″ 102°15′08.8″ 372 88 92 E2 II
127 Ngo bree U 20051023 Luang Prabang 20°49′35.9″ 102°41′15.3″ 368 68 109 E2 Ib
128 Ngo nin niyar U 20051023 Luang Prabang 20°49′35.9″ 102°41′15.3″ 368 74 129 E2 II
129 Khao ohn (ohn) U 20031012 Luang Prabang 20ﾟ23,487” 102ﾟ19,320” 344 77 135 E3 Ib
130 Khao ohn (ohn) U 20031012 Luang Prabang 20ﾟ23,487” 102ﾟ19,320” 344 76 129 E2 Ib
131 Khao beeng deng U 20031012 Luang Prabang 20ﾟ23,487” 102ﾟ19,320” 344 82 79 E1 Ib
132 Unknown U 20031012 Luang Prabang 20ﾟ23,487” 102ﾟ19,320” 344 67 120 E2 Ib
133 Khao bon U 20031012 Luang Prabang 20ﾟ23,487” 102ﾟ19,320” 344 88 114 E2 II
134 Khao pee pii U 20031012 Luang Prabang 20ﾟ21,229” 102ﾟ24,238” 472 54 135 E3 Ib
135 Khao khaw U 20031013 Luang Prabang 20ﾟ21,229” 102ﾟ24,238” 472 88 77 E1 II
136 Khao ham maak U 20031013 Luang Prabang 20ﾟ24,549″ 102ﾟ19’27.5” 350 - - - Ib
137 Khao khaw U 20031013 Luang Prabang 20ﾟ24,549″ 102ﾟ19’27.5” 350 54 91 E2 Ib
138 Khao wai U 20031013 Luang Prabang 20ﾟ24,549″ 102ﾟ19’27.5” 350 70 135 E3 Ib
139 Khao ohn U 20031013 Luang Prabang 20ﾟ24,549″ 102ﾟ19’27.5” 350 59 114 E2 Ib
140 Khao chao U 20031013 Luang Prabang 20ﾟ21’59.2” 102ﾟ21’29.8” 346 74 71 E1 Ib
141 Khao hin tam U 20031014 Luang Prabang 20ﾟ33’12.5” 102ﾟ23’34.7” 408 67 122 E2 Ib
142 Khao hin pom U 20031014 Luang Prabang 20ﾟ33’12.5” 102ﾟ23’34.7” 408 98 - - II
143 Khao siu U 20031014 Luang Prabang 20ﾟ33’12.5” 102ﾟ23’34.7” 408 63 107 E2 Ib
144 Khao chao Pun U 20031014 Luang Prabang 20ﾟ33’12.5” 102ﾟ23’34.7” 408 106 77 L1 II
145 Khao chao U 20031014 Luang Prabang 20ﾟ33’12.5” 102ﾟ23’34.7” 408 102 77 L1 Ib
146 Khao med noi U 20031014 Luang Prabang 20ﾟ34’45.2” 102ﾟ23’41.2” 410 63 135 E3 Ib
147 Khao hin U 20031014 Luang Prabang 20ﾟ34’45.2” 102ﾟ23’41.2” 410 99 - - Ib
148 Khao leuang U 20031014 Luang Prabang 20ﾟ34’45.2” 102ﾟ23’41.2” 410 63 119 E2 Ib
149 Khao deng U 20031014 Luang Prabang 20ﾟ34’33.9” 102ﾟ21’10.3” 521 97 77 L1 Ib
150 Khao sea (non-glutinous) U 20031014 Luang Prabang 20ﾟ34’33.9” 102ﾟ21’10.3” 521 61 97 E2 Ib
151 Khao khaw do U 20031015 Luang Prabang 19ﾟ50’58.5” 102ﾟ11’11.4” 397 102 77 L1 II 152 Unknown U 20031015 Luang Prabang 19ﾟ50’58.5” 102ﾟ11’11.4” 397 79 84 E1 Ib
153 Unknown U 20031015 Luang Prabang 19ﾟ50’58.5” 102ﾟ11’11.4” 397 78 87 E2 Ib
154 Unknown U 20031015 Luang Prabang 19ﾟ50’58.5” 102ﾟ11’11.4” 397 78 74 E1 Ib
155 Khao sala kham U 20031015 Luang Prabang 19ﾟ42’12.3” 102ﾟ08’22.0” 398 - - - II
156 Mak kheua Khao U 20031015 Luang Prabang 19ﾟ42’12.3” 102ﾟ08’22.0” 398 - - - Ib
157 Khao chao pun U 20031015 Luang Prabang 19ﾟ42’10.0” 102ﾟ08’24.8” 442 - - - Ib
158 Khao leuan U 20031015 Luang Prabang 19ﾟ42’10.0” 102ﾟ08’24.8” 434 49 - - II
159 Unknown U 20031015 Luang Prabang 19ﾟ44’55.0” 102ﾟ11’07.1” 434 68 135 E3 Ib
160 Unknown U 20031015 Luang Prabang 19ﾟ44’55.0” 102ﾟ11’07.1” 434 57 135 E3 II
161 Khao kii khwai U 20031015 Luang Prabang 19ﾟ44’31.4” 102ﾟ11’27.3” 442 54 - - II
162 Mak kheua Khao U 20031015 Luang Prabang 19ﾟ44’31.4” 102ﾟ11’27.3” 442 91 86 L2 Ib
163 Unknown - 20031015 Luang Prabang 19ﾟ44’31.4” 102ﾟ11’27.3” 442 - - - Ib
164 Unknown - 20031015 Luang Prabang 19ﾟ44’31.4” 102ﾟ11’27.3” 442 90 - - Ib
165 Unknown U 20031015 Luang Prabang 19ﾟ42’24.1” 102ﾟ11’21.5” 944 95 - - Ib
166 Unknown U 20031015 Luang Prabang 19ﾟ42’24.1” 102ﾟ11’21.5” 944 59 137 E3 Ib
167 Unknown U 20031015 Luang Prabang 19ﾟ42’24.1” 102ﾟ11’21.5” 944 78 127 E2 Ib
168 Unknown U 20031015 Luang Prabang 19ﾟ42’24.1” 102ﾟ11’21.5” 944 - - - Ib
169 Unknown U 20031015 Luang Prabang 19ﾟ42’24.1” 102ﾟ11’21.5” 944 - - - Ib
170 Unknown - 20031015 Luang Prabang 19ﾟ42’24.1” 102ﾟ11’21.5” 944 64 - - Ib
171 Unknown - 20031015 Luang Prabang 19ﾟ42’24.1” 102ﾟ11’21.5” 944 - - - Ib
172 Unknown - 20031015 Luang Prabang 19ﾟ42’24.1” 102ﾟ11’21.5” 944 - - - Ib
173 Unknown U 20031015 Luang Prabang 19ﾟ42’24.1” 102ﾟ11’21.5” 944 70 130 E2 Ib
174 Unknown U 20031015 Luang Prabang 19ﾟ44’37.8” 102ﾟ11’38.1” 590 - - - Ib
175 Unknown U 20031015 Luang Prabang 19ﾟ44’37.8” 102ﾟ11’38.1” 590 57 114 E2 Ib
176 Unknown U 20031015 Luang Prabang 19ﾟ44’37.8” 102ﾟ11’38.1” 590 55 114 E2 II
177 Mali 105 L 20050108 Vientiane 16°20′30.5″ 102°5′50.4″ 222 63 158 E3 II 178 Khao chao mali L 20041103 Vientiane 17°13′18.8″ 102°54′50.7″ 180 70 151 E3 II
179 Khao pee deng U 20041110 Vientiane - - - 58 141 E3 II
180 Khao saam pathone do L 20041110 Vientiane 18°01′48.4″ 102°49′09.2″ 165 63 154 E3 II
181 TDK2 - 20041111 Vientiane - - - 102 119 L2 II
182 TDK6 - 20041112 Vientiane - - - 92 120 L2 II
183 Khao pee deng U 20041112 Vientiane 18°08′06.0″ 102°49′01.6″ 170 62 136 E3 II
184 Khao chao hoom mali - 20041113 Vientiane - - - 71 154 E3 II
185 Khao tomburi - 20041113 Vientiane - - - 77 151 E3 II
186 Khao hoom huang L 20041113 Vientiane 18°13′35.8″ 102°46′19.8″ 188 82 129 E2 II
187 Khao sai mai L 20041114 Vientiane 18°13′35.8″ 102°46′19.8″ 188 71 151 E3 II
188 Khao phan leua lao L 20041114 Vientiane 18°13′35.8″ 102°46′19.8″ 188 74 - - II
189 Khao khai noi L 20041114 Vientiane 18°14′30.0″ 102°49′55.5″ 183 82 136 E3 II
190 Khao phan mai L 20041114 Vientiane 18°14′30.0″ 102°49′55.5″ 183 68 152 E3 Ia
191 Khao phee dian U 20041114 Vientiane 18°14′30.0″ 102°49′55.5″ 183 62 101 E2 II
192 Khao hoom L 20041114 Vientiane 18°05′08.0″ 102°37′43.7″ 185 85 135 E3 II
193 Khao iik Khao do L 20041115 Vientiane 18°05′08.0″ 102°37′43.7″ 185 97 136 L3 II
194 Khao dok tiu L 20041115 Vientiane 18°05′08.0″ 102°37′43.7″ 185 64 136 E3 II
195 Khao chao niipun L 20041115 Vientiane 18°11′50.0″ 102°39′00.8″ 168 88 - - II
196 TDK deng L 20041115 Vientiane 18°11′50.0″ 102°39′00.8″ 168 85 - - Ia
197 Khao none naa L 20041115 Vientiane 18°11′50.0″ 102°39′00.8″ 168 67 136 E3 II
198 TDK1 L 20041105 Vientiane 18°14′22.1″ 102°47′07.8″ 168 84 - - II
199 Khao angii - 20041105 Vientiane 18°14′22.1″ 102°47′07.8″ 168 75 154 E3 II
200 Khao hoom huan L 20041105 Vientiane 18°14′22.1″ 102°47′07.8″ 168 83 121 E2 II
201 Khao chao hoom mali L 20041106 Vientiane 18°00′44.6″ 102°48′17.6″ 165 77 151 E3 II
202 Khao kii tom L 20041106 Vientiane 18°00′48.1″ 102°48′30.1″ 165 67 151 E3 II
203 Khao mak kham L 20041106 Vientiane 18°00′48.1″ 102°48′30.1″ 165 62 137 E3 II 204 Khao denng L 20041106 Vientiane 18°00′48.1″ 102°48′30.1″ 165 - - - II
205 Khao hoom mali L 20041106 Vientiane 18°00′48.1″ 102°48′30.1″ 165 63 129 E2 II
206 Khao ubong deeng L 20041106 Vientiane 17°51′21.8″ 102°40′21.2″ 168 90 - - II
207 Khao hoom mali L 20041106 Vientiane - - - 75 151 E3 II
208 Taa dok kham 6 L 20041107 Vientiane 18°09′16.6″ 102°44′12.0″ 165 97 - - II
209 TDK1 L 20041107 Vientiane 18°09′16.6″ 102°44′12.0″ 165 78 112 E2 II
210 Unknown L 20041107 Vientiane 18°09′16.6″ 102°44′12.0″ 165 74 - - II
211 Ngo krok & ngo ho U 20091222 Luang Namtha 20°45'58.7 101°12'32.3" 701 65 129 E2 Ib
212 Ngo met ka tron L 20091223 Luang Namtha 20°45'58.7 101°12'32.3" 701 74 143 E3 Ib
213 Ngo siu meuang fa L 20091223 Luang Namtha 20°45'58.7 101°12'32.3" 701 77 - - II
214 Ngo yang U 20091223 Luang Namtha 20°45'58.7 101°12'32.3" 701 65 129 E2 Ib
215 Ngo lamhan U 20091223 Bokeo 20°02'16.5 100°47'03.1" 428 97 77 L1 Ib
216 Ngo kuy U 20091222 Luang Namtha 20°44'05.8" 101°10'24.2'' 780 78 - - Ib
217 Ngo mat kantor L 20091223 Bokeo 20°02'16.5 100°47'03.1" 428 75 - - II
218 Ngo ante U 20091223 Bokeo 20°02'16.5 100°47'03.1" 428 83 - - Ib
219 Ngo yim U 20091223 Bokeo 20°02'16.5 100°47'03.1" 428 - 140 - II
220 Ngo meo U 20091223 Bokeo 20°02'16.5 100°47'03.1" 428 70 123 E2 II
221 Ngo yim U 20091222 Luang Namtha 20°44'05.8" 101°10'24.2'' 780 74 148 E3 Ib
222 Ngo langlon U 20091223 Bokeo 20°02'16.5 100°47'03.1" 428 95 120 L2 Ib
223 Ngo ho U 20091222 Luang Namtha 20°44'05.8" 101°10'24.2'' 780 62 135 E3 Ib
224 Ngo yang U 20091222 Luang Namtha 20°44'05.8" 101°10'24.2'' 780 70 148 E3 Ib
225 Ngo krok U 20091226 Bokeo 20°05'28.2" 100°54'10.2" 844 57 119 E2 Ib
226 Ngo egg U 20091227 Bokeo 20°05'28.2" 100°54'10.2" 844 74 149 E3 Ib
227 Ngo siu U 20091227 Bokeo 20°05'28.2" 100°54'10.2" 844 58 123 E2 II
228 Ngo krok L 20091227 Luang Namtha 20°34'28.5" 101°31'31.9" 573 67 135 E3 II
229 Ngo roy U 20091231 Luang Namtha 20°34'28.5" 101°31'31.9" 573 83 148 E3 Ib 230 Ngo chak U 20091230 Luang Namtha 20°34'28.5" 101°31'31.9" 573 61 129 E2 Ib
231 Ngo hiyang U 20091230 Luang Namtha 20°34'28.5" 101°31'31.9" 573 74 135 E3 Ib
232 Ngo ka tor L 20091230 Luang Namtha 20°34'28.5" 101°31'31.9" 573 70 140 E3 Ib
233 Ngo rong krong U 20091230 Luang Namtha 20°34'28.5" 101°31'31.9" 573 78 129 E2 Ib
234 Ngo rachang U 20091230 Luang Namtha 20°34'28.5" 101°31'31.9" 573 69 148 E3 Ib
235 Ngo year jim U 20091230 Luang Namtha 20°34'28.5" 101°31'31.9" 573 78 121 E2 Ib
236 Ngo heunta heum prang U 20091230 Luang Namtha 20°34'28.5" 101°31'31.9" 573 65 148 E3 Ib
237 Ngo rang du U 20091230 Luang Namtha 20°34'28.5" 101°31'31.9" 573 81 107 E2 Ib
238 Ngo hante L 20091230 Luang Namtha 20°34'28.5" 101°31'31.9" 573 84 121 E2 II
239 Ngo charing U 20091230 Luang Namtha 20°34'28.5" 101°31'31.9" 573 89 91 E2 Ib
240 Ngo chagar & Ngo kong U 20091230 Luang Namtha 20°34'28.5" 101°31'31.9" 573 69 144 E3 Ib
sim
241 Ngo ple - 20091230 Luang Namtha 20°34'28.5" 101°31'31.9" 573 74 101 E2 II
242 Ngo yim nam U 20091230 Luang Namtha 20°34'28.5" 101°31'31.9" 573 58 121 E2 Ib
243 Ngo kang U 20091230 Luang Namtha 20°19'44.2" 101°10'39.6" 877 77 135 E3 Ib
244 Ngo chong U 20100102 Luang Namtha 20°19'44.2" 101°10'39.6" 877 71 140 E3 Ib
245 Ngo kanna U 20100102 Luang Namtha 20°19'44.2" 101°10'39.6" 877 63 121 E2 Ib
246 Ngo chari U 20091222 Luang Namtha 20°44'05.8" 101°10'24.2'' 423 74 148 E3 Ib
247 Ngo neuang pha U 20100102 Luang Namtha 20°19'44.2" 101°10'39.6" 877 75 - - Ib
248 Ngo lang U 20100102 Luang Namtha 20°19'44.2" 101°10'39.6" 877 65 107 E2 Ib
249 Ngo leung U 20100102 Luang Namtha 20°19'44.2" 101°10'39.6" 877 89 99 E2 Ib
250 Ngo salan U 20100102 Luang Namtha 20°19'44.2" 101°10'39.6" 877 81 132 E2 Ib
251 Ngo poon U 20100102 Luang Namtha 20°19'44.2" 101°10'39.6" 877 68 142 E3 Ib
252 Ngo po U 20100102 Luang Namtha 20°19'44.2" 101°10'39.6" 877 70 - - Ib
253 Ngo chari U 20100102 Luang Namtha 20°19'44.2" 101°10'39.6" 877 74 148 E3 Ib
254 Ngo yam kone U 20100102 Luang Namtha 20°19'44.2" 101°10'39.6" 877 64 Ib 255 Thao peng L 20080306 Phongsaly 21°10'43.2 102°42'27.2" 350 85 135 E3 II
256 Leang (Ngo andrii) U 20081221 Phongsaly 21°10'43.2 102°42'27.2" 350 65 135 E3 II
257 Deng lon U 20090105 Bokeo 20°07'15.0" 100°37'27.6" 368 99 - - Ib
258 Ngo kam U 20090107 Bokeo 20°07'15.0" 100°37'27.6" 368 69 - - Ib
259 Ngo turune U 20090107 Bokeo 20°07'15.0" 100°37'27.6" 368 105 77 L1 Ib
260 Ngo ex/hiang U 20090107 Bokeo 20°07'15.0" 100°37'27.6" 368 - - - Ib
261 Ngo kheurn U 20090107 Bokeo 20°07'15.0" 100°37'27.6" 368 98 - - Ib
262 Linock U 20090107 Bokeo 20°07'15.0" 100°37'27.6" 368 97 - - II
263 Ngo pneur yiｍ U 20090107 Bokeo 20°07'15.0" 100°37'27.6" 368 - - - Ib
264 Ta khiat L 20090107 Bokeo 20°07'15.0" 100°37'27.6" 368 75 112 E2 II
265 Hor che L 20090107 Bokeo 20°44'39.3" 100°28'22..4" 620 68 112 E2 II
266 Sammanar U 20090109 Bokeo 20°44'39.3" 100°28'22..4" 620 74 121 E2 Ib
267 Hor che(chao) U 20090109 Bokeo 20°44'39.3" 100°28'22..4" 620 82 - - Ib
268 Peak U 20090109 Bokeo 20°44'39.3" 100°28'22..4" 620 77 136 E3 Ib
269 Hor yor na L 20090109 Bokeo 20°44'39.3" 100°28'22..4" 620 68 112 E2 II
270 Khao chin L 20090109 Bokeo 20°38'31.4" 100°27'36.6" 495 77 129 E2 II
271 Bio tang bang U 20090110 Bokeo 20°38'31.4" 100°27'36.6" 495 68 - - Ib
272 Bio kuling L 20090110 Bokeo 20°38'31.4" 100°27'36.6" 495 77 114 E2 II
273 Bio ku day U 20090110 Bokeo 20°38'31.4" 100°27'36.6" 495 78 107 E2 Ib
274 Bio nio U 20090110 Bokeo 20°38'31.4" 100°27'36.6" 495 74 - - II
275 Eaten L 20090110 Bokeo 20°38'31.4" 100°27'36.6" 495 75 119 E2 II
276 Unknown ------65 107 E2 Ib
277 Ngo lea (Nockeo) U 20081221 Phongsaly 21°10'43.2 102°42'27.2" 350 88 - - Ib
278 Peak(Ngo pneur) U 20081221 Phongsaly 21°08'24.7" 102°40'24.1" 153 90 - - Ib
279 Tam L 20081222 Phongsaly 21°08'24.7" 102°40'24.1" 153 83 - - II
280 Thaopeng L 20081222 Phongsaly 21°08'24.7" 102°40'24.1" 153 85 - - II 281 Ngo yan U 20081222 Phongsaly 21°08'24.7" 102°40'24.1" 153 105 - - Ib
282 Thai L 20081221 Phongsaly 21°10'43.2 102°42'27.2" 350 105 114 L2 II
283 Chao deng U 20081223 Phongsaly 21°08'34.3" 102°38'19.1" 891 - - - Ib
284 Xang U 20081223 Phongsaly 21°08'34.3" 102°38'19.1" 891 55 140 E3 Ib
285 TDK1 L 20081224 Phongsaly 21°11'58.8" 107°42'56.9" 507 104 121 L2 II
286 Mak pao U 20081224 Phongsaly 21°11'58.8" 107°42'56.9" 507 - - - Ib
287 Chao na L 20081224 Phongsaly 21°11'58.8" 107°42'56.9" 507 78 - - II
288 Oheun thene U 20081224 Phongsaly 21°11'58.8" 107°42'56.9" 507 104 101 L2 Ib
289 Tam hom L 20081224 Phongsaly 21°11'58.8" 107°42'56.9" 507 97 84 L1 II
290 Boten L 20081221 Phongsaly 21°10'43.2 102°42'27.2" 350 64 - - II
291 Bo ten L 20081224 Phongsaly 21°11'58.8" 107°42'56.9" 507 70 151 E3 II
292 Nam nga L 20081226 Phongsaly 21°09'48.0" 102°46'10.2" 334 91 129 L2 II
293 Ngo lam dang U 20081226 Phongsaly 21°04'52.1" 102°34'38.9" 387 - - - Ib
294 Tam U 20081228 Phongsaly 21°04'52.1" 102°34'38.9" 387 - 123 - Ib
295 Ngo tem U 20081228 Phongsaly 21°04'52.1" 102°34'38.9" 387 74 94 E2 Ib
296 TDK1(Ni bon) L 20081228 Phongsaly 21°04'52.1" 102°34'38.9" 387 95 121 L2 II
297 Leu U 20081221 Phongsaly 21°10'43.2 102°42'27.2" 350 70 129 E2 Ib
298 Temior L 20081231 Leuang Namtha 20°41'00.9" 101°00'35.0" 673 76 - - II
299 Niew na L 20081231 Leuang Namtha 20°44'36.1" 101°01'03.7" 761 79 137 E3 II
300 Niew na kang L 20081231 Leuang Namtha 20°44'36.1" 101°01'03.7" 761 102 163 L3 II
301 Chao na tam L 20081231 Leuang Namtha 20°44'36.1" 101°01'03.7" 761 90 121 L2 II
302 Chao tam/hor chea L 20081231 Leuang Namtha - - - 78 114 E2 II
303 Hor yor U 20090103 Leuang Namtha 20°49'12.7" 101°00'39.9" 883 63 137 E3 Ib
304 Eator L 20090103 Leuang Namtha 20°45'59.1" 101°12'32.0" 707 88 - - II
305 Tam(Hai) U 20081221 Phongsaly 21°10'43.2 102°42'27.2" 350 - - - Ib
306 Ng pen lor klok U 20090104 Leuang Namtha 20°45'59.1" 101°12'32.0" 707 76 135 E3 Ib 307 Ngo chari U 20090104 Leuang Namtha 20°45'59.1" 101°12'32.0" 707 83 107 E2 Ib
308 Ngo hiang U 20090105 Leuang Namtha 20°33'13.3" 101°07'44.0" 761 69 - - Ib
309 Ngo bay U 20090105 Leuang Namtha 20°33'13.3" 101°07'44.0" 761 71 - - Ib
310 Ngo cha nga U 20090105 Leuang Namtha 20°33'13.3" 101°07'44.0" 761 88 137 E3 Ib
311 Khaipu U 20081221 Phongsaly 21°10'43.2 102°42'27.2" 350 74 - - Ib
312 Ngo mahaxer U 20090105 Leuang Namtha 20°33'13.3" 101°07'44.0" 761 78 140 E3 Ib
313 Ngo par tar U 20090105 Leuang Namtha 20°33'13.3" 101°07'44.0" 761 62 141 E3 Ib
314 Unknown ------82 122 E2 II
Supplemental Table 2. SSR markers used for polymorphism analysis
Map Marker No.of Chr. position Repeat motief Forward Primer Reverse Primer name bands (cM)
1 RM495 0.3 (CTG)7 AATCCAAGGTGCAGAGATGG CAACGATGACGAACACAACC 3 RM1 29.7 (GA)26 GCGAAAACACAATGCAAAAA GCGTTGGTTGGACCTGAC 5 RM8111 30.8 (CT)30 AGGTAACTAAGCTAGGTGTT TAGGTACAGTAATACCAAGC 2 RM3604 26.8 (GA)13 ATGTCAGACTCCGATCTGGG TCTTGACCTTACCACCAGGC 2 RM259 38.8 (CT)17 TGGAGTTTGAGAGGAGGG CTTGTTGCATGGTGCCATGT 3 RM6840 181.1 (TCT)17 TACCAAGACTCCGCTATGGC GAAGAAGGGATCATGGATCG 3 RM8137 181.1 (AT)54 GTAATTGAATTTCACTGCTGCT ACGTACGTGACGTGCTTATG 5 2 RM3865 21.1 (GA)29 AACCATGGACAGTTGAACAC CTCCGACAAGAACTTCCTC 3 RM1347 26.9 (AG)23 AACAAATTAAACTGCCAAG GTCTTATCATCAGAACTGGA 3 RM6378 28.0 (GAA)19 ATAGGGTGGGTGTGCTGAAC TGCACAAAACTGCAGGTCTC 4 RM324 51.1 (CAT)21 CTGATTCCACACACTTGTGC GATTCCACGTCAGGATCTTC 3 RM262 81.4 (CT)16 CATTCCGTCTCGGCTCAACT CAGAGCAAGGTGGCTTGC 2 RM3874 94.3 (GA)51 TGGGTGATCTTAGTTTGGCC AATGTGCCTGCACATGTCAC 3 RM1367 110.9 (AG)27 GCATCGTTCATGTACACTGG CTGCTACGCTGCTACTCCTAG 4 RM240 135.5 (CT)21 CCTTAATGGGTAGTGTGCAC TGTAACCATTCCTTCCATCC 2 RM406 156.3 (GA)17 GAGGGAGAAAGGTGGACATG TGTGCTCCTTGGGAAGAAAG 4 3 RM6959 65.4 (TTC)9 TCCTATGGAGGATTGTTGCC CGGAGGAGCAGAACAAAAAC 4 RM8208 88.7 (AGA)12 GCCCAAACTACACTCTCTTG GTAAATGCCTGAGTGCCTAC 5 RM168 122.8 T15(GT)14 TCCTCCATCTCCTCCGCTCCCG GGGCGTGGTGGCCTTCTTCGTC 2 RM8203 140.1 (GA)24 CATTGATAATGTCCAGTGACG CTCCTGTTGTCATTCTTTGG 3 RM7000 152.2 (TTG)10 CCCTTCTTTTCAACTGAATA TTGTAACAATGAACTCGTTC 4 RM7389 164.4 (GATA)7 AGCGACGGATGCATGATC TTGAGCCGGAGGTAGTCTTG 3 4 RM8213 10.7 (TC)10 AGCCCAGTGATACAAAGATG GCGAGGAGATACCAAGAAAG 4 RM3317A 25.4 (CT)14 CCTGACAGAAGAATGGTACACC TGTGGCTTCTCGTTGAGTTG 2 RM5586 56.1 (TG)30 CTCCATAATCAAGGAAGCTA ATGAGTTCTTTCGTCAGTGT 3 RM3524 68.3 (CT)31 CGGAGCTGGTCTAGCCATC GTCTCCGTCTTCCTCACTCG 4 RM3367 74.5 (CT)16 GGATCCATCCATCCACTGAC GGATATGTGCTGCTGTGTGC 4 RM3836 108.2 (GA)22 ACTGTGGAGTACAGGTCGGC GAAACGGAAACGAAACCCTC 3 RM124 128.8 (TC)10 ATCGTCTGCGTTGCGGCTGCTG CATGGATCACCGAGCTCCCCCC 4 5 RM413 26.7 (AG)11 GGCGATTCTTGGATGAAGAG TCCCCACCAATCTTGTCTTC 4 RM267 25.0 (GA)21 TGCAGACATAGAGAAGGAAGTG AGCAACAGCACAACTTGATG 2 RM405 24.7 (AC)14 TCACACACTGACAGTCTGAC AATGTGGCACGTGAGGTAAG 3 RM1089 37.2 (AC)33 CAGAAGGATTATCTCGATACC AATAGGGCTTGAAATAAATTG 1 RM3663 87.4 (GA)14 CATCAACCTCCACGAACATG CTCGGTGGTGATCCTCCTC 4 RM3476 101.0 (CT)22 GATTCTCGTCGTAATCAAGA ATCCACGGTTAAGATAAATG 4 RM3790 107.7 (GA)19 TAATTGCGGTCTCGTGCC AACCACCTCAACTACTGCCG 4 RM6313 116.5 (CTT)11 ATCCAGATCCACTTTGACCG GGAGGACTTCTACCATCCTTG 2 6 RM508 2.3 (AG)17 GGATAGATCATGTGTGGGGG ACCCGTGAACCACAAAGAAC 3 RM510 11.5 (GA)15 AACCGGATTAGTTTCTCGCC TGAGGACGACGAGCAGATTC 3 RM276 33.5 (AG)8A3(GA)33 CTCAACGTTGACACCTCGTG TCCTCCATCGAGCAGTATCA 4 RM162 108.3 (AC)20 GCCAGCAAAACCAGGGATCCGG CAAGGTCTTGTGCGGCTTGCGG 5 RM3138 110.6 (CA)16 TTGACAAGAGATCAAGGCGG GTGAATGTTGAGCTGCATGG 4 7 RM1134 25.4 (AG)12 ACACCCAACTTTTCTCACGC AGCTAGGGTTTCGATCTCCC 2 RM7121 41.7 (ATAA)6 GGAGATGGCACACGTCAAAC AGGATCCCGTTTTGTAGCAG 2 RM11 67.0 (GA)17 TCTCCTCTTCCCCCGATC ATAGCGGGCGAGGCTTAG 4 RM234 93.9 (CT)25 ACAGTATCCAAGGCCCTGG CACGTGAGACAAAGACGGAG 4 8 RM408 0.5 (CT)13 CAACGAGCTAACTTCCGTCC ACTGCTACTTGGGTAGCTGACC 2 RM152 3.3 (GGC)10 GAAACCACCACACCTCACCG CCGTAGACCTTCTTGAAGTAG 3 RM1235 12.8 (AG)15 GAAAACTAAAAAGCAGAGGA AAGCTATCCATTTTGGATTA 4 RM3395 52.9 (CT)17 ACCTCATGTCCAGGTGGAAG AGATTAGTGCCATGGCAAGG 6 RM3153A 66.5 (CA)25 CACAAAGTTTCAAATATAGC GATCTCATGATAGTCACTCA 6 RM7356 78.5 (CTAT)6 CCAAGGACACATATGCATGC GCAATTCATGGCGCTGTTC 4 RM284 78.5 (GA)8 ATCTCTGATACTCCATCCATCC CCTGTACGTTGATCCGAAGC 2 RM6948 114.4 (TTC)8 GGTAAGTTGTCGGTTGCCTC ACGTCCATACCAGGTCAAGC 2 9 RM7048 62.4 (AATA)8 CAACCCCTAATTTCACGCTC GACTTCACTGGCACTGGATG 4 RM3164 72.1 (CT)12 TCCTCCTGCTAGCTGCCTAG TCGCCTTCCTTTTCACTCAC 5 10 RM8201 26.1 (CT)13 TCTGTTTATAAGCGCAGCAC GCCGGCGAGCTACTACTAC 2 RM258 48.8 (GA)21(GGA)3 TGCTGTATGTAGCTCGCACC TGGCCTTTAAAGCTGTCGC 4 RM171 55.6 (GATG)5 AACGCGAGGACACGTACTTAC ACGAGATACGTACGCCTTTG 4 RM271 59.4 (GA)15 TCAGATCTACAATTCCATCC TCGGTGAGACCTAGAGAGCC 4 11 RM5704 28.6 (AAT)20 TTTCAGTGCATGTCTTCG GATTGTATGCATGGTTCAAAG 6 RM552 40.6 (TAT)13 CGCAGTTGTGGATTTCAGTG TGCTCAACGTTTGACTGTCC 6 RM21 85.7 (GA)18 ACAGTATTCCGTAGGCACGG GCTCCATGAGGGTGGTAGAG 5 12 RM247 26.7 (CT)16 TAGTGCCGATCGATGTAACG CATATGGTTTTGACAAAGCG 6 RM7619 38.1 (TGTA)13 CTTGGTATGTATTGGCAGCG GAGGCAATAGGAGGGGAGAG 3 RM7376 89.5 (GAAA)6 TCACCGTCACCTCTTAAGTC GGTGGTTGTGTTCTGTTTGG 2 RM17 107.4 (GA)21 TGCCCTGTTATTTTCTTCTCTC GGTGATCCTTTCCCATTTCA 3 Total: 234
A total of 67 SSR markers were used. Motifs of SSR markers, positions, and oligo sequences are drawn from http://www.gramene.org.