Borreliella burgdorferi B31 NC_001318

by Pallavi Subhraveti1, Ingrid Keseler1, Anamika Kothari1, Ron Caspi1, Peter D Karp1 --- 1SRI International Legend: Protein gene Transcription Start Adjacent genes drawn in the same color are within the same operon.

This diagram was automatically generated by SRI International Pathway Tools version 25.0, authors M. Krummenacker and P.D. Karp. RNA gene Terminator Uncolored genes are not yet assigned to an operon. Pseudo-genes are crossed out with a big, diagonal X.

BB_0003 BB_0010 BB_0016 queA BB_0029 BB_0001 BB_0002 BB_0004 : phosphoglucomutase trpS BB_0006 BB_0007 BB_0008 BB_0009 BB_0011 truA BB_0013 priA : primosomal protein N udk BB_0017 BB_0018 BB_0019 BB_0020 ruvB ruvA BB_0024 BB_0025 BB_0026 BB_0027 BB_0028 lepB lepB BB_0032 smpB BB_0034 BB_0035 BB_0036 BB_0037

2,000 4,000 6,000 8,000 10,000 12,000 14,000 16,000 18,000 20,000 22,000 24,000 26,000 28,000 30,000 32,000 34,000 36,000 BB_0044 BB_0047 BB_0054 ftsY BB_0038 BB_0039 cheR phoU BB_0043 BB_0045 : P115 protein rnhB BB_0050 BB_0051 BB_0052 ung tpiA pgk gap BB_0058 : hypothetical protein BB_0059 BB_0060 trx BB_0062 BB_0063 fmt def BB_0066 BB_0067 : peptidase BB_0068 BB_0069 BB_0070 BB_0071 BB_0072 : membrane protein BB_0073 prfB BB_0075

38,000 40,000 42,000 44,000 46,000 48,000 50,000 52,000 54,000 56,000 58,000 60,000 62,000 64,000 66,000 68,000 70,000 72,000 BB_0078 BB_0083 BB_0085 BB_0097 ftsY BB_0077 BB_0080 BB_0081 BB_0082 BB_0084 BB_0086 BB_0087 BB_0088 BB_0089 BB_0090 BB_0091 BB_0092 BB_0093 BB_0094 BB_0095 BB_0096 BB_0098 : endonuclease MutS2 rsgA murI asnS BB_0102 BB_0103 BB_0104 map BB_0106 nusB BB_0108 BB_0109 BB_0110

74,000 76,000 78,000 80,000 82,000 84,000 86,000 88,000 90,000 92,000 94,000 96,000 98,000 100,000 102,000 104,000 106,000 108,000 BB_0110 BB_0115 uppS BB_0124 BB_0139 BB_0140 : BB_0140-MONOMER BB_0143 BB_0145 dnaB rplI rpsR BB_0114 BB_0116 BB_0117 rseP cdsA frr tsf rpsB BB_0125 BB_0126 BB_0127 cmk BB_0129 BB_0130 recA BB_0132 BB_0133 BB_0134 hisS BB_0136 BB_0137 BB_0141 BB_0142 BB_0144

110,000 112,000 114,000 116,000 118,000 120,000 122,000 124,000 126,000 128,000 130,000 132,000 134,000 136,000 138,000 140,000 142,000 144,000 BB_0156 BB_0157 BB_0168 infA BB_0145 BB_0146 BB_0147 BB_0149 nagA nagB BB_0153 secA : protein subunit SecA BB_0155 BB_0158 BB_0159 alr BB_0161 BB_0163 BB_0164 BB_0165 malQ BB_0167 BB_0170 : hypothetical protein BB_0171 BB_0172 BB_0173 BB_0174 BB_0175 BB_0176 : ATPase gidB gidA trmE

146,000 148,000 150,000 152,000 154,000 156,000 158,000 160,000 162,000 164,000 166,000 168,000 170,000 172,000 174,000 176,000 178,000 180,000 182,000 BB_0183 csrA BB_0186BB_0187 rpmI galU trmE BB_0180 flgK flgL BB_0185 rplT infC BB_0192 BB_0193 BB_0194 BB_0195 prfA BB_0197 BB_0198 BB_0199 : hypothetical protein BB_0200 BB_0201 BB_0202 : hemolysin hflK hflC BB_0205 BB_0206 BB_0208 BB_0209 BB_0210 : hypothetical protein BB_0211 BB_0212

184,000 186,000 188,000 190,000 192,000 194,000 196,000 198,000 200,000 202,000 204,000 206,000 208,000 210,000 212,000 214,000 216,000 218,000 BB_0223BB_0224 rpmE BB_0231 BB_0242 BB_0213 efp BB_0215 pstC pstA pstB BB_0219 BB_0220 BB_0221 BB_0222 BB_0225 serS BB_0227 BB_0228 : hypothetical protein rho hbb rpsT BB_0234 ychF BB_0236 : hypothetical protein lnt BB_0238 BB_0239 BB_0240 glpK : glycerol BB_0243 BB_0244 BB_0245 BB_0246 rdgB pepF : oligoendopeptidase F

220,000 222,000 224,000 226,000 228,000 230,000 232,000 234,000 236,000 238,000 240,000 242,000 244,000 246,000 248,000 250,000 252,000 254,000 rpsU BB_0266 BB_0277 BB_0249 BB_0250 leuS : leucine--tRNA BB_0252 : hypothetical protein lon : ATP-dependent protease La recJ BB_0255 BB_0257 : DNA translocase FtsK BB_0258 BB_0259 BB_0260 BB_0261 BB_0262 lepB BB_0264 BB_0265 BB_0267 : hypothetical protein BB_0268 BB_0269 BB_0270 flhA flhB fliR fliQ fliP BB_0276 fliM fliL

256,000 258,000 260,000 262,000 264,000 266,000 268,000 270,000 272,000 274,000 276,000 278,000 280,000 282,000 284,000 286,000 288,000 290,000 fliL BB_0287 BB_0305 BB_0280 BB_0281 BB_0283 flgD BB_0285 BB_0286 fliI fliH fliG fliF fliE flgC flgB hslU BB_0296 BB_0297 BB_0298 ftsZ ftsA BB_0301 ftsW mraY BB_0304 BB_0306 BB_0307 BB_0308 BB_0309 BB_0311 BB_0312 rrmJ BB_0314 BB_0315 BB_0316 BB_0317 BB_0318 BB_0319 BB_0322

292,000 294,000 296,000 298,000 300,000 302,000 304,000 306,000 308,000 310,000 312,000 314,000 316,000 318,000 320,000 322,000 324,000 326,000 BB_0324 BB_0323 BB_0325 BB_0326 : hypothetical protein BB_0327 BB_0328 BB_0329 BB_0330 BB_0332 BB_0333 BB_0334 BB_0335 BB_0336 eno : enolase rpsI rplM BB_0340 BB_0341 BB_0342 gatC BB_0344 : DNA helicase BB_0345 BB_0346 BB_0347 pyk : BB_0349 rpmB BB_0351 BB_0352 BB_0353 : membrane protein

328,000 330,000 332,000 334,000 336,000 338,000 340,000 342,000 344,000 346,000 348,000 350,000 352,000 354,000 356,000 358,000 360,000 362,000 364,000 BB_0357 BB_0360 BB_0367 BB_0379 BB_0354 BB_0355 BB_0358 BB_0359 : peptidase S41 BB_0361 lgt BB_0363 : hypothetical protein mgsA la7 BB_0366 BB_0368 BB_0369 tyrS glyS gltX BB_0373 BB_0374 pfs metK luxS BB_0378 mgtE BB_0381 bmpB bmpA bmpC bmpD rpsG rpsL rpoC

366,000 368,000 370,000 372,000 374,000 376,000 378,000 380,000 382,000 384,000 386,000 388,000 390,000 392,000 394,000 396,000 398,000 400,000 secE rpmG BB_0404 BB_0411 rpoC rpoB rplL BB_0391 rplA rplK nusG BB_0397 BB_0398 BB_0399 BB_0400 BB_0401 proS BB_0403 BB_0405 BB_0406 manA BB_0408 BB_0409 BB_0412 BB_0413 BB_0414 BB_0415 BB_0416 BB_0417 BB_0418 BB_0419 BB_0420 : sensory transduction 23S_rrlA : 23S ribosomal RNA

402,000 404,000 406,000 408,000 410,000 412,000 414,000 416,000 418,000 420,000 422,000 424,000 426,000 428,000 430,000 432,000 434,000 436,000 BB_0428 BB_0429 BB_0439 BB_0448BB_0449 23S_rrlA 23S_rrlB : 23S ribosomal RNA BB_0421 BB_0422 16S : 16S ribosomal RNA BB_0426 BB_0427 BB_0430 BB_0431 BB_0432 BB_0434 gyrA gyrB dnaA dnaN rnpA BB_0442 BB_0443 BB_0444 fbaA aspS BB_0447 : Na+/H+ antiporter rpoN BB_0451 BB_0452 BB_0453

438,000 440,000 442,000 444,000 446,000 448,000 450,000 452,000 454,000 456,000 458,000 460,000 462,000 464,000 466,000 468,000 470,000 472,000 BB_0475 rpmC rpsN BB_0496 BB_0454 BB_0455 BB_0456 uvrC BB_0458 BB_0459 BB_0460 BB_0461 efbC BB_0463 BB_0464 BB_0465 BB_0466 BB_0467 BB_0468 lspA BB_0471 murA BB_0473 tuf rpsJ rplC rplD rplW rplB rpsS rplV rpsC rplP rpsQ rplN rplX BB_0490 rpsH BB_0493 rplR rpsE rplO BB_0498 rpsM rpsK rpoA rplQ BB_0504

474,000 476,000 478,000 480,000 482,000 484,000 486,000 488,000 490,000 492,000 494,000 496,000 498,000 500,000 502,000 504,000 506,000 508,000 510,000 BB_0511 BB_0516 BB_0522 BB_0525 BB_0530 BB_0532 BB_0504 BB_0505 BB_0506 BB_0507 engA : GTPase Der BB_0509 BB_0512 : hypothetical protein BB_0513 pheT trxB dnaJ dnaK : chaperone protein DnaK grpE BB_0524 BB_0526 BB_0527 BB_0528 BB_0531 BB_0533 xth BB_0535 BB_0536 : zinc protease

512,000 514,000 516,000 518,000 520,000 522,000 524,000 526,000 528,000 530,000 532,000 534,000 536,000 538,000 540,000 542,000 544,000 546,000 BB_0538 BB_0549 BB_0551 BB_0557 BB_0566 BB_0536 BB_0537 BB_0539 fusA : elongation factor G BB_0542 BB_0543 BB_0544 BB_0545 : xylulokinase BB_0546 coaE polA : DNA I fliS ligA : DNA ligase BB_0553 BB_0554 : hypothetical protein BB_0555 BB_0556 ptsP BB_0559 BB_0560 gnd BB_0562 BB_0563 BB_0564 BB_0565 BB_0567 BB_0568 BB_0569

548,000 550,000 552,000 554,000 556,000 558,000 560,000 562,000 564,000 566,000 568,000 570,000 572,000 574,000 576,000 578,000 580,000 582,000 BB_0570 BB_0569 BB_0571 BB_0572 BB_0573 BB_0574 pyrG : CTP synthetase BB_0576 BB_0577 BB_0578 BB_0579 : DNA polymerase III subunit alpha BB_0580 recG BB_0582 BB_0583 BB_0584 murD BB_0586 metG : methionine--tRNA ligase BB_0588 pta ksgA BB_0591 BB_0592 BB_0593 argS : arginine--tRNA ligase BB_0595 BB_0596 BB_0597

584,000 586,000 588,000 590,000 592,000 594,000 596,000 598,000 600,000 602,000 604,000 606,000 608,000 610,000 612,000 614,000 616,000 618,000 BB_0617 BB_0597 murB cysS BB_0600 glyA BB_0602 p66 BB_0604 BB_0605 BB_0606 pcrA BB_0608 tig : trigger factor clpP clpX lon : ATP-dependent protease La rpsD BB_0616 cdd BB_0619 BB_0620 BB_0621 ackA mfd : transcription-repair coupling factor BB_0624 BB_0625

620,000 622,000 624,000 626,000 628,000 630,000 632,000 634,000 636,000 638,000 640,000 642,000 644,000 646,000 648,000 650,000 652,000 654,000 BB_0631 recC : BB_0634-MONOMER BB_0650BB_0651 BB_0625 rnmV BB_0627 BB_0628 BB_0629 pfkB recD recB pncB zwf BB_0637 BB_0638 BB_0639 BB_0640 BB_0641 BB_0642 ylqF BB_0644 BB_0645 BB_0646 bosR BB_0648 groL : chaperonin GroEL secD

656,000 658,000 660,000 662,000 664,000 666,000 668,000 670,000 672,000 674,000 676,000 678,000 680,000 682,000 684,000 686,000 688,000 690,000 692,000 BB_0661 BB_0662 secD secF BB_0654 BB_0655 BB_0656 rpiA BB_0658 lysS era BB_0663 BB_0664 BB_0665 BB_0666 BB_0667 BB_0668 BB_0669 : chemotaxis protein CheA BB_0670 BB_0671 BB_0672 BB_0673 BB_0674 BB_0675 BB_0676 rbsA BB_0678 BB_0679 BB_0680 BB_0681 trmU BB_0683 fni BB_0685 mvaD

694,000 696,000 698,000 700,000 702,000 704,000 706,000 708,000 710,000 712,000 714,000 716,000 718,000 720,000 722,000 724,000 726,000 728,000 BB_0696 rpmF acpP BB_0708 dnaG : BB_0710-MONOMER BB_0687 mvk BB_0689 napA fusA : elongation factor G BB_0693 ffh rpsP rimM trmD rplS BB_0701 coaD rnc BB_0706 BB_0707 BB_0709 BB_0712 BB_0713 BB_0714 BB_0715 mreC BB_0717 BB_0718 mrdB thrS pgsA BB_0722 BB_0723 BB_0724 BB_0725 BB_0726

730,000 732,000 734,000 736,000 738,000 740,000 742,000 744,000 746,000 748,000 750,000 752,000 754,000 756,000 758,000 760,000 762,000 764,000 BB_0726 BB_0731 BB_0758 BB_0727 cdr BB_0729 pgi BB_0732 : penicillin-binding protein BB_0733 BB_0734 BB_0735 BB_0737 valS : valine--tRNA ligase BB_0739 BB_0740 groS BB_0742 BB_0743 p83/100 : p83/100 antigen BB_0745 BB_0746 BB_0747 BB_0748 BB_0749 BB_0751 BB_0752 BB_0753 BB_0754 rnz BB_0756 clpP

766,000 768,000 770,000 772,000 774,000 776,000 778,000 780,000 782,000 784,000 786,000 788,000 790,000 792,000 794,000 796,000 798,000 800,000 BB_0758 BB_0760 BB_0771a BB_0779rpmA BB_0784 BB_0785 BB_0759 BB_0761 BB_0763 BB_0764 BB_0765 cvpA murG BB_0768 BB_0769 BB_0770 rpoS BB_0772 BB_0773 flgG BB_0775 BB_0776 apt rplU BB_0781 nadD BB_0783 BB_0786 pth tilS BB_0789 BB_0790 BB_0791 BB_0792 tmk BB_0794 : hypothetical protein BB_0795

802,000 804,000 806,000 808,000 810,000 812,000 814,000 816,000 818,000 820,000 822,000 824,000 826,000 828,000 830,000 832,000 834,000 836,000 BB_0815 rpoZ BB_0823 BB_0795 BB_0796 mutS : DNA mismatch repair protein MutS BB_0798 BB_0799 BB_0800 BB_0801 rbfA truB rpsO BB_0805 BB_0806 : lipoprotein BB_0807 BB_0808 tgt mviN BB_0811 coaBC panF BB_0816 murC BB_0818 BB_0819 miaA BB_0824 BB_0825 BB_0826 BB_0827 : ATP-dependent helicase topA : DNA topoisomerase I

838,000 840,000 842,000 844,000 846,000 848,000 850,000 852,000 854,000 856,000 858,000 860,000 862,000 864,000 866,000 868,000 870,000 872,000 874,000 BB_0845b BB_0849a BB_0849b BB_0853 topA BB_0829 BB_0830 : exonuclease SbcC BB_0831 BB_0832 ileS : isoleucine--tRNA ligase BB_0834 BB_0835 uvrB uvrA BB_0838 : hypothetical protein BB_0838a BB_0839 BB_0840 : lipoprotein arcA argF BB_0843 BB_0844 BB_0852

876,000 878,000 880,000 882,000 884,000 886,000 888,000 890,000 892,000 894,000 896,000 898,000 900,000 902,000 904,000 906,000 908,000 910,000