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1 Histophilus somni Survives in Bovine Macrophages by Interfering with

2 Phagosome-Lysosome Fusion, but Requires IbpA for Optimal Serum

3 Resistance

4 Yu Pan1, Yuichi Tagawa2, Anna Champion1, Indra Sandal1,¶, and Thomas J. Inzana1,3*

5

6 1 Department of Biomedical Sciences and Pathobiology, Virginia-Maryland College of

7 Veterinary Medicine, Virginia Tech, Life Sciences 1, 970 Washington Street, SW, Blacksburg,

8 VA 24061, U.S.A.

9 2Bacterial and Parasitic Disease Research Division, National Institute of Animal Health,

10 National Agriculture and Food Research Organization, 3-1-5 Kannondai, Tsukuba, Ibaraki

11 305-0856, Japan

12 3Virginia Tech Carilion School of Medicine, Roanoke, VA 24016

13

14 ¶Current Address: Memphis VA Medical Center, 1030 Jefferson Avenue, Memphis TN

15 38104 USA

16

17 *Corresponding Author: Email: [email protected]

18

19 Running title: Intracellular survivial of H. somni

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20 ABSTRACT

21 Histophilus somni survives intracellularly in professional phagocytic cells, but the

22 mechanism of intracellular survival is not understood. The Fic motif within the DR1/DR2 IbpA

23 fibrillar network protein of H. somni is cytotoxic to epithelial and phagocytic cells, which may

24 interfere with the bactericidal activity of these cells. To determine the contribution of IbpA and

25 Fic on resistance to host defenses, strains and mutants that lack all of or a small region of ibpA or

26 DR1/DR2 were tested for survival in bovine monocytic cells and for serum susceptibility. A

27 mutant lacking IbpA, but not DR1/DR2, was more susceptible to killing by antiserum than the

28 parent. H. somni strains expressing IbpA replicated in bovine monocytes for at least 72 hours,

29 and were toxic for these cells. Virulent strain 2336 with transposon insertions or deletions within

30 IbpA remained toxic for bovine monocytes. However, strain 2336 mutants lacking all of ibpA or

31 both DR1/DR2 were not toxic to the monocytes, but survived within the monocytes for at least

32 72 hours. Examination of intracellular trafficking of H. somni with monoclonal antibodies to

33 early and late phagosomal markers indicated that early phagosomal marker EEA-1 colocalized

34 with both disease isolate strain 2336 and serum-sensitve mucosal isolate strain 129Pt, but only

35 strain 2336 did not co-localize with late lysosomal marker LAMP-2 and prevented acidification

36 of phagosomes. These results indicate that virulent isolates of H. somni are capable of surviving

37 within phagocytic cells through interference of phagosome-lysosome maturation. Therefore, H.

38 somni may be considered a permissive intracellular pathogen.

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39

40 Key words: Histophilus somni, , IbpA, monocytes, Fic motif, bactericidal,

41 intracellular

42

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43 The gram-negative bacterium Histophilus somni is an opportunistic pathogen associated with

44 bovine respiratory disease and multi-systemic diseases in cattle and sometimes , including

45 thrombotic meningoencephalitis (TME), , arthritis, mastitis, reproductive failure and

46 , and others; probably resulting from bacteremia (1). However, some strains of H. somni

47 are serum-sensitive, and at least one such strain (129Pt) lacks many of the factors

48 associated with disease isolates (2). The only known reservoir for H. somni are the mucosal sites of

49 ruminants (3).

50 Virulent strains of H. somni possess a wide variety of physiological properties and

51 mechanisms that primarily protect the bacteria from host defenses or modulate host immune cells.

52 Such mechanisms include phase variation of lipooligosaccharide (LOS), modification of LOS

53 with sialic acid and phosphorylcholine (4), apoptosis of endothelial cells and neutrophils with

54 disruption of intercellular junctions (5), and formation (6). Furthermore, the bacteria

55 secrete a fibrillar and surface-associated immunoglobulin binding protein (IbpA), of which the

56 N-terminus region is capable of binding immunoglobulins through their Fc component, and may

57 also mediate adherence of the bacteria to host cells (7).The COOH-terminus of IbpA has

58 homology to a region in YopT in Yersinia spp., but lacks cytotoxic activity (8). In contrast,

59 sequence analysis of ibpA indicates that there are two direct repeats (DR1 and DR2) just upstream

60 of the the yopT-like region, both of which contain a filamentation-induced by c-AMP (Fic) motif:

61 HPFxxGNGR (8). These Fic domains can be found in both bacterial and eukaryotic cells . In H.

62 somni, the Fic motifs of both DR1 and DR2 have been shown to be toxic for bovine epithelial and

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63 phagocytic cells, resulting in rounding up of the cells, increased detachment of infected

64 macrophages, and disruption of actin fibers (9, 10). H. somni strain 2336 can inhibit phagocytosis

65 of microspheres by primary bovine monocytes, but a mutant with essentially the entire ibpA

66 deleted can not (9). Antibodies to the recombinant DR2 region of IbpA neutralize the cytotoxic

67 effect on these cells (11). Immunization of mice and calves with recombinant DR2 also protects

68 the animals from H. somni bacteremia and , respectively (12, 13). The presence of IbpA

69 on H. somni strains is also associated with serum resistance (7).

70 Virulent strains of H. somni are capable of surviving within bovine polymorphonuclear

71 leukocytes (PMNs), monocytes, and macrophages (14, 15). Phagocytic cells infected with live H.

72 somni are less capable of internalizing a secondary target, such as opsonized Staphylococcus

73 aureus and microspheres (16, 17). Killed, whole bacteria or supernatant from heat-killed bacteria

74 can also inhibit the internalization of S. aureus by PMNs, but not bovine macrophages (16, 17).

75 We have previously reported that the oxidative burst generated by phagocytic cells in contact with

76 viable disease isolates of H. somni is significanlty inhibited. However, there is no inhibition of the

77 oxidative burst by killed H. somni, nonvirulent mucosal strain 129Pt, and heterologous strains that

78 include and Brucella abortus (18). The mechanism by which H. somni

79 survives within phagocytic cells remains unclear. Because the Fic motifs within IbpA are toxic to

80 phagocytic cells and induce disruption of actin filaments, it is possible that H. somni survives

81 intracellular killing through Fic-mediated interference of phagocytotic cell functions. In this study,

82 we used various mutants with transposon (Tn) insertions and in-frame deletions in ibpA to

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83 examine the contribution of IbpA and the Fic motifs to serum susceptibility and intracellular

84 killing of H. somni, and how virulent disease isolates and avirulent isolates traffic within bovine

85 monocytes.

86

87 RESULTS

88 Intracellular survival of H. somni in bovine monocyte (BM) and bovine peripheral blood

89 monocyte cells (BPBM). Several macrophage or monocyte cell lines, including BM, bovine

90 FBM-17, mouse J774A.1, and human THP cells, were examined for the capability of H. somni

91 strain 2336 to survive intracellularly in comparison to freshly collected BPBM (data not shown).

92 The BM cell line was found to be most comparable to BPBM in regard to intracellular survival or

93 killing of H. somni. H. somni pathogenic strain 2336 survived in BPBM and was cytotoxic to these

94 cells resulting in detachment and rounding up of the cells (data not shown), as previously

95 described for FBM-17 cells (9). In contrast mucosal strain 129Pt from the healthy prepuce was not

96 cytotoxic and did not survive in BM cells (Fig. 1). Strain 2336 was also capable of replicating in

97 the BM cell line, but strain 129Pt was not, which was similar to the results obtained with PMBC

98 (Fig. 1). Mouse macrophage cell line J774.1 and human leukemic cell line THP-1 were also tested,

99 but were unable to kill strain 129Pt (data not shown). Therefore, BM cells were used for all

100 subsequent studies.

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101 Several H. somni strains from disease sites and healthy mucosal sites were tested for their

102 ability to survive within BM cells following phagocytosis. The intracellular number of all isolates

103 from disease sites and some isolates from healthy genital sites increased after 24 h co-incubation

104 with the monocytes (Fig. 2). The Fic domains within DR1/DR2 of IbpA have been shown to be

105 cytotoxic to host cells (9), and the presence or absence of ibpA in all the H. somni strains used in

106 this study has been previously documented (Table 1) (19). All the disease isolates and most of the

107 vaginal isolatess tested were able to replicate intracellularly, but most preputial isolates tested did

108 not (Table 1 and Fig. 2). Strains 1P, 129Pt, 130Pf, and 133P from the bovne prepuce do not

109 produce IbpA (19) and were unable to replicate intracellularly after 24 h co-incubation (Table 1

110 and Fig. 2). However, some preputial isolates previously shown to produce IbpA (24P, 124P, and

111 20P) were also killed by BM cells, though preputial IbpA-producing strain 22P was resistant. Of

112 interest was that strain 1225, which was isolated from the bovine prepuce in The Netherlands, was

113 highly resistant to intracellular killing, but it was unknown whether this isolate was associated with

114 disease or expressed IbpA. Therefore, the expresion of IbpA was not universally associated with

115 intracellular survival.

116 The role of IbpA in intracellular survival of H. somni. To assess the direct effect of IbpA

117 on H. somni intracellular survival, BM cells were incubated for 2 hrs with H. somni culture

118 supernatant concentrated 1:4 or 1:20 to enrich for IbpA, then infected with H. somni strain 129Pt,

119 which cannot survive intracellularly. After 24 h incubation the intracellular survival of strain

120 129Pt in BM cells incubated with culture supernatant concentrated 1:4 or 1:20 was significantly (p

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121 < 0.001) greater than for the bacteria within monocytes not incubated with IbpA, and this effect

122 was dose-dependent (Fig. 3). These results indicated that IbpA had a negative effect on BM cells to

123 subsequently take up and/or kill strain 129Pt. IbpA (20-fold concentrate) also significantly

124 enhanced the intracellular survival of the other H. somni strains (24 h incubation in monocytes)

125 that were not as susceptible to intracellular killing as strain 129Pt, but also lacked the ibpA gene

126 (1P, 133P, and 130Pf; p = 0.004, 0.001, and 0.005, respectively), although not to the extent as for

127 strain 129Pt (Fig. 4). However, the addition of IbpA only moderately enhanced intracellular

128 survival of strain 24P and, had no effect on strains 124P and 20P, (Fig. 4), all of which, as expected,

129 produce IbpA (19).

130 Survival of H. somni ibpA mutants in BM cells. Several mutants with Tn insertion

131 mutations in ibpA were selected from a bank of Tn mutants for intracellular survivial in BM cells.

132 All the mutants replicated significantly more slowly than the parent strain at 24 h post-incubation

133 with BM cells (p < 0.001), but none of the mutants demonstrated a significant difference in the

134 number of viable intracellular bacteria after 48 or 72 h of incubation (p > 0.05) (data not shown).

135 However, all of these mutants contained the Tn in the region encoding for Fc binding by IbpA, and

136 none contained the tranposon within the DR1/DR2 region. Mutants with the ibpA gene replaced

137 with a KnR gene or with in-frame deletions in ibpA were also tested for intracellular survival (Fig.

138 5). Mutants with essentially the entire ibpA gene removed (2336ΔIbpA1) or both DR1 and DR2

139 (DR1/DR2) containing the Fic motifs (2336ΔIbpA9) were capable of surviving within BM cells as

140 effectively as parent strain 2336. Strains 2336ΔIbpA5 (deletion near 3’-terminus), 2336ΔA7 (DR2

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141 only deleted), 2336ΔA8 (DR1 only deleted), and 2336ΔA11 (deletion of R1R2 sequences) were

142 also no more susceptible to intracellular killing than the parent (data not shown). Therefore,

143 destruction of actin filaments and cell toxicity due to the Fic motifs were not, by themselves, the

144 mechanism by which H. somni survived within phagocytic cells. Furthermore, there was not a

145 significant difference between the presence or absence of IbpA, DR1/DR2, and uptake of the

146 bacteria.

147 Intracellular trafficking of H. somni within BM cells. Intracellular trafficking of pneumonia

148 isolate strain 2336 in comparison to mucosal isolate strain 129Pt was examined by confocal

149 microscopy to further clarify the mechanism of H. somni intracellular survival. Early phagosomal

150 marker EEA-1 and late lysosomal marker LAMP-2 were both expressed in BM and co-localized

151 with strain 129Pt with and without the addition of IbpA, and with strain 2336. Phagolysosomes

152 containing strain 129Pt with and without the addition of IbpA were also acidified and co-localized

153 with LAMP-2 (Figs. 6 and 7, p > 0.05). Therefore, intracellular trafficking of strain 129Pt in BM

154 was not affected by the addition of IbpA. However, although EEA-1 co-locallized with strain 2336,

155 the acidification of phagolysosomes and the expression/co-localization of LAMP-2 in BM cells

156 infected with strain 2336 was significantly lower than with strain 129Pt (Figs. 6 and 7, p = 0.008).

157 The vaginal isolates used in this study were also capable of surviving in BM, although these

158 isolates were not associated with disease. To compare the intracellular trafficking of a typical

159 vaginal isolate to disease isolate strain 2336, strain 64Vc was also examined by confocal

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160 microscopy. Strain 64Vc co-localized with early phagosomal marker EEA-1 10 min after infection,

161 but also inhibited the expression of LAMP-2 (p = 0.01) and the acidification of the phagosomes (p

162 = 0.001 compared to 129Pt) (Figs. 6 and 7).

163 Serum susceptibility of IbpA and DR1/DR2 mutants. Histophilus somni expression of IbpA

164 is also asociated with serum resistance (7). Therefore, we sought to determine if a normally serum

165 resistant strain becomes serum sensitive with the loss of IbpA or the DR1/DR2 regions. Serum

166 resistance is relative in H. somni; even “serum resistant” strains can be killed in the presence of

167 adequate antibodies to H. somni surface antigens. Therefore, to maximize the serum bactericidal

168 effect, antiserum to H. somni LOS was used in the presence of pre-colostral calf serum as an

169 antibody-free source of complement. In the absence of any antiserum, strain 2336 and mutants

170 lacking essentially all of IbpA (H. somniΔIbpA1) or both DR1 and DR2 (H. somniΔIbpA9)

171 increased in numbers, indicating these bacteria were resistant to the effects of complement alone

172 (Fig. 8). At 40% antiserum, all the strains were effectively killed. However, in the presence of

173 between 10% and 30% antiserum mutant H. somniΔ2336IbpA9, lacking DR1/DR2, was

174 significantly more resistant to killing than even strain 2336 (p <0.008), but H. somni mutant

175 2336ΔIbpA1 (lacking all of IbpA) was more susceptible to killing in 10% antiserum (p = 0.004)

176 than strain 2336, though not as susceptible as strain 129Pt. Therefore, the IbpA protein, but not the

177 DR1/DR2 repeats containing the Fic motifs, contributed to serum resistance. However, other

178 factors that may also be deficient in strain 129Pt appear to contribute to serum resistance in H.

179 somni.

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180

181 DISCUSSION

182 Virulent strains of H. somni are readily phagocytosed, but not killed, by neutrophils,

183 macrophages, or monocytic cells (14, 15, 20). However, the mechanism by which H. somni surives

184 within these cells is not clear. Generation of reactive oxygen intermediates are an important

185 defense mechanism that phagocytic cells use to kill bacteria following phagocytosis (21).

186 Inhibition of the oxidative burst by phagocytic cells following incubation with H. somni has been

187 well established and may contribute to intracellular survival (14, 17, 18, 22-24). Several

188 investigators have shown that this inhibition of the oxidative burst requires contact with, or the

189 presence of, viable H. somni (16, 18, 22, 24), whereas others have reported such inhibitory activity

190 can occur by killed cells or cell fractions (17, 25). The reason for this difference is unclear, but may

191 be related to differences in the assays used. Furthermore, while disease isolates of H. somni are

192 very efficient at inhibiting the oxidative burst of phagocytic cells, serum-sensitive isolates from

193 the normal bovine prepuce are not (18). In addition, incubation of phagocytic cells with H. somni

194 inhibits their subsequent uptake of opsonized S. aureus (16, 17, 22), indicating that the cells have

195 been compromised in regard to phagocytic capacity following incubation with H. somni.

196 Bovine BM cells killed strain 129Pt as effectively as BPBM, but bovine FBM-17 cells, murine

197 J774A.1, and human THP cells did not, indicating that the BM cells are well adapted to H. somni

198 or that some immortalized cell lines may be deficient in aspects of intracellular killing. Strain 2336

199 survived within BM cells as well as in BPBM, indicating this cell line was a suitable surogate for

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200 BPBM for use in these assays. In this study, additional disease and mucosal isolates were tested for

201 intracellular survival. However, while most preputial isolates were confirmed to be less capable of

202 replicating in monocytes, isolates from the healthy vagina were as capable of surviving

203 intracellularly as disease isolates. Of interest was that the isolates resistant to intracellular killing

204 are also serum-resistant (19, 26).

205 Extracellular protein toxins have not been identified in H. somni. However, high molecular

206 weight fibrillar proteins that bind IgG2 are present on the cell surface of all H. somni strains tested

207 except for some preputial isolates (19, 27, 28). This high molecular size, fribillar immunoglubulin

208 binding protein is now referred to as IbpA, and is encoded by the almost 12.3 kb ibpA gene (8).

209 Near the C-terminus of IbpA are two direct repeats containing the motif Fic, which has

210 been shown to be cytotoxic for bovine alveolar epithelial cells and phagocytic cells, and can cause

211 the cells to round up and their actin filaments disrupted, which may also inhibit phagocytosis (9).

212 Therefore, H. somni may be able to survive within phagocytic cells as a result of compromised cell

213 functions due to cytotoxic effects. Although the isolates lacking IbpA were highly susceptible to

214 killing by BM cells, a few preputial isolates that did produce IbpA (strains 24P, 124P, and 20P)

215 were also killed by BM cells, suggesting there may be factors other than IbpA that contribute to the

216 resistance of H. somni to killing by phagocytic cells. To determine if IbpA contributed to bacterial

217 survival through host cell toxicity by the Fic domain (9, 19, 20), semi-purified IbpA was added to

218 the BM cells prior to addition of strain 129Pt, which lacks IbpA and is highly susceptible to

219 intracellular killing. The addition of IbpA to BM cells did enhance the intracellular survival of

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220 strain 129Pt, and to a lesser extent other H. somni isolates lacking IbpA from the healthy prepuce,

221 and did so in a dose-dependent manner. However, the intracellular killing of 129Pt and other

222 strains was not completely abrogated, and significantly more cells of strain 129Pt were killed by

223 BM cells supplemented with IbpA than strain 2336. Therefore, IbpA may interrupt some essential

224 functions of the phagocytic cells, such as the rearrangement of actin through cytotoxicity (9), but

225 other factors appear to be required to enable H. somni to replicate intracellularly.

226 To more comprehensively examine the role of IbpA in resistance to killing by serum and

227 phagocytic cells, Tn and allelic exchange mutants were tested for intracellular survival. All ibpA

228 and other Tn mutants tested were capable of replicating in BM cells. However, all the Tn insertions

229 in the ibpA mutants were located near the 5’ end of the ibpA gene, which is responsible for

230 immunoglubulin binding through the Fc region. The N-terminus of IbpA has homology to the

231 Bordetella pertussis filamentous hemagglutinin (Fha), which contributes to adherence (10, 13),

232 and this region is also proposed to be responsible for epithelial cell adherence by H. somni (7).

233 These Tn mutants are also deficient in biofilm formation (29), for which the first stage is adherence,

234 and is therefore consisten with a role of the N-terminus in bacterial adherence. In contrast, the Fic

235 motifs are located within the DR1/DR2 repeats located near the C-terminus of the protein and were

236 still transcribed in the Tn mutants (data not shown). The Tn insertion may also have caused a frame

237 shift that created a new start codon in the middle of ibpA, which is over 12 kbp in size, or the gene

238 remained in frame enabling Fic to be transcribed.

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239 The Fic motifs within DR1/DR2 of the IbpA protein are associated with loss of actin filament

240 function, reduced phagocytosis, and cytotoxicity (7). Therefore, we sought to determine if

241 mutations in specific regions of ibpA would negate intracellular survival. Strains that normally

242 lack IbpA or a mutant lacking all of the ibpA gene are not cytotoxic (9), as they also lack the

243 cytotoxic Fic motifs within DR1/DR2 (10). However, whether cell cytotoxicity is associated with

244 intracellular survival of H. somni has not been examined. Therefore, mutants with in-frame

245 deletions in specific regions of ibpA were examined for intracellular survival as well as serum

246 resistance, which is also associated with IbpA (7). All mutants tested with deletions in specific

247 sites throughout ibpA, including DR1 and/or DR2 that include the Fic motifs, or a mutant lacking

248 the entire ibpA gene replicated in BM cells as effectively as parent strain 2336. Therefore,

249 cytotoxicity of phagocytic cells due to the Fic motifs do not explain the capability of H. somni to

250 survive within BM cells.

251 Bacterial pathogens that can survive within professional phagocytes use one or more

252 mechanisms to avoid intracellular killing, such as: 1) inhibition of phagosome-lysosome fusion

253 and acidification; 2) survival within the phago-lysosome; 3) escape from the phagosome prior to

254 lysosome fusion; 4) killing or lysing of the phagocytic cell (or phagosome or lysosome) before or

255 after phagocytosis (30, 31). We examined co-localization of H. somni with intracellular markers to

256 asses traficking of H. somni in the phagosome. All H. somni strains and mutants tested that could

257 survive or were killed within BM cells co-localized with EEA-1, which is an early endosomal

258 marker, and an early component in phagosome maturation and lysosome fusion (32). However,

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259 strain 2336 and other strains that survived within BM cells, whether expressing IbpA or not, failed

260 to acidify phagosomes and did not co-localize with LAMP-2, which is a lysosome-associated

261 membrane protein (32), and an indicator of phagosome-lysosome fusion. The addition of IbpA to

262 BM cells prior to addition of strain 129Pt did not alter acidification of the phagosome or

263 co-localization with LAMP-2, further indicating that Fic toxicity was not responsible for the

264 differences in intracellular traficking noted between strains susceptible or resistant to intracellular

265 killing. The presence of IbpA and DR1/DR2 regions has also been associated with inhibition of

266 uptake by phagocytic cells (7) most likely through disrupting the function of actin filaments (9).

267 However, in these cases either H. somni cells expressing IbpA or semi-purified IbpA were added

268 to the phagocytes, incubated for a period of time, and then bacteria (e.g. S. aureus) or

269 microparticles added. In these cases, cytotoxicity was likely responsible for reducing subsequent

270 uptake of bacteria or particles. However, there did not appear to be any significant or consistent

271 difference in the uptake of H. somni by healthy BM cells, whether the bacteria expressed IbpA or

272 not. Therefore, in addition to the effects of cytotoxicity by Fic on phagocytic cells, most H. somni

273 strains also appear to be capable of intracellular survival through inhibition of

274 phagosome-lysosome fusion.

275 H. somni is not unique among mucosal pathogens in being capable of surviving within

276 phagocytic cells. Nontypable Haemophislus influenzae is capable of surviving within human

277 THP1 monocytic cells (33), and some strains of Neisseria gonorrhoeae and N. meningitidis are

278 capable of surviving and thriving within polymorphonuclear leukocytes (34). These bacteria have

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279 not been classified as facultative intracellular pathogens because their preferred niiche within the

280 host is not normally within phagocytic cells. Therefore, the term permissive intracellular pathogen

281 may be a more appropriate term for H. somni and other typically extracellular mucosal pathogens

282 capable of surviving within professional phagocytes. Whether inhibition of the oxidative burst by

283 H. somni (18) is related to their capability to avoid maturation of the phago-lysosome or is an

284 additional mechanism of intracellular survival has yet to be determined, as does the role of

285 intracellular survival in the pathogenesis of H. somni diseases.

286 The expression of IbpA on H. somni isolates is also associated with serum resistance (26, 35),

287 as is the structure of the LOS oligosaccharide, and its modification with factors such as sialic acid

288 and phosphorylcholine (36, 37). The association of the entire IbpA protein with serum resistance

289 was confirmed in this study. The isogenic mutant lacking the entire ibpA gene was significnatly

290 more serum-sensitive than parent strain 2336 at some dilutions of antiserum. However, the lack of

291 only DR1/DR2 did not increase serum sensivitiy,but in fact made the bacteria more

292 serum-resistant. IbpA was originally identified as an immunoglubulin binding protein, and it is

293 likely that binding of host immunoglobulin through the Fc region may inhibit complement binding

294 and activation (35). Why the lack of DR1/DR2 may enhance serum reistance is unknown, but

295 could be the result of a conformational change in the protein on the cell surface that further blocks

296 complement binding and activation.

297

298 MATERIALS AND METHODS

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299 Bacterial strains. The H. somni strains and mutants used in this study are listed in Table 1.

300 Mutant 2336ΔIbpA1 has almost all of ibpA replaced with a kanamycin resistance gene (9), mutant

301 2336ΔIbpA5 has an in-frame deletion of the 3'-terminal sequence of ibpA (AC region; nucleotides

302 11725-12417 of ibpA), mutant 2336ΔIbpA7 has an in-frame deletion of the ibpA DR2 sequence

303 (nucleotides 10258-11439 of ibpA), mutant 2336ΔIbpA8 has an in-frame deletion of the ibpA DR1

304 sequence (nucleotides 8980-10185 of ibpA), mutant 2336ΔIbpA9 has an in-frame deletion of both

305 the DR1 and DR2 sequences (nucleotides 8980-11439 of ibpA), and mutant 2336ΔIbpA11 has an

306 in-frame deletion of the ibpA R1R2 sequence (nucleotides 6748-8187 of ibpA) (8, 38, 39).

307 Preputial isolate 129Pt does not produce IbpA and is not cytotoxic for epithelial cells (19).

308 However, no other differences have been identified in outer membrane proteins examined (40). All

309 strains were grown on Brain Heart Infusion (BHI) agar with 5% sheep blood in 5% CO2 overnight

310 from frozen stocks. The colonies were transferred to BHI broth supplemented with 1% yeast

311 extract, 0.1% Trizma base, and 0.01% thiamine monophosphate (TMP) (BHIY-TT) (41), and

312 shaken rapidly (~200 rpm) at 37 °C to mid-log phase.

313 Isolation of BPBM and cell lines. Peripheral blood was collected from the jugular vein of

314 Holstein cows into an EDTA-coated tube. Control experiments demonstrated that incubation of H.

315 somni strain 129Pt with each preparation of BPBM resulted in very similar killing of strain 129Pt

316 (+<5% difference). The buffy coat layer was separated from the red blood cells and plasma by

317 centrifugation at 1000 x g for 30 min at 15 °C, diluted with Hank’s Balanced Salt Solution (HBSS;

318 Life Technologies, Carlsbad, CA) and laid over Ficoll-Paque (Pharmacia, Piscataway, NJ). The

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319 BPBM were recovered following centrifugation, as per the manufacturer’s instructions. The

320 viability of the isolated BPBM was greater than 95%, as determined by trypan blue staining, and

321 were grown as confluent monolayers in RPMI-1640 medium supplemented with 10% fetal bovine

322 serum. A bovine monocytic cell line (BM) derived from blood monocytes of a 6-year-old

323 Guernsey cow was originally obtained from Dr. John Dame, University of Florida, and provided

324 by Dr. David Lindsay, Virginia Tech. The cells were grown in RPMI-1640 medium supplemented

325 with 10% heat-inactivated fetal bovine serum and 2 mM L-glutamine in 5% CO2 at 37 °C (42). The

326 cells were cultured in wells of 6-well plates at 3x105/well (in 5 ml), allowed to adhere for 24 h, and

327 the monolayers were washed 3 times with phosphate buffered saline, pH 7.2 (PBS) before adding

328 IbpA or bacteria. Other cell lines tested in the same manner were mouse J774A.1, human THP, and

329 bovine FBM-117 (43).

330 Construction of ibpA allelic exchange and transposon (Tn) mutants. Seven mutants (#9,

331 #3, #13, #91, #27, #23 and #137) with a Tn insertion within ibpA were selected from a bank of

332 mutants made with EZ::Tn5™Tnp Transposome™ (Epicentre, Chicago, IL) as

333 previously described (29). The Tn insertion site was confirmed by sequencing the ends of the Tn

334 and the flanking chromosomal region. Deletion mutant 2336ΔIbpA1 was made by replacement of

335 essentially all of the ibpA with a kanamycin resistance gene (KnR) (9). Mutants 2336ΔIbpA5,

336 2336ΔIbpA7, 2336ΔIbpA8, 2336ΔIbpA9, and 2336ΔIbpA11 were made by in-frame deletions

337 using a temperature-sensitivite (38, 39).

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338 Preparation of IbpA. The IbpA protein secreted into the culture medium was concentrated as

339 previously described with minor modifications (13). Briefly, H. somni strain 2336 was grown in

340 300 ml of BHIY-TT to mid-log phase. The bacteria were removed by centrifugation at

341 8000 × g for 10 min. The supernatant was filtered through a 0.2-μM filter to remove any residual

342 bacteria and then concentrated to 15 ml (20-fold) through a 10,000 MW centriprep centrifugation

343 filter unit (Millipore, Billerica, MA) by centrifugation at 4,000 × g for 30 min at 4°C. The

344 retentate was used as a source of concentrated IbpA in the phagocytosis assay. The purity of

345 IbpA could not be determined because the protein is very large and consists of subunits or

346 aggregates of 76, 120, 270, and 370 kDa (7). In Western blots more than 20 proteins from 76

347 kDa to 370 kDa are present in IbpA-positive strains, but none are present in IbpA-negative

348 strains, indicating this procedure results in a sample consisting of predominately IbpA (19).

349 Phagocytosis assay. Bacteria in mid-log phase were co-incubated with BPBM or BM

350 monocytic cells for 1 h at a 100:1 multiplicity of infection (bacteria:monocytes). The monocytes

351 were then incubated with 50 μg/ml of gentamicin for 30 min to kill extracellular bacteria, washed

352 three times with PBS, and incubated at 37 °C. After incubation for 0 h (1 h after addition of

353 bacteria and 30 min after addition of gentamicin), 24 h, 48 h, or 72 h the monocytes were lysed

354 with distilled water, neutralized with 2X PBS, and the lysate cultured onto BHI blood agar to

355 determine the number of viable intracellular bacteria. The uptake of H. somni by the monocytes

356 was determined at time 0, following lysis of the monocytes and inoculation to BHI blood agar. The

357 capability of IbpA to protect bacteria from intracellular killing by the monocytes was determined

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358 by co-incubation of the cells with 20-fold concentrated IbpA (3.6 mg/ml), or a sample diluted to

359 represent a 4-fold concentration, from culture supernatant for 2 h before co-incubation with the

360 bacteria.

361 Confocal Microscopy. To determine the intracellular trafficking of the bacteria in BM cells,

362 two groups of BM cells were incubated with bacteria for different time periods. In group 1 BM

363 cells were incubated with the bacteria for 30 min at 37°C, the culture medium with nonadherent

364 bacteria was removed by washing the monolayer gently three times with PBS, and the medium

365 was replaced with 3% paraformaldehyde for 10 min to fix the cells. Another group of BM cells

366 was also incubated with the bacteria as above, but after removal of the culture medium, fresh

367 medium was added and incubation was continued for 3 hr at 37°C. The BM cells were then washed

368 and fixed as above for 10 min. The cells were then permeabilized with 0.1% saponin solution

369 containing 1% bovine serum albumin (BSA) and 5% goat serum for 30 min. The intracellular H.

370 somni and phgosomal/lysosomal markers were labeled with rabbit antibodies to H. somni, or

371 EEA-1 or LAMP-2 and visualized with goat anti-rabbit antibodies conjugated with Alexa Fluor®

372 488 (H. somni) or Alexa Fluor® 546 (markers) (Life Technologies, Carlsbad, CA) by confocal

373 microscopy (Zeiss LSM 510 META; Carl Zeiss, Thornwood N.Y.). The nucleus of the monocytes

374 was visualized with DAPI (Life Technologies, Carlsbad, CA). To determine phagosome

375 acidification, the monocytes infected with H. somni were incubated with Lysotracker (Molecular

376 Probes, Eugene, OR) for 1h, following the manufacturer’s instructions. The cells were then fixed

377 as described above. To determine the percentage of H. somni co-localized with the markers, the

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378 percent of H. somni co-localized with each marker was determined from the number of H.

379 somni co-localized with either EEA-1 or LAMP-2 divided by the total number of H. somni cells.

380 The markers and intracellular H. somni were identified by SpotFinder Z and counted manually in 5

381 fields, each containing at least 4-5 monocytes (44, 45). Quantification of each marker, including

382 LysoTracker, was determined using the software imageJ (https://imagej.nih.gov/ij/download.html)

383 and MicrobeTracker (http://www.microbetracker.org/), which analyze the percentage of

384 fluorescent dots and fluorescence signals, respectively.

385 Statistical analyses. Two-tailed P values were calculated using the unpaired t test. A P value

386 <0.05 was considered significant. Statistical analyses were determined using InStat 3 software

387 (GraphPad Software, Inc., La Jolla, CA).

388

389 ACKNOWLEDGEMENTS

390 We would like to tank Dr. David Lindsay for providing the BM macrophage cell line, Dr.

391 Lynette Corbeil and Vivian Fussing for providing bacterial strains, and Poorna Goswami, Angelea

392 Sadaat, and Gillian Rodgers for excellent technical assistance. This work was supported by

393 USDA-NIFA grant 2013-67015-21314 to TJI and by HATCH funds from the Virginia-Maryland

394 College of Veterinary Medicine.

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395 REFERENCES

396 1. Sandal I, Corbeil L, Inzana T. 2010. Haemophilus, p. 387-409. In Gyles CL, Prescott

397 JF,Songer JG, Thoen CO (ed), Pathogenesis of bacterial infections in animals, 4th ed,

398 Wiley-Blackwell, Ames, IA.

399 2. Challacombe JF, Duncan AJ, Brettin TS, Bruce D, Chertkov O, Detter JC, Han CS,

400 Misra M, Richardson P, Tapia R, Thayer N, Xie G, Inzana TJ. 2007. Complete

401 sequence of Haemophilus somnus (Histophilus somni) strain 129Pt and comparison to

402 Haemophilus ducreyi 35000HP and Haemophilus influenzae Rd. J Bacteriol 189:1890-1898.

403 3. Stephens LR, Little PB, Humphrey JD, Wilkie BN, Barnum DA. 1982. of

404 cattle against experimentally induced thromboembolic meningoencephalitis with a

405 Haemophilus somnus bacterin. Am J Vet Res 43:1339-1342.

406 4. Inzana TJ. 2016. The many facets of lipooligosaccharide as a for

407 Histophilus somni. Curr Top Microbiol Immunol 396:131-148.

408 5. Behling-Kelly E, Rivera-Rivas J, Czuprynski CJ. 2016. Interactions of Histophilus somni

409 with Host Cells. Curr Top Microbiol Immunol 396:71-87.

410 6. Petruzzi B, Inzana TJ. 2016. Exopolysaccharide production and biofilm formation by

411 Histophilus somni. Curr Top Microbiol Immunol 396:149-160.

412 7. Corbeil LB. 2016. Histophilus somni surface proteins. Curr Top Microbiol Immunol

413 396:89-107.

22 bioRxiv preprint doi: https://doi.org/10.1101/322768; this version posted May 15, 2018. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission.

414 8. Tagawa Y, Sanders JD, Uchida I, Bastida-Corcuera FD, Kawashima K, Corbeil LB.

415 2005. Genetic and functional analysis of Haemophilus somnus high molecular

416 weight-immunoglobulin binding proteins. Microb Pathog 39:159-170.

417 9. Worby CA, Mattoo S, Kruger RP, Corbeil LB, Koller A, Mendez JC, Zekarias B, Lazar

418 C, Dixon JE. 2009. The fic domain: regulation of cell signaling by adenylylation. Mol Cell

419 34:93-103.

420 10. Hoshinoo K, Sasaki K, Tanaka A, Corbeil LB, Tagawa Y. 2009. Virulence attributes of

421 Histophilus somni with a deletion mutation in the ibpA gene. Microb Pathog 46:273-282.

422 11. Zekarias B, Mattoo S, Worby C, Lehmann J, Rosenbusch RF, Corbeil LB. 2010.

423 Histophilus somni IbpA DR2/Fic in virulence and immunoprotection at the natural host

424 alveolar epithelial barrier. Infect Immun 78:1850-1858.

425 12. Geertsema RS, Worby C, Kruger RP, Tagawa Y, Russo R, Herdman DS, Lo K,

426 Kimball RA, Dixon J, Corbeil LB. 2008. Protection of mice against H. somni septicemia by

427 vaccination with recombinant immunoglobulin binding protein subunits. Vaccine

428 26:4506-4512.

429 13. Geertsema RS, Zekarias B, Scheuch LL, Worby C, Russo R, Gershwin LJ, Herdman

430 DS, Lo K, Corbeil LB. 2011. IbpA DR2 subunit immunization protects calves against

431 Histophilus somni pneumonia. Vaccine 29:4805-4812.

432 14. Czuprynski CJ, Hamilton HL. 1985. Bovine neutrophils ingest but do not kill Haemophilus

433 somnus in vitro. Infect Immun 50:431-436.

23 bioRxiv preprint doi: https://doi.org/10.1101/322768; this version posted May 15, 2018. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission.

434 15. Gomis SM. 1998. Intracellular survival of Haemophilus somnus in bovine blood monocytes

435 and alveolar macrophages. Microb Pathogen 25:227-235.

436 16. Gomis SM, Godson DL, Beskorwayne T, Wobeser GA, Potter AA. 1997. Modulation of

437 phagocytic function of bovine mononuclear phagocytes by Haemophilus somnus. Microb

438 Pathog 22:13-21.

439 17. Hubbard RD, Kaeberle ML, Roth JA, Chang YW. 1986. Haemophilus somnus-induced

440 interference with bovine neutrophil functions. Vet Microbiol 12:77-85.

441 18. Howard MD, Boone JH, Buechner-Maxwell V, Schurig GG, Inzana TJ. 2004. Inhibition

442 of bovine macrophage and polymorphonuclear leukocyte superoxide anion production by

443 Haemophilus somnus. Microb Pathog 37:263-271.

444 19. Zekarias B, O'Toole D, Lehmann J, Corbeil LB. 2011. Histophilus somni IbpA Fic

445 cytotoxin is conserved in disease strains and most carrier strains from cattle, sheep and bison.

446 Vet Microbiol 149:177-185.

447 20. Lederer JA, Brown JF, Czuprynski CJ. 1987. "Haemophilus somnus", a facultative

448 intracellular pathogen of bovine mononuclear phagocytes. Infect Immun 55:381-387.

449 21. Beaman L, Beaman BL. 1984. The role of oxygen and its derivatives in microbial

450 pathogenesis and host defense. Ann Rev Microbiol 38:27-48.

451 22. Gomis SM, Godson DL, Wobeser GA, Potter AA. 1997. Effect of Haemophilus somnus on

452 nitric oxide production and chemiluminescence response of bovine blood monocytes and

453 alveolar macrophages. Microb Pathog 23:327-333.

24 bioRxiv preprint doi: https://doi.org/10.1101/322768; this version posted May 15, 2018. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission.

454 23. Pfeifer CG, Campos M, Beskorwayne T, Babiuk LA, Potter AA. 1992. Effect of

455 Haemophilus somnus on phagocytosis and hydrogen peroxide production by bovine

456 polymorphonuclear leukocytes. Microb Pathog 13:191-202.

457 24. Sample AK, Czuprynski CJ. 1991. Elimination of hydrogen peroxide by Haemophilus

458 somnus, a catalase-negative pathogen of cattle. Infect Immun 59:2239-2244.

459 25. Chiang Y-W, Kaeberle ML, Roth JA. 1986. Identification of suppressive components in

460 "Haemophilus somnus" fractions which inhibit bovine polymorphonuclear leukocyte

461 function. Infect Immun 52:792-797.

462 26. Corbeil LB, Blau K, Prieur DJ, Ward ACS. 1985. Serum susceptibility of Haemophilus

463 somnus from bovine clinical cases and carriers. J Clin Microbiol 22:192-198.

464 27. Cole SP, Guiney DG, Corbeil LB. 1992. Two linked for outer membrane proteins are

465 absent in four non-disease strains of Haemophilus somnus. Mol Microbiol 6:1895-1902.

466 28. Yarnall M, Widders PR, Corbeil LB. 1988. Isolation and characterization of Fc receptors

467 from Haemophilus somnus. Scand J Immunol 28:129-137.

468 29. Wu Y, McQuiston JH, Cox A, Pack TD, Inzana TJ. 2000. Molecular cloning and

469 mutagenesis of a DNA locus involved in lipooligosaccharide biosynthesis in Haemophilus

470 somnus. Infect Immun 68:310-319.

471 30. Inzana TJ, Balyan R, Howard MD. 2012. Decoration of Histophilus somni

472 lipooligosaccharide with N-acetyl-5-neuraminic acid enhances bacterial binding of

25 bioRxiv preprint doi: https://doi.org/10.1101/322768; this version posted May 15, 2018. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission.

473 complement factor H and resistance to killing by serum and polymorphonuclear leukocytes.

474 Vet Microbiol 161:113-121.

475 31. Sandal I, Shao JQ, Annadata S, Apicella MA, Boye M, Jensen TK, Saunders GK,

476 Inzana TJ. 2009. Histophilus somni biofilm formation in cardiopulmonary tissue of the

477 bovine host following respiratory challenge. Microbes Infect 11:254-263.

478 32. Relman DA, Falkow, S. 2015. A molecular perspective of microbial pathogenicity, p 1-10.

479 In Bennett JE, Dolin R, Blaser MJ (ed), Mandell, Douglas, and Bennett's principles and

480 practice of infectious diseases, 8th ed, vol 1. Elsevier, New York, NY.

481 33. Todar K. 2012. Todar's Online Textbook of Bacteriology

482 doi:http://textbookofbacteriology.net/antiphago.html. textbookofbacteriology.net.

483 34. Vieira OV, Botelho RJ, Grinstein S. 2002. Phagosome maturation: aging gracefully.

484 Biochem J 366:689-704.

485 35. Langereis JD, Zomer A, Stunnenberg HG, Burghout P, Hermans PW. 2013.

486 Nontypeable Haemophilus influenzae carbonic anhydrase is important for environmental and

487 intracellular survival. J Bacteriol 195:2737-2746.

488 36. Criss AK, Seifert HS. 2012. A bacterial siren song: intimate interactions between Neisseria

489 and neutrophils. Nat Rev Microbiol 10:178-190.

490 37. Widders PR, Dorrance LA, Yarnall M, Corbeil LB. 1989. Immunoglobulin-binding

491 activity among pathogenic and carrier isolates of Haemophilus somnus. Infect Immun

492 57:639-642.

26 bioRxiv preprint doi: https://doi.org/10.1101/322768; this version posted May 15, 2018. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission.

493 38. Elswaifi SF, Scarratt WK, Inzana TJ. 2012. The role of lipooligosaccharide

494 phosphorylcholine in colonization and pathogenesis of Histophilus somni in cattle. Vet Res

495 43:49.

496 39. Inzana TJ, Glindemann G, Cox AD, Wakarchuk W, Howard MD. 2002. Incorporation of

497 N-acetylneuraminic acid into Haemophilus somnus lipooligosaccharide (LOS): enhancement

498 of resistance to serum and reduction of LOS antibody binding. Infect Immun 70:4870-4879.

499 40. Hoshinoo K, Ueno Y, Ito F, Yajima R, Hiramatsu M, Tayagaki Y, Tagawa Y. 2011. A

500 mutational analysis of IbpA cytotoxicity of Histophilus somni., abstr International Union of

501 Microbiological Societies 2011 Congress, Sapporo, Japan, 6-10 September 2011. IUMS,

502 41. Hoshinoo,K., Ueno Y, Tagawa Y. 2012. Genetic analysis of inhibitory activity induced by

503 Histophilus somni immunoglobulin binding protein A on cytoskeleton formation in

504 macrophages. National Institute of Animal Health,

505 http://www.naro.affrc.go.jp/publicity_report/publication/files/118-07.pdf.

506 42. Corbeil LB, Kania SA, Gogolewski RP. 1991. Characterization of immunodominant

507 surface antigens of Haemophilus somnus. Infect Immun 59:4295-4301.

508 43. Inzana TJ, Corbeil LB. 1987. Development of a defined medium for Haemophilus somnus

509 isolated from cattle. Am J Vet Res 48:366-369.

510 44. Speer CA, Reduker DW, Burgess DE, Whitmire WM, Splitter GA. 1985.

511 Lymphokine-induced inhibition of growth of Eimeria bovis and Eimeria papillata

512 (Apicomplexa) in cultured bovine monocytes. Infect Immun 50:566-571.

27 bioRxiv preprint doi: https://doi.org/10.1101/322768; this version posted May 15, 2018. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission.

513 45. Yoshihara K, Tanaka S, Mori Y, Yokomizo Y, Onodera T, Hirota Y. 1995.

514 Establishment of a bovine macrophage cell line from a fetal thymus. J Vet Med Sci

515 57:985-988.

516 46. Guberman JM, Fay A, Dworkin J, Wingreen NS, Gitai Z. 2008. PSICIC: noise and

517 asymmetry in bacterial division revealed by computational image analysis at sub-pixel

518 resolution. PLoS Comp Biol 4:e1000233.

519 47. Delrue RM, Deschamps C, Léonard S, Nijskens C, Danese I, Schaus JM, Bonnot S,

520 Ferooz J, Tibor A, De Bolle X. 2005. A quorum‐sensing regulator controls expression of

521 both the type IV secretion system and the flagellar apparatus of Brucella melitensis. Cell

522 Microbiol 7:1151-1161.

523 48. Gogolewski RP, Schaefer DC, Wasson SK, Corbeil RR, Corbeil LB. 1989. Pulmonary

524 persistence of Haemophilus somnus in the presence of specific antibody. J Clin Microbiol

525 27:1767-1774.

526

527

528

529

530 Figure legends

531 Figure 1. Survival of H. somni strains 2336 and 129Pt in BPBM and BM monocyte cell line. The

532 bacteria were incubated with monocyte cells for 1 hr (uptake time) at 100:1 (bacteria:monocytes),

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533 gentamicin added to kill extracellular bacteria, and after 30 min the moncytes were washed,

534 incubated for 0, 24, 48, or 72 hr, lysed, and the released bacteria cultured on blood agar. □, strain

535 2336 incubated with BPBM; Δ, strain 129Pt incubated with BPBM; ◊, strain 2336 incubated with

536 BM cells; ○, strain 129Pt incubated with BM cells. Results represent the mean + standard

537 deviation of at least 3 experiments. Standard deviation bars are difficult to see due to their small

538 size and the symbols.

539 Figure 2. Survival of H. somni strains in BM monocytes after 24 h co-incubation. The strains on

540 the left of 100% were killed in the monocytes; the strains on the right of 100% replicated in the BM

541 cells. Percent survival of H. somni was determined by lysis of BM cells after 1 h (incubation time

542 given for uptake) and 24 h post co-incubation, and culture. The number of colonies recovered after

543 24 h incubation was divided by the number of colonies after 1 h of incubation x 100. Results

544 represent the mean + standard deviation of 3 experiments.

545 Figure 3. Percent intracellular survival of H. somni 129Pt after 24 h incubation in BM cells

546 preincubated for 2 hr with or without 20-fold or 4-fold concentrated, semi-purified IbpA from

547 2336 supernatant. Strain 2336 survival shown for comparison. Results represent the mean +

548 standard deviation of at least 3 experiments.

549 Figure 4. Percent survival of H.somni preputial isolates after 24 h incubation in BM cells that have

550 been preincubated for 2 h with 20-fold concentrated culture supernatant containing IbpA. Strains

551 129Pt, 1P, 133P, and 130Pf lack IbpA and were significantly more resistant to intracellular killing

29 bioRxiv preprint doi: https://doi.org/10.1101/322768; this version posted May 15, 2018. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission.

552 by BM monocytes after addition of IbpA. Strains 24P, and 124P and 20P produce IbpA and there

553 was little or no difference, respectively, in killing by BM cells following preincubation of the cells

554 with IbpA. Results represent the mean + standard deviation of at least 3 experiments.

555 Figure 5. Intracellular survival of H. somni ibpA mutants and control strains in BM cells over 72

556 hr. Survival of strain 129Pt (●); strain 2336 (■); strain 2336ΔIbpA1 (▲); strain 2336ΔIbpA9 (♦).

557 The lack of DR1/DR2 repeats containing the toxic Fic motifs or essentially the entire IbpA protein

558 had no effect on itracellular survival of strain 2336 in BM cells. Results represent the mean +

559 standard deviation of at least 3 experiments.

560 Figure 6. Confocal microscopy of H. somni strains 2336, strain 129Pt with and without addition of

561 IbpA, and 64Vc following phagocytosis. The markers EEA-1 (10 min), and LAMP-2 and

562 Lysotracker (3 hr) were stained with Alexa Fluor® 546 (red) and H. somni with Alexa Fluor® 488

563 (green). The red arrowhead point to the markers, the green arrowheads point to H. somni, the

564 yellow arrowheads point to colocalization of the markers with H. somni. Each photo shown is a

565 representative field of 6-10 fields examined from 3 separate experiments.

566 Figure 7. Quantification of H. somni serum resistant strains 2336 and 64Vc, and serum sensitive

567 strain 129Pt (with and without added IbpA) that co-localized with markers EEA-1 (white column),

568 LysoTracker (black column) or LAMP-2 (gray column). The co-localization of H. somni with each

569 marker was quantified at different time points: EEA-1 (10 min), LysoTracker/acidification and

570 LAMP-2 (3 h). Quantification of EEA-1 and LAMP-2 markers, and LysoTracker, was determined

30 bioRxiv preprint doi: https://doi.org/10.1101/322768; this version posted May 15, 2018. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission.

571 using the software imageJ and MicrobeTracker, which analyze the percentage of fluorescent dots

572 and fluorescence signals, respectively. Results represent the mean + standard deviation of at least 3

573 experiments.

574 Figure 8. Serum resistance or susceptibiilty of H. somni and ibpA mutants. Isogenic mutants of

575 control strain 2336 (●; serum resistant) lacking all of ibpA (▲; 2336ΔIbpA1) or only DR1/DR2

576 repeats containing the toxic Fic motifs (▼; 2336ΔIbpA9) were tested for susceptibility to killing

577 by antiserum to H. somni lipooligosaccharide and bovine complement in comparison to control

578 strain 129Pt (■; serum sensitive). Results represent the mean + standard deviation of at least 3

579 experiments.

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580 Table 1: H. somni trains used in this study.

581 Strain Description IbpA presenta Serum resistant Reference or source

582 2336b Isolated from bovine pneumonia strain + + (26)

583 2336::TnfhaB #3 ibpA Tn mutant + NDc (29)

584 2336::TnfhaB #13 ibpA Tn mutant + ND (29)

585 2336::TnfhaB #91 ibpA Tn mutant + ND (29)

586 2336::TnfhaB #9 ibpA Tn mutant + NDb (29)

587 2336::TnfhaB #27 ibpA Tn mutant + ND (29)

588 2336::TnfhaB #23 ibpA Tn mutant + ND (29)

589 2336::TnfhaB #137 ibpA Tn mutant + ND (29)

590 2336ΔibpA1 ibpA deletion mutant (all of ibpA) - (9)

591 2336ΔibpA5 ibpA deletion mutant (3'-terminal sequence) ND (38, 39)

592 2336ΔibpA7 ibpA deletion mutant (DR2 sequence) ND (38, 39)

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593 2336ΔibpA8 ibpA deletion mutant (DR1 sequence) ND (38, 39)

594 2336ΔibpA9 ibpA deletion mutant (DR1 andDR2 sequence;

595 all of Fic motif) + (38, 39)

596 2336ΔibpA11 ibpA deletion mutant (R1R2 sequence) ND (38, 39)

597 129Pt normal prepuce - - (26)

598 1P normal prepuce - - (26)

599 130Pf normal prepuce - - (26)

600 133P normal prepuce - - (26)

601 124P normal prepuce + - (26)

602 20P normal prepuce + + (26)

603 24P normal prepuce + - (26)

604 221V normal vagina + - (26)

605 22P normal prepuce + + (26)

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606 1225 prepuce ND ND V. Fussing, Natl. Vet.

607 Laboratry, Denmark

608 80 normal vagina + + (26)

609 1297 pneumonia + + (26)

610 5166 pneumonia ND ND (26)

611 738 phase variant of 2336

612 isolated from challenged calf lung + + (46)

613 649 abortion + + (26)

614 29Vb normal vagina + - (26)

615 318 phase variat of strain 738 + + (26)

616 8025 TME + + (26)

617 2089 abortion + + (26)

618 41Vc normal vagina + - (26)

34 bioRxiv preprint doi: https://doi.org/10.1101/322768; this version posted May 15, 2018. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission.

619 208V normal vagina + - (26)

620 202V normal vaginal + - (26)

621 570 abortion + - (26)

622 64Vc normal vagina + + (26)

623 aThe presence or absence of ibpA was determined by PCR and the production of IbpA by Western Blotting of the bacteria culture

624 supernatant (19).

625 bAll mutants were derived from strain 2336.

626 cND – not determined.

35 bioRxiv preprint doi: https://doi.org/10.1101/322768; this version posted May 15, 2018. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission.

627

628

629 Fig. 1.

630

36 bioRxiv preprint doi: https://doi.org/10.1101/322768; this version posted May 15, 2018. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission.

631

632 Fig. 2.

633

634

635

636

37 bioRxiv preprint doi: https://doi.org/10.1101/322768; this version posted May 15, 2018. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission.

637

638 Fig. 3.

639

640

641

38 bioRxiv preprint doi: https://doi.org/10.1101/322768; this version posted May 15, 2018. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission.

642

643 Fig. 4.

39 bioRxiv preprint doi: https://doi.org/10.1101/322768; this version posted May 15, 2018. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission.

644

645 Fig. 5.

40 bioRxiv preprint doi: https://doi.org/10.1101/322768; this version posted May 15, 2018. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission.

646

647 Fig. 6.

41 bioRxiv preprint doi: https://doi.org/10.1101/322768; this version posted May 15, 2018. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission.

648

649 Fig. 7.

42 bioRxiv preprint doi: https://doi.org/10.1101/322768; this version posted May 15, 2018. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission.

650

651 Fig. 8.

43