Emergence in Artificial Life
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COMPLEX SYSTEMS BIOLOGY and HEGEL's PHILOSOPHY Kazuyuki
COMPLEX SYSTEMS BIOLOGY AND HEGEL’S PHILOSOPHY Kazuyuki Ikko Takahashi KandaSurugadai 1-1, Chiyoda, Tokyo 101-8301, Meiji University ABSTRACT In this study I will argue that Hegel’s philosophy has similarity to the self- organization theories of Prigogine and Kauffman and complex systems biology of Kaneko, and is therefore an idea in advance of its times. In The Philosophy of Nature, Hegel’s interest is in how nature evolves through the mechanism of self-organization. He was writing before Darwin proposed the theory of evolution, and his dialectic is aimed at analyzing and describing development in the logical sense. The important feature of this work is their analysis of the fundamental structures by which order is generated. Hegel struggled to produce the concept of life from that of matter. He proposed that matter should develop into organism, but only in a logical sense. Nature itself is a system of producing spontaneous order through the random motion of the contingent. Then Hegel tackles living things. He would like to say that the basis of life is the non-equilibrium self-referential structure. In more modern terminology, we could interpret this as meaning that the first organism emerged from interaction between high polymers. Living creatures exhibit flexibility and plasticity through fluctuations in these elements. Complex systems biology uses a dynamical systems approach to explain how living things acquire diversity, stability and spontaneity. First, simple single-celled organisms arose through interactions between proteins and nucleic acids. These are the archae-bacteria in modern terminology. Next, the development of eukaryote cells from the prokaryotes is explained by symbiogenesis or endosymbiotic theory. -
Complex Systems Analysis of Arrested Neural Cell Differentiation During Development and Analogous Cell Cycling Models in Carcinogenesis
[04-01-2012 Preprint Update] Complex Systems Analysis of Arrested Neural Cell Differentiation during Development and Analogous Cell Cycling Models in Carcinogenesis V. I. Prisecaru and I.C. Baianu AFC-NMR & NIR Microspectroscopy Facility, College of ACES, FSHN & NPRE Departments, University of Illinois at Urbana, Urbana, IL. 61801, USA Email address: ibaianu @illinois.edu 1.Introduction A new approach to the modular, complex systems analysis of nonlinear dynamics of arrested neural cell Differentiation--induced cell proliferation during organismic development and the analogous cell cycling network transformations involved in carcinogenesis is proposed. Neural tissue arrested differentiation that induces cell proliferation during perturbed development and Carcinogenesis are complex processes that involve dynamically inter-connected biomolecules in the intercellular, membrane, cytosolic, nuclear and nucleolar compartments. Such 'dynamically inter-connected' biomolecules form numerous inter- related pathways referred to as 'molecular networks'. One such family of signaling pathways contains Nature Precedings : hdl:10101/npre.2012.7101.2 Posted 2 Apr 2012 the cell cyclins. Cyclins are proteins that link several critical pro-apoptotic and other cell cycling/division components, including the tumor suppressor gene TP53 and its product, the Thomsen-Friedenreich antigen (T antigen), Rb, mdm2, c-Myc, p21, p27, Bax, Bad and Bcl-2, which play major roles in various neoplastic transformations of many tissues. 1. Arrested Cell Differentiation in Neural -
FACETS of SYSTEMS SCIENCE SECOND EDITION International Federation for Systems Research International Series on Systems Science and Engineering
FACETS OF SYSTEMS SCIENCE SECOND EDITION International Federation for Systems Research International Series on Systems Science and Engineering Series Editor: George J. Klir State University of New York at Binghamtom Editorial Board Gerrit Broekstra Ivan M. Havel Erasmus University. Rotterdam. Charles University. Prague. The Netherlands Czech Republic John L. Casti Manfred Peschel Santa Fe Institute. New Mexico Academy of Sciences. Berlin. Germany Brian Gaines Franz Pichler University of Calgary. Canada University of Linz. Austria Volume 9 CHAOTIC LOGIC: Language. Thought. and Reality from the Perspective of Complex Systems Science Ben Goertzel Volume 10 THE FOUNDATIONS OF FUZZY CONTROL Harold W. Lewis, III Volume 11 FROM COMPLEXITY TO CREATIVITY: Explorations in Evolutionary. Autopoietic. and Cognitive Dynamics Ben Goertzel Volume 12 GENERAL SYSTEMS THEORY: A Mathematical Approach Yi Lin Volume 13 PRINCIPLES OF QUANTITATIVE LIVING SYSTEMS SCIENCE James R. Simms Volume 14 INTELLIGENT ROBOTIC SYSTEMS: Design. Planning. and Control Witold Jacak Volume 15 FACETS OF SYSTEMS SCIENCE: Second Edition George J. Klir IFSR was established "to stimulate all activities associated with the scientific study of systems and to coordinate such activities at intemationallevel." The aim of this series is to stimulate publication of high-quality monographs and textbooks on various topics of systems science and engineering. This series complements the Federation's other publications. A Continuation Order Plan is available for this series. A continuation order will bring delivery of each new volume immediately upon publication. Volumes are billed only upon actual shipment. For further information please contact the publisher. Volumes \-6 were published by Pergamon Press. FACETS OF SYSTEMS SCIENCE SECOND EDITION George J. -
Toward a New Science of Information
Data Science Journal, Volume 6, Supplement, 7 April 2007 TOWARD A NEW SCIENCE OF INFORMATION D Doucette1*, R Bichler 2, W Hofkirchner2, and C Raffl2 *1 The Science of Information Institute, 1737 Q Street, N.W. Washington, D.C. 20009, USA Email: [email protected] 2 ICT&S Center, University of Salzburg - Center for Advanced Studies and Research in Information and Communication Technologies & Society, Sigmund-Haffner-Gasse 18, 5020 Salzburg, Austria Email: [email protected], [email protected], [email protected] ABSTRACT The concept of information has become a crucial topic in several emerging scientific disciplines, as well as in organizations, in companies and in everyday life. Hence it is legitimate to speak of the so-called information society; but a scientific understanding of the Information Age has not had time to develop. Following this evolution we face the need of a new transdisciplinary understanding of information, encompassing many academic disciplines and new fields of interest. Therefore a Science of Information is required. The goal of this paper is to discuss the aims, the scope, and the tools of a Science of Information. Furthermore we describe the new Science of Information Institute (SOII), which will be established as an international and transdisciplinary organization that takes into consideration a larger perspective of information. Keywords: Information, Science of Information, Information Society, Transdisciplinarity, Science of Information Institute (SOII), Foundations of Information Science (FIS) 1 INTRODUCTION Information is emerging as a new and large prospective area of study. The notion of information has become a crucial topic in several emerging scientific disciplines such as Philosophy of Information, Quantum Information, Bioinformatics and Biosemiotics, Theory of Mind, Systems Theory, Internet Research, and many more. -
A New Transdisciplinary Paradigm for the Study of Complex Systems?", In: Self-Steering and Cognition in Complex Systems, Heylighen F., Rosseel E
Heylighen F. (1990): "A New Transdisciplinary Paradigm for the Study of Complex Systems?", in: Self-Steering and Cognition in Complex Systems, Heylighen F., Rosseel E. & Demeyere F. (ed.), (Gordon and Breach, New York), p. 1-16. A NEW TRANSDISCIPLINARY PARADIGM FOR THE STUDY OF COMPLEX SYSTEMS? Francis Heylighen Transdisciplinary Research Group Free University of Brussels ABSTRACT: two paradigms for studying the relation between autonomy and cognition are reviewed and contrasted: the "artificial" paradigm, which sees autonomous systems as linear, information-processing organizations, and the "autopoietic" paradigm, which sees them as circular, self-producing organizations. It is argued that these two paradigms are not inconsistent but complementary, and that they can be synthesized in an encompassing paradigm based on the self-organization of complex systems through variation-and-selective retention, leading to the emergence of relatively autonomous subsystems. Some implications of such an encompassing paradigm on the level of science, technology, individual persons and society are outlined, with reference to the papers in this collection. It is argued that the further development of such a transdisciplinary approach will lead to a new "science of complexity". 1. Introduction In the preface to this book it was argued that some recent trends in different disciplines seem to converge around the concepts of self-organization, autonomy and cognition. Whether these developments really announce the emergence of a new paradigm remains to be proven. Only time can tell. In this position paper, I will assume that they do, and investigate where this new paradigm would be coming from, and where it might be heading to. -
Artificial Intelligence
Intelligence, Artificial Intelligence and Wisdom in the Global Sustainable Information Society Fourth International Conference on Philosophy of Information, IS4SI Summit Berkeley 2019, UC Berkeley, 2-6 June 2019 Wolfgang Hofkirchner Director, GSIS – The Institute for a Global Sustainable Information Society, Vienna Contents 1 A complex systems view 1.1 The Great Bifurcation 1.2 The Transformation into a Global Sustainable Information Society 2 Conditions for thriving and surviving 2.1 Globality 2.2 Sustainability 2.3 Informationality 3 Intelligence, AI, and wisdom 1 A complex systems view Seen from a complex systems view, the evolution of mankind faces a Great Bifurcation. Global challenges might cause the extermination of mankind. At the same time, global challenges can be mastered through a transformation into a global sustainable information society. 1.1 The Great Bifurcation Civilisation at the breakthrough to a higher level crossroads (rise of complexity): integration of differentiated, interdependent social systems into a single meta-/suprasystem – Global Sustainable Information global space of possible Society challenges trajectories (multicrisis in all techno-, eco-, social breakdown (decline of complexity): subsystems) impossible trajectories disintegration and tipping point* falling apart of civilisation * Ervin László 1.2 Transformation Metasystem transition* agency system n interacting agency (proto-element) (network) * Francis Heylighen et al. system n+1 (proto-element) 1.2 Transformation Metasystem …organisational transition -
Systems Biology 1 Systems Biology
Systems biology 1 Systems biology Systems biology is a term used to describe a number of trends in bioscience research, and a movement which draws on those trends. Proponents describe systems biology as a biology-based inter-disciplinary study field that focuses on complex interactions in biological systems, claiming that it uses a new perspective (holism instead of reduction). Particularly from year 2000 onwards, the term is used widely in the biosciences, and in a variety of contexts. An often stated ambition of An attempted illustration of the systems approach to biology systems biology is the modeling and discovery of emergent properties, properties of a system whose theoretical description is only possible using techniques which fall under the remit of systems biology. These typically involve cell signaling networks, via long-range allostery[1]. Overview Systems biology can be considered from a number of different aspects: • As a field of study, particularly, the study of the interactions between the components of biological systems, and how these interactions give rise to the function and behavior of that system (for example, the enzymes and metabolites in a metabolic pathway).[2][3] • As a paradigm, usually defined in antithesis to the so-called reductionist paradigm (biological organisation), although fully consistent with the scientific method. The distinction between the two paradigms is referred to in these quotations: "The reductionist approach has successfully identified most of the components and many of the interactions but, unfortunately, offers no convincing concepts or methods to understand how system properties emerge...the pluralism of causes and effects in biological networks is better addressed by observing, through quantitative measures, multiple components simultaneously and by rigorous data integration with mathematical models" Sauer et al[4] "Systems biology...is about putting together rather than taking apart, integration rather than reduction. -
Arxiv:Nlin/0610040V2 [Nlin.AO] 27 Nov 2012
Self-organizing Traffic Lights: A Realistic Simulation Seung-Bae Cools, Carlos Gershenson, and Bart D’Hooghe 1 Introduction: Catch the Green Wave? Better Make Your Own! Everybody in populated areas suffers from traffic congestion problems. To deal with them, different methods have been developed to mediate between road users as best as possible. Traffic lights are not the only pieces in this puzzle, but they are an important one. As such, different approaches have been used trying to reduce waiting times of users and to prevent traffic jams. The most common consists of finding the appropriate phases and periods of traffic lights to quantitatively optimize traffic flow. This results in “green waves” that flow through the main avenues of a city, ideally enabling cars to drive through them without facing a red light, as the speed of the green wave matches the desired cruise speed for the avenue. However, this approach does not consider the current state of the traffic. If there is a high traffic density, cars entering a green wave will be stopped by cars ahead of them or cars that turned into the avenue, and once a car misses the green wave, it will have to wait the whole duration of the red light to enter the next green wave. On the other hand, for very low densities, cars might arrive too quickly at the next intersection, having to stop at each crossing. This method is certainly better than having no synchronization at all, however, it can be greatly improved. Traffic modelling has enhanced greatly our understanding of this complex phe- nomenon, especially during the last decade (Prigogine and Herman 1971; Wolf et al. -
Print Special Issue Flyer
IMPACT FACTOR 2.524 an Open Access Journal by MDPI What Is Self-Organization? Guest Editors: Message from the Guest Editors Prof. Dr. Claudius Gros In this Special Issue, we invite viewpoints, perspectives, Institute for Theoretical Physics, and applied considerations on questions regarding the Goethe University notions of self-organization and complexity. Examples Frankfurt/Main, Frankfurt, Germany include: [email protected] Routes: In how many different ways can self-organization manifest itself? Would it be meaningful, or even possible, to Dr. Damián H. Zanette Centro Atómico Bariloche, 8400 attempt a classification? Bariloche, Río Negro, Argentina Detection: Can we detect it automatically—either the [email protected] process or the outcome? Or do we need a human observer Dr. Carlos Gershenson to classify a system as “self-organizing”? This issue may be Computer Science Department, related to the construction of quantifiers, e.g., in terms of Instituto de Investigaciones en functions on phase space, such as entropy measures. Matemáticas Aplicadas y en Sistemas, Universidad Nacional Complexity: Is a system self-organizing only when the Autónoma de México, A.P. 20- resulting dynamical state is “complex”? What does 726, México 01000, D.F., Mexico “complex” mean exact;ly? Are there many types of [email protected] complexity, or just a single one? E.g., it has never been settled whether complexity should be intensive or extensive, if any. Deadline for manuscript submissions: Domains: Where do we find self-organizing processes? Are 15 October 2021 the properties of self-organizing systems domain-specific or universal? In which class of systems does self- organization show up most clearly? mdpi.com/si/77921 SpeciaIslsue IMPACT FACTOR 2.524 an Open Access Journal by MDPI Editor-in-Chief Message from the Editor-in-Chief Prof. -
Towards a Cybernetic Foundation for Natural Resource Governance
Towards a Cybernetic Foundation for Natural Resource Governance A Thesis Presented to the Academic Faculty by Talha Manzoor In Partial Fullfilment of the Requirements for the Degree of Doctor of Philosophy in Electrical Engineering Supervisor: Abubakr Muhammad (LUMS) Co-supervisor: Elena Rovenskaya (IIASA) arXiv:1803.09369v1 [cs.SY] 20 Mar 2018 Syed Babar Ali School of Science and Engineering Lahore University of Management Sciences December 2017 © 2017 by Talha Manzoor To Marwa and her never-ending quest for adventure. Abstract This study explores the potential of the cybernetic method of inquiry for the problem of natural resource governance. The systems way of thinking has already enabled scientists to gain considerable headway in framing global environmental challenges. On the other hand, technical solutions to environmental problems have begun to show significant promise, driven by the advent of technology and its increased proliferation in coupled human and natural systems. Such settings lie on the interface of engineering, social and environmental sciences, and as such, require a common language in order for natural resources to be studied, managed and ultimately sustained. In this dissertation, we argue that the systems theoretic tradition of cybernetics may provide the necessary common ground for examining such systems. After discussing the relevance of the cybernetic approach to natural resource governance, we present a mathematical model of resource consumption, grounded in social psychological research on consumer behavior. We also provide interpretations of the model at various levels of abstraction in the social network of the consuming population. We demonstrate the potential of the model by examining it in various theoretic frameworks which include dynamical systems, optimal control theory, game theory and the theory of learning in games. -
Purity Lost: the Ap Radoxical Face of the New Transnational Legal Body Oren Perez
Brooklyn Journal of International Law Volume 33 | Issue 1 Article 1 2007 Purity Lost: The aP radoxical Face of the New Transnational Legal Body Oren Perez Follow this and additional works at: https://brooklynworks.brooklaw.edu/bjil Recommended Citation Oren Perez, Purity Lost: The Paradoxical Face of the New Transnational Legal Body, 33 Brook. J. Int'l L. (2007). Available at: https://brooklynworks.brooklaw.edu/bjil/vol33/iss1/1 This Article is brought to you for free and open access by the Law Journals at BrooklynWorks. It has been accepted for inclusion in Brooklyn Journal of International Law by an authorized editor of BrooklynWorks. PURITY LOST: THE PARADOXICAL FACE OF THE NEW TRANSNATIONAL LEGAL BODY Oren Perez* INTRODUCTION ................................................................................ 3 I. PURITY: THE WESTPHALIAN NARRATIVE ..................................... 5 II. PARADOXES AND INCONSISTENCIES IN THE CURRENT INVOCATIONS OF THE WESTPHALIAN NARRATIVE ........................... 7 A. Detour: Paradoxes and Inconsistencies in the Law............... 7 1. Paradoxes: A General Exposition ....................................... 7 2. Paradoxes in Law: Incoherence and Paralysis.................. 10 B. Paradoxes in the Westphalian Order: The Cases of the WTO and the ICC............................................................................... 17 1. The Case of the WTO ....................................................... 17 2. The International Criminal Court...................................... 19 III. ALTERNATIVE -
Envisaging a Comprehensible Global Brain As a Playful Organ
Alternative view of segmented documents via Kairos 2 December 2019 | Draft Envisaging a Comprehensible Global Brain -- as a Playful Organ Patterns connecting the dots between hemispheres, epicycles and quavers - / - Introduction Patterning and framing a global brain? Systemic feedback cycles of global brain interrelationships in 2D Various representations of cyclic dynamics with implications for a global brain Implication of 3D representation of a global brain Dynamic patterns of play engendered by Homo ludens and Homo undulans? Requisite helical cognitive engagement within a global brain Brainwaves and feedback loops in a global brain? Pathology of the global brain? Global brain as an organ: playable, playful or neither? References Introduction Collectively distributed cognition: This exploration is partly inspired by the work of Stafford Beer, as a management cybernetician, into the design of an appropriate collective brain (Brain of the Firm: the managerial cybernetics of organization, 1981), especially given the requisite complexity for a "viable system" (Giuliana Galli Carminati, The Planetary Brain: From the Web to the Grid and Beyond, 2011). Use of the metaphor followed from the influential study by an earlier cybernetician, W. Ross Ashby (Design for a Brain: the origin of adaptive behavior, 1952). The design preoccupation was the primary feature of a presentation by Shann Turnbull (Design Criteria for a Global Brain, 2001) as presented to the First Global Brain Workshop (Brussels, 2001). The argument follows from the controversial assertion recently made by President Macron of France with respect to the "brain death" of NATO and the potential implications for any "global brain" (Are the UN and the International Community both Brain Dead -- given criteria recognizing that NATO is brain dead? 2019).