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Chemistry: The Molecular Science Moore, Stanitski and Jurs “The study of speeds of reactions and the nanoscale pathways or rearrangements by which atoms and molecules are transformed to products”

Chapter 13: Chemical Kinetics: Rates of Reactions Chemical kinetics is also called reaction kinetics or kinetics.

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Reaction Rate

Factors affecting the speed of a reaction: of Fe(s) powder: • Properties of reactants and products  especially their structure and bonding. • of reactants (and products). • • Catalysts  and if present, their .

Reactions are either: Homogeneous - reactants & products in one phase. Heterogeneous - species in multiple phases.

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Reaction Rate Reaction Rate

+ Change in [reactant] or [] per unit time. Average rate of the Cv reaction can be calculated: Time, t [Cv+] Average rate + Cresol violet (Cv ; a dye) decomposes in NaOH(aq): -1 -1 (s) (mol / L) (mol L s ) Sample calculation 0.0 5.000 x 10-5 Avg. rate = [Cv+] 13.2 x 10-7 t 10.0 3.680 x 10-5 9.70 x 10-7 = (5.00x10-5 – 3.68x10-5) mol/L 20.0 2.710 x 10-5 (10.0 – 0.0) s 7.20 x 10-7 30.0 1.990 x 10-5 5.30 x 10-7 = -1.32 x 10-6 mol L-1min-1 40.0 1.460 x 10-5 3.82 x 10-7 + - → 50.0 1.078 x 10-5 Table shows positive rates Cv (aq) + OH (aq) CvOH(aq) 2.85 x 10-7 60.0 0.793 x 10-5 – explained soon… 1.82 x 10-7 change in concentration of Cv+  [Cv+ ] 80.0 0.429 x 10-5 rate = = 0.99 x 10-7 elapsed time t 100.0 0.232 x 10-5

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1 Reaction Rates and Reaction Rates and Stoichiometry Cv+(aq) + OH-(aq) → CvOH(aq) For any general reaction: a A + b B c C + d D Stoichiometry: The overall rate of reaction is: Loss of 1 Cv+  Gain of 1 CvOH Rate of Cv+ loss = Rate of CvOH gain 1 [A] 1 [B] 1 [C] 1 [D] Rate = =  =+ = + Another example: a t b t c t d t

2 N2O5(g) 4 NO2(g) + O2(g) Loss of 2 N O  Gain of 1 O 2 5 2 Reactants decrease with time. Products increase with time. Negative sign. Rate of N2O5 loss = 2 x (rate of O2 gain) Positive sign

Negative rate Positive rate

Rate of loss of N2O5 divided by -2, equals rate of gain of O2

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Reaction Rates and Stoichiometry Average Rate and Instantaneous Rate For: Graphical view of Cv+ reaction: 5.0E-5 H2 (g) + I2 (g)  2 HI (g) -1 -1 the rate of loss of I2 is 0.0040 mol L s . What is 4.0E-5 the rate of formation of HI ? 3.0E-5

[H ] [I ] 1 [HI] ] (mol/L) Rate = 2 =  2 = + + 2.0E-5

t t 2 t [Cv 1.0E-5

[H2] 1 [HI] Rate =  =  (-0.0040) = + 0 t 2 t 0 20 40 60 80 100 t (s) [HI] So = +0.0080 mol L-1 s-1 Average rate (from 0 to 80 s) = slope of the blue triangle t …but the avg. rate depends on interval chosen.

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Average Rate and Instantaneous Rate Effect of Concentration on Reaction Rate Rate may change when [reactant] changes. •Cv+ example shows this. •For Cv+ the rate is proportional to concentration.

t [Cv+] Rate of Cv+ Rate/[Cv+] (s) (M) loss (M / s) (s-1)

0 5.00 x 10-5 1.54 x 10-6 0.0308 80 4.29 x 10-6 1.32 x 10-7 0.0308

Instantaneous rate = slope of a line tangent to the curve. rate = k [Cv+] • t = 0 s and t = 80 s have different instantaneous rates

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2 Rate Law and Order of Reaction Determining Rate Laws from Initial Rates A general reaction will usually have a rate law: Rate laws must be measured. rate = k [A]m [B]n . . . They cannot be predicted from reaction stoichiometry.

Initial Rate Method where To find the order for a reactant: k rate constant • Run the experiment with known [reactant]0. m, n order for A & B, respectively • Measure the initial rate of reaction (slope at t = 0). m + n + … overall order of the reaction • Change [reactant]0 of 1 reactant; keep all others constant. • Remeasure the initial rate. The orders are usually integers (-2, -1, 0, 1, 2…), • The ratio of the two rates gives the order for the chosen but may also be fractions (, …) reactant.

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Determining Rate Laws from Initial Rates Determining Rate Laws from Initial Rates

Initial concentration (M) Data for the reaction of methyl acetate with base: - Expt. [CH3COOCH3][OH] Initial rate (M/s) 1 0.040 0.040 2.2 x 10-4 - - -4 CH3COOCH3 + OH CH3COO + CH3OH 2 0.040 0.080 4.5 x 10 3 0.080 0.080 9.0 x 10-4

Initial concentration (M) Dividing the first two data sets:

- -4 m n Expt. [CH3COOCH3][OH ] Initial rate (M/s) 4.5 x 10 M/s = k (0.040 M) (0.080 M) 1 0.040 0.040 2.2 x 10-4 2.2 x 10-4 M/s = k (0.040 M)m(0.040 M)n 2 0.040 0.080 4.5 x 10-4 m n 3 0.080 0.080 9.0 x 10-4 Thus: 2.05 = (1) (2.00) n 2.05 = (2.00) 1 raised to any Rate law: and n = 1 power = 1 rate = k [CH COOCH ]m [OH-]n 3 3 It is 1st order with respect to OH-.

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Determining Rate Laws from Initial Rates Determining Rate Laws from Initial Rates

Use experiments 2 & 3 to find m: The rate law is: - rate = k [CH3COOCH3][OH ] 9.0 x 10-4 M/s = k (0.080 M)m(0.080 M)n 4.5 x 10-4 M/s = k (0.040 M)m(0.080 M)n Overall order for the reaction is: m + n = 1 + 1 = 2 So: 2.00 = (2.00)m (1)n 2.00 = (2.00)m The reaction is: 2nd order overall. and m = 1 1st order in OH- st 1 order in CH3COOCH3 st Also 1 order with respect to CH3COOCH3.

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3 Determining Rate Laws from Initial Rates The Integrated Rate Law If a rate law is known, k can be determined: Calculus is used to integrate a rate law. st rate Consider a 1 -order reaction: A products k = [CH COOCH ][OH-] [A] 3 3 rate = – = k [A] t 2.2 x 10-4 M/s Using run 1: k = d [A] (0.040 M)(0.040 M) = – = k [A] (as a differential equation) dt

-1 -1 -1 -1 k = 0.1375 M s = 0.1375 L mol s Integrates to: ln [A]t = k t + ln [A]0 y = m x + b (straight line) Could repeat for each run, take an average… If a reaction is 1st-order, a plot of ln [A] vs. t will be But a graphical method is better. linear.

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The Integrated Rate Law Zeroth-order reaction The Integrated Rate Law slope = - Rate data for the decomposition of cyclopentene The reaction: k A products [A] C H (g) → C H (g) + H (g) doesn’t have to be 1st order. 5 8 5 6 2 time t were measured at 850°C. Determine the order of the Some common integrated rate laws: First-order reaction reaction from the following plots of those data: slope = -

Order Rate law Integrated rate law Slope k time t ln[A]

0 rate = k [A]t = -kt + [A]0 -k 1 rate = k[A] ln[A] = -kt + ln[A] -k t 0 Second-order reaction 2 1 1 2 rate = k[A] = kt + +k k [A]t [A]0 slope = 1/[A]

y x time t • The reaction is first order (the only linear plot) • k = -1 x (slope) of this plot. The most accurate k is obtained from the slope of a plot.

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Half-Life Half-Life For a 1st-order reaction: t1/2 = Time for [reactant]0 to fall to [reactant]0. ln[A]t = -kt + ln[A]0

st Half-lives are only useful for 1 -order reactions. When t = t1/2 [A]t = [A]0 Why?

Then: ln([A]0) = -kt1/2 + ln[A]0 • t is independent of the starting concentration. 1/2 ln([A] /[A] ) = -kt {note: ln x – ln y = ln(x/y)}  only true for 1st order reactions (not 0th, 2nd…) 0 0 1/2 ln() = -ln(2) = -kt1/2 {note: ln(1/y) = –ln y } st • t1/2 is constant for a given 1 -order reaction. t =ln 2 = 0.693 1/2 k k

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4 Half Life Calculating [ ] or t from a Rate Law

st t1/2 of a 1 -order reaction can be used to find k. Use an integrated . For cisplatin (a chemotherapy agent): •  the cisplatin lost after 475 min. Example → • (0.0100 M 0.0050 M) In a 1st-order reaction, [reactant] = 0.500 mol/L and 0.010 • [cisplatin] halves every 475 min 0 t1/2 = 400.s. Calculate: 0.008 k =ln 2 = 0.693 a) [reactant],1600.s after initiation. 0.006 t 475 min 1/2 b) t for [reactant] to drop to 1/16th of its initial value. -3 -1 0.004 = 1.46 x 10 min c) t for [reactant] to drop to 0.0500 mol/L.

[cisplatin] (mol/L) 0.002

0 0 400 800 1200 1600 2000 t (min)

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Calculating [ ] or t from a Rate Law Calculating [ ] or t from a Rate Law

st st In a 1 -order reaction, [reactant]0 = 0.500 mol/L and t1/2 = 400.s In a 1 -order reaction, [reactant]0 = 0.500 mol/L and t1/2 = 400.s (a) Calculate [reactant] ,1600.s after initiation. (b) Calculate t for [reactant] to drop to 1/16th of its initial value.

st 1 order: [reactant] 1 [reactant] t 0 2 0 1/2 -3 -1 k = ln 2/ t = 0.6931/(400. s) = 1.733x10 s 1 1  [reactant]0 [reactant]0 t1/2 2 4 and ln [A]t = -kt + ln [A]0 1 1 4 [reactant]0 8 [reactant]0 t1/2 so ln[A] = -(0.001733 s-1)(1600 s) +ln(0.500) t 1 [reactant] 1 [reactant] t 8 0 16 0 1/2 ln[A]t = -2.773 + -0.693 = -3.466 4 t1/2 = 4 (400 s) = 1600 s -3.466 [A]t = e = 0.0312 mol/L Note: part (a) could be solved in a similar way. 1600 s = 4 t1/2 so 0.500  0.250  0.125  0.0625  0.0313 M.

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Calculating [ ] or t from a Rate Law Nanoscale View: Elementary Reactions

st In a 1 -order reaction, [reactant]0 = 0.500 mol/L and t1/2 = 400.s Individual molecules undergo: (c) Calculate t for [reactant] to drop to 0.0500 mol/L ? • unimolecular reactions – a single particle (atom, ion, molecule) rearranges into 1 or 2 different particles. From part (a): k = 1.733 x 10-3 s-1 • bimolecular reactions – two particles collide and rearrange. ln [A] = -kt + ln [A] t 0 Both are elementary reactions – what actually then ln (0.0500) = -(0.001733 s-1) t + ln(0.500) occurs at the nanoscale. -2.996 = -(0.001733 s-1) t – 0.693 Observed reactions (macroscale) may be: t = -2.303 • elementary – directly occur by one of these two processes, -0.001733 s-1 or • complex – occur as a series of elementary steps. t = 1.33 x 103 s

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5 Elementary reactions Unimolecular Reactions Example 2-butene isomerization is unimolecular: Label these elementary reactions as unimolecular or

bimolecular: H3C CH3 H3C H unimolecular C=C (g) C=C (g) H H H CH3 bimolecular cis-2-butene trans-2-butene

unimolecular

unimolecular

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Unimolecular Reactions transition state or activated complex During isomerization, 2-butene passes through a )

J 500 transition state or activated complex. -21 Ea is the activation 400 energy, the minimum E

J • Occurs at the top of the activation barrier

300 -21 to go over the barrier. • Exists for very short time (few fs, 1 fs = 10-15 s). 200 = 435 x 10 100 a • Falls apart to form products or reactants. E

0 -21 • If an exothermic reaction Potential energy (10 Potential E = -7 x 10 J Initial state Final state  products are at lower E than the reactants -30° 0 30° 60° 90° 120° 150° 180° 210° Reaction Progress (angle of twist) Exothermic overall  the reverse reaction will be slower. cis-trans conversion twists the C=C bond. -19 • This requires a lot of energy (Ea= 4.35x10 J/molecule = 262 kJ/mol) • Even more (4.42x10-19J/molecule) to convert back.

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Bimolecular Reactions Bimolecular Reactions e.g. Iodide ions reacting with methyl bromide:

- - I (aq) + CH3Br(aq) ICH3(aq) + Br (aq) I- must collide in the right location to cause the inversion. transition state

I- must collide with enough E and in the right location to cause the inversion. • unless the I- “hits” as shown it cannot drive out the Br- • only a small fraction of the collisions have this orientation. • the fractional factor is called the steric factor

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6 Bimolecular Reactions Temperature and Reaction Rate

Increasing T will speed up most reactions. )

J 150 transition state -21 120 Higher T = higher average Ek for the reactants.

90 J -21 = larger fraction of the molecules can

60 Products overcome the activation barrier. (final state)

30 = 126 x 10 a E = 63 x 10-21 J E 25°C 0 Potential energy (10 Potential Reactants (initial state) 75°C Many more molecules have Reaction Progress (changing bond lengths and angles) E enough E to react at 75°C, • Also has an activation barrier (E ). a a so the reaction goes much

• Forward and back Ea are different. of moleculesnumber faster. • Here the forward reaction is endothermic. kinetic energy

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Temperature and Reaction Rate Temperature and Reaction Rate

Reaction rates are strongly T-dependent. Data for The shows how k varies with T - the I + CH3Br reaction: -E / RT k = A e a T (K) k (L mol-1 K-1)

) -5

-1 273 4.18 x 10

K -4 Quantity Name Interpretation and/or comments

-1 290 2.00 x 10 A Frequency factor How often a collision occurs with -3 310 2.31 x 10 the correct orientation. -2

(L mol (L 330 1.39 x 10

k Ea Barrier height. 350 6.80 x 10-2 e-Ea/RT Fraction of the molecules with 370 2.81 x 10-1 enough E to cross the barrier. T Temperature Must be in kelvins. 0.00 0.10 0.20 0.30 0.20 0.10 0.00 250 300 350 400 R Gas law constant 8.314 J K-1 mol-1. T (K)

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Determining Activation Energy Determining Activation Energy Take the natural logarithms of both sides: The iodide-methyl bromide reaction data:

-Ea / RT 28 Ea = -(slope) x R ln k = ln A e intercept = 23.85 ln ab = ln a + ln b 8.314 J -Ea / RT 18 = -(-9.29 x103 K) ln k = ln A + ln e slope = -9.29 x 10 K mol ln e = 1 3

k = 77.2 x 10 J/mol Ea 8

ln k = ln A +  ln e ln RT 3 = 77.2 kJ/mol K -2

Ea 1 ln k =  + ln A A = eintercept = e23.85 R T -12 0 0.001 0.002 0.003 0.004 A = 2.28 x 1010 L mol-1 s-1 1/T (K-1) (A has the same units as k) A plot of ln k vs. 1/T is linear (slope = Ea/R).

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7 Rate Laws for Elementary Reactions Reaction Mechanisms A complex reaction example: Elementary reactions Occur as written and their rate laws are predictable. 2 I-(aq) + H O (aq) + 2 H O+(aq)  I (aq) + 4 H O(l) • Unimolecular reactions are always 1st -order. 2 2 3 2 2

• Bimolecular reactions are always 2nd-order. + -3 -5 When [H3O ] is between 10 M and 10 M, - rate = k [I ][H2O2]

Complex reactions It must be complex • Do not occur as written. • Exponents in the rate law do not match the stoichiometry. • They are carried out in a series of elementary steps. • Five reactants do not collide, form a transition state, and break into I2 and 4H2O.

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Reaction Mechanisms Reaction Mechanisms

A • lists the series of elementary steps that occur. • shows how reactants change into products.

- + 2 I (aq) + H2O2(aq) + 2 H3O (aq) I2 (aq) + 4 H2O(l)

Mechanism HOOH + I- slow OH- + HOI Shows the bonding in H O 2 2 - fast - HOI + I OH + I2

- + fast 2{ OH + H3O 2 H2O } - + overall 2 I + H2O2 + 2 H3O I2 + 4 H2O

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Reaction Mechanisms Reaction Mechanisms Rate-limiting step Step one HOOH + I- OH- + HOI • The slowest step in the sequence Slow. It determines the overall rate. • Overall reaction rate is limited by, and equal to, the rate of the slowest step. - - Steps 2 & 3 HOI + I OH + I2 A good analogy is supermarket shopping: - + 2{ OH + H3O 2 H2O } • You run in for 1 item (~1 min = fast step), but… Fast. Will not affect the rate. • The checkout line is long (~10 min = slow step). • Time spent is dominated by the checkout-line wait. The overall rate is expected to be • In a reaction, a slow step may be thousands or - rate = k [H2O2][ I ] as observed! even millions of times slower than a fast step.

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8 Mechanisms with a Fast Initial Step Mechanisms with a Fast Initial Step Consider: Step 2 is rate limiting: rate = k2 [NOBr2] [NO] 2 NO (g) + Br2 (g) 2 NOBr (g)

But NOBr2 is an intermediate. It is difficult (sometimes impossible) to measure its concentration. The generally accepted reaction mechanism is:

NOBr2 can form and fall apart many times (step 1) Step one NO + Br2 NOBr2 fast before it converts to products.

Step two NOBr2 + NO 2 NOBr slow Step1 is reversible (double arrows).

2 NO + Br2 2 NOBr NO + Br2 NOBr2 fast, reversible

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Mechanisms with a Fast Initial Step Mechanisms with a Fast Initial Step

Equilibrium is established. The earlier rate law:

k 1 rate = k2 [NOBr2] [NO] NO + Br2 NOBr2 reversible, equilibrium k-1 becomes: k1[NO][Br2] rate = k2 [NO] At equilibrium: k-1 rate forward = rate back k1k2 2 rate = [Br2][NO] k-1 k1[NO][Br2] = k-1[NOBr2] 2 rate = k' [Br2][NO] k [NO][Br ] [NOBr ] = 1 2 Now only contains starting materials - can be 2 k -1 checked against experiment.

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Summary Catalysts and Reaction Rate Elementary reactions: the rate law can be written down from the stoichiometry. A Catalyst is a substance that: unimolecular rate = k[A] • increases reaction rate without being consumed bimolecular rate = k[A]2 or rate = k[A][B] (reactants are consumed). • You can’t work backwards: • changes the mechanism for the reaction.  Rate law matches stoichiometry: the reaction may be elementary or complex. • provides a lower Ea in the rate limiting step. • The reaction must be complex if:  rate law doesn’t match the stoichiometry A catalyst does not change the products or their  a species has a non-integer order. relative proportions.  the overall order is greater than 2.

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9 Catalysts and Reaction Rate Catalysts and Reaction Rate I is not in the overall equation, and is not used up. 2-butene isomerization is catalyzed by a trace of I2. 2 The mechanism changes! H C CH H C H 3 3 3 I2 splits into 2 atoms. C=C (g) C=C (g) Each has an unpaired Mechanism: e-. (shown by the dot) H H H CH 3 step 1: {I 2 I•} No catalyst: 2 rate = k [cis-2-butene] I• attaches and breaks one C-C bond A trace of I (g) speeds up the reaction, and: H C 2 H C CH3 3 CH3 rate = k [ I ] [cis-2-butene] 3 • 2 step 2: I• + C=C I C–C k  uncatalyzed k H H H H

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Catalysts and Reaction Rate Catalysts and Reaction Rate

Rotation around C-C Transition state for the H C uncatalyzed reaction 3 CH3 H3C H • step 3: I C–C C–C I Rotation around C-C • I• leaves; double bond H CH3 H H reforms I2 dissociates E = 262 kJ/mol H C a 3 H H3C H to I• + I• I• + I• regenerates I step 4: I C–C C=C + I• 2 • Reactants (initial state) Ea = 115 kJ/mol Products CH3 H CH3 H E = -4 kJ/mol (final state) Loss of I• and formation of C=C Reaction Progress I• adds to cis-2-butene, (double  single bond) step 5:  {2 I• I2} I2 is regenerated

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Catalysts and Reaction Rate : Biological Catalysts Key points: Enzymes are:

•I2 dissociates and reforms. • Usually very large proteins (often globular proteins)  Not consumed, not in the overall reaction equation. • Very efficient catalysts for 1 or more chemical reactions • The activation energy is much lower. • can increase rates by factors of 109 - 1019  115 kJ/mol vs. 262 kJ/mol • can catalyze millions of reactions per minute.  The catalyzed reaction is 1015 times faster at 500 K. • Highly specific • 5 step mechanism = 5 humps in energy diagram. • react with 1 or a small number of substrates (the molecule • Catalyst and reactant are both in the same phase. undergoing the reaction).  Homogeneous • May require a cofactor to be present before they work • The initial and final energies are identical • Small organic or inorganic molecule or ion. • Many use NAD+ (nicotinamide adenine dinucleotide ion)  H is the same whether catalyzed or not!

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10 Activity and Specificity Enzyme Activity and Specificity

Enzymes are often large globular proteins, but only a small part (the ) interacts with the substrate.

The induced fit stretches and bends the substrate (and active site).

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Enzyme Activity and Specificity

Enzymes are effective catalysts because they: Transition state for the • Bring and hold substrates together while a reaction occurs. Formation of the uncatalyzed reaction enzyme-substrate • Hold substrates in the shape that is most effective for complex reaction. Transformation of Potential energy, the substrate to • Can donate or accept H+ from the substrate (act as acid or Ea products

base) Activation energy E'a is much smaller than E E' a • Stretch and bend substrate bonds in the induced fit so the a and so the enzyme reaction starts partway up the activation-energy hill. makes the reaction E Reactants E much faster (initial state) Products (final state) Reaction Progress

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Enzyme Activity and Specificity Catalysis in Industry Enzyme catalyzed reactions: Catalysts are used extensively in industry. • have unusual T dependence. • Many are heterogeneous catalysts  speed up as T increases…  usually a solid catalyst with gas or liquid reactants &  but will denature (change gross products. shape) and stop working.  acetic acid is prepared using solid rhodium(III) iodide:

RhI3 • have a maximum reaction rate. CH3OH(l) + CO(g) CH3COOH(l)  [enzyme] limiting.  auto exhausts are cleaned by catalytic converters: • can be blocked by an inhibitor 2 CO(g) + O (g)Pt-NiO 2 CO  binds, but doesn’t react and 2 2 Pt-NiO release. 2 C8H18(g) + 25 O2 16 CO2(g) + 18 H2O(g) catalyst 2 NO(g) N2(g) + O2(g)

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11 Controlling Automobile Emissions Converting to Liquid Fuel Methane is hard to transport. It can be converted …forms a bond with the Pt surface… to methanol:

…dissociates into N and O atoms (each CH4(g) +  O2(g)  CO(g) + 2 H2(g) bonded to Pt)… NO approaches the Pt surface… …N and O migrate on the surface until they get close to CO(g) + 2 H2(g)  CH3OH(l) like atoms… A Pt-coated ceramic catalyst allows the 1st reaction to occur at low T. …they form N2 and O2 and leave the surface.

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