Algal Diversity of Temperate Biological Soil Crusts Depends on Land Use Intensity and Affects Phosphorus Biogeochemical Cycling
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Induction of Conjugation and Zygospore Cell Wall Characteristics
plants Article Induction of Conjugation and Zygospore Cell Wall Characteristics in the Alpine Spirogyra mirabilis (Zygnematophyceae, Charophyta): Advantage under Climate Change Scenarios? Charlotte Permann 1 , Klaus Herburger 2 , Martin Felhofer 3 , Notburga Gierlinger 3 , Louise A. Lewis 4 and Andreas Holzinger 1,* 1 Department of Botany, Functional Plant Biology, University of Innsbruck, 6020 Innsbruck, Austria; [email protected] 2 Section for Plant Glycobiology, Department of Plant and Environmental Sciences, University of Copenhagen, 1871 Frederiksberg, Denmark; [email protected] 3 Department of Nanobiotechnology, University of Natural Resources and Life Sciences Vienna (BOKU), 1190 Vienna, Austria; [email protected] (M.F.); [email protected] (N.G.) 4 Department of Ecology and Evolutionary Biology, University of Conneticut, Storrs, CT 06269-3043, USA; [email protected] * Correspondence: [email protected] Abstract: Extreme environments, such as alpine habitats at high elevation, are increasingly exposed to man-made climate change. Zygnematophyceae thriving in these regions possess a special means Citation: Permann, C.; Herburger, K.; of sexual reproduction, termed conjugation, leading to the formation of resistant zygospores. A field Felhofer, M.; Gierlinger, N.; Lewis, sample of Spirogyra with numerous conjugating stages was isolated and characterized by molec- L.A.; Holzinger, A. Induction of ular phylogeny. We successfully induced sexual reproduction under laboratory conditions by a Conjugation and Zygospore Cell Wall transfer to artificial pond water and increasing the light intensity to 184 µmol photons m−2 s−1. Characteristics in the Alpine Spirogyra This, however was only possible in early spring, suggesting that the isolated cultures had an inter- mirabilis (Zygnematophyceae, nal rhythm. -
Emerging Interaction Patterns in the Emiliania Huxleyi-Ehv System
viruses Article Emerging Interaction Patterns in the Emiliania huxleyi-EhV System Eliana Ruiz 1,*, Monique Oosterhof 1,2, Ruth-Anne Sandaa 1, Aud Larsen 1,3 and António Pagarete 1 1 Department of Biology, University of Bergen, Bergen 5006, Norway; [email protected] (R.-A.S.); [email protected] (A.P.) 2 NRL for fish, Shellfish and Crustacean Diseases, Central Veterinary Institute of Wageningen UR, Lelystad 8221 RA, The Nederlands; [email protected] 3 Uni Research Environment, Nygårdsgaten 112, Bergen 5008, Norway; [email protected] * Correspondence: [email protected]; Tel.: +47-5558-8194 Academic Editors: Mathias Middelboe and Corina Brussaard Received: 30 January 2017; Accepted: 16 March 2017; Published: 22 March 2017 Abstract: Viruses are thought to be fundamental in driving microbial diversity in the oceanic planktonic realm. That role and associated emerging infection patterns remain particularly elusive for eukaryotic phytoplankton and their viruses. Here we used a vast number of strains from the model system Emiliania huxleyi/Emiliania huxleyi Virus to quantify parameters such as growth rate (µ), resistance (R), and viral production (Vp) capacities. Algal and viral abundances were monitored by flow cytometry during 72-h incubation experiments. The results pointed out higher viral production capacity in generalist EhV strains, and the virus-host infection network showed a strong co-evolution pattern between E. huxleyi and EhV populations. The existence of a trade-off between resistance and growth capacities was not confirmed. Keywords: Phycodnaviridae; Coccolithovirus; Coccolithophore; Haptophyta; Killing-the-winner; cost of resistance; infectivity trade-offs; algae virus; marine viral ecology; viral-host interactions 1. -
Green Algae in Tundra Soils Affected by Coal Mine Pollutions*
Biologia 63/6: 831—835, 2008 Section Botany DOI: 10.2478/s11756-008-0107-y Green algae in tundra soils affected by coal mine pollutions* Elena N. Patova 1 &MarinaF.Dorokhova2 1Institute of Biology, Komi Scientific Centre, Ural Division, Russian Academy of Sciences, Kommunisticheskaya st. 28, 167982, Syktyvkar, Komi Republic, Russia; e-mail: [email protected] 2Moscow State University, Faculty of Geography, Vorobievy Gory GSP-2, 119992, Moscow, Russia; e-mail: doro- [email protected] Abstract: Green algal communities were investigated in clean and pollution-impacted tundra soils around the large coal mine industrial complex of Vorkuta in the E. European Russian tundra. Samples were collected in three zones of open-cast coal mining with different degrees of pollution-impacted soil transformation. A total of 42 species of algae were found in all zones. The species richness decreased from 27 species in undisturbed zones to 19 species in polluted zones. Under open-cast coal mining impacts the community structure simplified, and the dominant algae complexes changed. Algae that are typical for clean soils disappeared from the communities. The total abundance of green algae (counted together with Xanthophyta) ranged between 100–120 × 103 (cells/g dry soils) in undisturbed zones and 0.5–50 × 103 in polluted zones. Soil algae appear to be better indicators of coal mine technogenic pollution than flowering plants and mosses. Key words: green algae; diversity; coal mine impact; soil; north-European Russian tundra Introduction tundra soils around the large industrial coal mine complex of Vorkuta in the north-European Russian tundra (Fig. 1). Soil algae are an important autotrophic component of This region is exposed to heavy air pollution. -
Zygnema Circumcarinatum SAG 698-1A and SAG 698-1B) and a Rapid Method to Estimate Nuclear Genome Size of Zygnematophycean Green Algae
University of Nebraska - Lincoln DigitalCommons@University of Nebraska - Lincoln Faculty Publications in Food Science and Technology Food Science and Technology Department 2021 Characterization of Two Zygnema Strains (Zygnema circumcarinatum SAG 698-1a and SAG 698-1b) and a Rapid Method to Estimate Nuclear Genome Size of Zygnematophycean Green Algae Xuehuan Feng University of Nebraska-Lincoln, [email protected] Andreas Holzinger University of Innsbruck, [email protected] Charlotte Permann University of Innsbruck Dirk Anderson University of Innsbruck Yanbin Yin University of Nebraska – Lincoln, [email protected] Follow this and additional works at: https://digitalcommons.unl.edu/foodsciefacpub Part of the Food Science Commons Feng, Xuehuan; Holzinger, Andreas; Permann, Charlotte; Anderson, Dirk; and Yin, Yanbin, "Characterization of Two Zygnema Strains (Zygnema circumcarinatum SAG 698-1a and SAG 698-1b) and a Rapid Method to Estimate Nuclear Genome Size of Zygnematophycean Green Algae" (2021). Faculty Publications in Food Science and Technology. 412. https://digitalcommons.unl.edu/foodsciefacpub/412 This Article is brought to you for free and open access by the Food Science and Technology Department at DigitalCommons@University of Nebraska - Lincoln. It has been accepted for inclusion in Faculty Publications in Food Science and Technology by an authorized administrator of DigitalCommons@University of Nebraska - Lincoln. fpls-12-610381 February 4, 2021 Time: 15:26 # 1 ORIGINAL RESEARCH published: 10 February 2021 doi: 10.3389/fpls.2021.610381 -
Is Chloroplastic Class IIA Aldolase a Marine Enzyme&Quest;
The ISME Journal (2016) 10, 2767–2772 © 2016 International Society for Microbial Ecology All rights reserved 1751-7362/16 www.nature.com/ismej SHORT COMMUNICATION Is chloroplastic class IIA aldolase a marine enzyme? Hitoshi Miyasaka1, Takeru Ogata1, Satoshi Tanaka2, Takeshi Ohama3, Sanae Kano4, Fujiwara Kazuhiro4,7, Shuhei Hayashi1, Shinjiro Yamamoto1, Hiro Takahashi5, Hideyuki Matsuura6 and Kazumasa Hirata6 1Department of Applied Life Science, Sojo University, Kumamoto, Japan; 2The Kansai Electric Power Co., Environmental Research Center, Keihanna-Plaza, Kyoto, Japan; 3School of Environmental Science and Engineering, Kochi University of Technology, Kochi, Japan; 4Chugai Technos Corporation, Hiroshima, Japan; 5Graduate School of Horticulture, Faculty of Horticulture, Chiba University, Chiba, Japan and 6Environmental Biotechnology Laboratory, Graduate School of Pharmaceutical Sciences, Osaka University, Osaka, Japan Expressed sequence tag analyses revealed that two marine Chlorophyceae green algae, Chlamydo- monas sp. W80 and Chlamydomonas sp. HS5, contain genes coding for chloroplastic class IIA aldolase (fructose-1, 6-bisphosphate aldolase: FBA). These genes show robust monophyly with those of the marine Prasinophyceae algae genera Micromonas, Ostreococcus and Bathycoccus, indicating that the acquisition of this gene through horizontal gene transfer by an ancestor of the green algal lineage occurred prior to the divergence of the core chlorophytes (Chlorophyceae and Treboux- iophyceae) and the prasinophytes. The absence of this gene in some freshwater chlorophytes, such as Chlamydomonas reinhardtii, Volvox carteri, Chlorella vulgaris, Chlorella variabilis and Coccomyxa subellipsoidea, can therefore be explained by the loss of this gene somewhere in the evolutionary process. Our survey on the distribution of this gene in genomic and transcriptome databases suggests that this gene occurs almost exclusively in marine algae, with a few exceptions, and as such, we propose that chloroplastic class IIA FBA is a marine environment-adapted enzyme. -
Community Characteristics Analysis of Eukaryotic Microplankton Via ITS Gene Metabarcoding Based on Environmental DNA in Lower Reaches of Qiantang River, China
Open Journal of Animal Sciences, 2021, 11, 105-124 https://www.scirp.org/journal/ojas ISSN Online: 2161-7627 ISSN Print: 2161-7597 Community Characteristics Analysis of Eukaryotic Microplankton via ITS Gene Metabarcoding Based on Environmental DNA in Lower Reaches of Qiantang River, China Aiju Zhang1, Jun Wang1, Yabin Hao1, Shanshi Xiao1, Wei Luo1, Ganxiang Wang2, Zhiming Zhou1 1Agriculture Ministry Key Laboratory of Healthy Freshwater Aquaculture, Key Laboratory of Freshwater Aquaculture Genetic and Breeding of Zhejiang Province, Zhejiang Research Center of East China Sea Fishery Research Institute, Zhejiang Institute of Freshwater Fisheries, Huzhou, China 2Pinghu Fisheries Technology Promotion Center, Pinghu, China How to cite this paper: Zhang, A.J., Wang, Abstract J., Hao, Y.B., Xiao, S.S., Luo, W., Wang, G.X. and Zhou, Z.M. (2021) Community Eukaryotic microplankton plays an important role in water biotic community Characteristics Analysis of Eukaryotic and in maintaining the stability of water ecosystems. Environmental DNA Microplankton via ITS Gene Metabarcod- metabarcoding provides the opportunity to integrate traditional and emerg- ing Based on Environmental DNA in Low- er Reaches of Qiantang River, China. Open ing approaches to discover more new species, and develop molecular biotic Journal of Animal Sciences, 11, 105-124. indices that can be more rapidly, frequently, and robustly used in water qual- https://doi.org/10.4236/ojas.2021.112009 ity assessments. In order to examine assemblages of eukaryotic microplank- ton in lower reaches of Qiantang River, ITS gene metabarcoding technology Received: January 13, 2021 based on environmental DNA was carried out. As a result, various species of Accepted: March 30, 2021 Published: April 2, 2021 phytoplankton, fungi and zooplankton were annotated on. -
Altitudinal Zonation of Green Algae Biodiversity in the French Alps
Altitudinal Zonation of Green Algae Biodiversity in the French Alps Adeline Stewart, Delphine Rioux, Fréderic Boyer, Ludovic Gielly, François Pompanon, Amélie Saillard, Wilfried Thuiller, Jean-Gabriel Valay, Eric Marechal, Eric Coissac To cite this version: Adeline Stewart, Delphine Rioux, Fréderic Boyer, Ludovic Gielly, François Pompanon, et al.. Altitu- dinal Zonation of Green Algae Biodiversity in the French Alps. Frontiers in Plant Science, Frontiers, 2021, 12, pp.679428. 10.3389/fpls.2021.679428. hal-03258608 HAL Id: hal-03258608 https://hal.archives-ouvertes.fr/hal-03258608 Submitted on 11 Jun 2021 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. fpls-12-679428 June 4, 2021 Time: 14:28 # 1 ORIGINAL RESEARCH published: 07 June 2021 doi: 10.3389/fpls.2021.679428 Altitudinal Zonation of Green Algae Biodiversity in the French Alps Adeline Stewart1,2,3, Delphine Rioux3, Fréderic Boyer3, Ludovic Gielly3, François Pompanon3, Amélie Saillard3, Wilfried Thuiller3, Jean-Gabriel Valay2, Eric Maréchal1* and Eric Coissac3* on behalf of The ORCHAMP Consortium 1 Laboratoire de Physiologie Cellulaire et Végétale, CEA, CNRS, INRAE, IRIG, Université Grenoble Alpes, Grenoble, France, 2 Jardin du Lautaret, CNRS, Université Grenoble Alpes, Grenoble, France, 3 Université Grenoble Alpes, Université Savoie Mont Blanc, CNRS, LECA, Grenoble, France Mountain environments are marked by an altitudinal zonation of habitat types. -
Biomass Productivity.Pdf
Universidad de Huelva Departamento de Química y Ciencia de los Materiales Biomass productivity enhancement and lutein enrichment of an acidic environment microalga Memoria para optar al grado de doctora presentada por: Isabel Mª Vaquero Calañas Fecha de lectura: 5 de diciembre de 2013 Bajo la dirección del doctor: Carlos Vílchez Lobato Huelva, 2013 UNIVERSIDAD DE HUELVA FACULTAD DE CIENCIAS EXPERIMENTALES DEPARTAMENTO DE QUÍMICA Y CIENCIA DE LOS MATERIALES “PROFESOR JOSÉ CARLOS VÍLCHEZ MARTÍN” BIOMASS PRODUCTIVITY ENHANCEMENT AND LUTEIN ENRICHMENT OF AN ACIDIC ENVIRONMENT MICROALGA “MEJORA DE LA PRODUCTIVIDAD DE BIOMASA Y ENRIQUECIMIENTO EN LUTEINA DE UNA MICROALGA DE AMBIENTE ACIDO” PROGRAMA DE DOCTORADO CIENCIA Y TECNOLOGÍA QUÍMICA MEMORIA PRESENTADA PARA OPTAR AL GRADO DE DOCTOR POR: Isabel María Vaquero Calañas Trabajo presentado bajo la dirección de: Dr. Carlos Vílchez Lobato Huelva, 2013 Los hombres ocupan muy poco lugar sobre la tierra… Las personas mayores no te creerán, seguramente, pues siempre se imaginan que ocupan mucho sitio. (“El Principito” Antoine de SaintExupéry) CONTENTS (…) Science does not, by itself, advocate courses of human action, but it can certainly illuminate the possible consequences of alternative courses.(…)” (Carl Sagan) Contents ABSTRACT 1 RESUMEN 5 CHAPTER I: Introduction, thesis outline and aims 9 1. MICROORGANISMS LIFE OF EXTREME ENVIRONMENTS 11 2. ACIDIC MICROALGAE: TINTO RIVER 18 3. PHYSIOLOGICAL ADAPTATIONS OF ACIDENVIRONMENT 21 MICROALGAE 4. MICROALGAL CAROTENOIDS 25 5. MICROALGAL CULTIVATION SYSTEMS 39 6. COCCOMYXA ONUBENSIS 45 7. THESIS OUTLINE 48 8. AIMS 51 CHAPTER II: Efficient inorganic carbon utilization as a tool to enhance acid‐environment microalgal growth 53 1. ABSTRACT 55 2. -
CONTROL of CELL DIVISION in the FILAMENTOUS, GREEN ALGA ZYGNEMA by Robert Dale Staker a Thesis Submitted to the Faculty of the D
Control of cell division in the filamentous green alga Zygnema Item Type text; Thesis-Reproduction (electronic) Authors Staker, Robert Dale, 1945- Publisher The University of Arizona. Rights Copyright © is held by the author. Digital access to this material is made possible by the University Libraries, University of Arizona. Further transmission, reproduction or presentation (such as public display or performance) of protected items is prohibited except with permission of the author. Download date 25/09/2021 05:42:58 Link to Item http://hdl.handle.net/10150/318132 CONTROL OF CELL DIVISION IN THE FILAMENTOUS, GREEN ALGA ZYGNEMA by Robert Dale Staker A Thesis Submitted to the Faculty of the DEPARTMENT OF BIOLOGICAL SCIENCES In Partial Fulfillment of the Requirements For the Degree of MASTER OF SCIENCE WITH A MAJOR IN BOTANY In the Graduate College THE UNIVERSITY OF ARIZONA 1 9 7 S STATEMENT BY AUTHOR This thesis has been submitted in partial fulfill ment of requirements for an advanced degree at The University of Arizona and is deposited in the University Library to be made available to borrowers under rules of the Library, Brief quotations from this thesis are allowable without special permission, provided that accurate acknowledgment of source is made. Requests for permission for extended quotation from or reproduction of this manuscript in whole or in part may be granted by the head of the major department or the Dean of the Graduate College when in his judgment the proposed use of the material is in the interests of scholarship. In all other instances, however, permission must be obtained from the author. -
A Taxonomic Reassessment of Chlamydomonas Meslinii (Volvocales, Chlorophyceae) with a Description of Paludistella Gen.Nov
Phytotaxa 432 (1): 065–080 ISSN 1179-3155 (print edition) https://www.mapress.com/j/pt/ PHYTOTAXA Copyright © 2020 Magnolia Press Article ISSN 1179-3163 (online edition) https://doi.org/10.11646/phytotaxa.432.1.6 A taxonomic reassessment of Chlamydomonas meslinii (Volvocales, Chlorophyceae) with a description of Paludistella gen.nov. HANI SUSANTI1,6, MASAKI YOSHIDA2, TAKESHI NAKAYAMA2, TAKASHI NAKADA3,4 & MAKOTO M. WATANABE5 1Life Science Innovation, School of Integrative and Global Major, University of Tsukuba, 1-1-1 Tennodai, Tsukuba, Ibaraki, 305-8577, Japan. 2Faculty of Life and Environmental Sciences, University of Tsukuba, 1-1-1 Tennodai, Tsukuba 305-8577, Japan. 3Institute for Advanced Biosciences, Keio University, Tsuruoka, Yamagata, 997-0052, Japan. 4Systems Biology Program, Graduate School of Media and Governance, Keio University, Fujisawa, Kanagawa, 252-8520, Japan. 5Algae Biomass Energy System Development and Research Center, University of Tsukuba. 6Research Center for Biotechnology, Indonesian Institute of Sciences, Jl. Raya Bogor KM 46 Cibinong West Java, Indonesia. Corresponding author: [email protected] Abstract Chlamydomonas (Volvocales, Chlorophyceae) is a large polyphyletic genus that includes numerous species that should be classified into independent genera. The present study aimed to examine the authentic strain of Chlamydomonas meslinii and related strains based on morphological and molecular data. All the strains possessed an asteroid chloroplast with a central pyrenoid and hemispherical papilla; however, they were different based on cell and stigmata shapes. Molecular phylogenetic analyses based on 18S rDNA, atpB, and psaB indicated that the strains represented a distinct subclade in the clade Chloromonadinia. The secondary structure of ITS-2 supported the separation of the strains into four species. -
Neoproterozoic Origin and Multiple Transitions to Macroscopic Growth in Green Seaweeds
bioRxiv preprint doi: https://doi.org/10.1101/668475; this version posted June 12, 2019. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. Neoproterozoic origin and multiple transitions to macroscopic growth in green seaweeds Andrea Del Cortonaa,b,c,d,1, Christopher J. Jacksone, François Bucchinib,c, Michiel Van Belb,c, Sofie D’hondta, Pavel Škaloudf, Charles F. Delwicheg, Andrew H. Knollh, John A. Raveni,j,k, Heroen Verbruggene, Klaas Vandepoeleb,c,d,1,2, Olivier De Clercka,1,2 Frederik Leliaerta,l,1,2 aDepartment of Biology, Phycology Research Group, Ghent University, Krijgslaan 281, 9000 Ghent, Belgium bDepartment of Plant Biotechnology and Bioinformatics, Ghent University, Technologiepark 71, 9052 Zwijnaarde, Belgium cVIB Center for Plant Systems Biology, Technologiepark 71, 9052 Zwijnaarde, Belgium dBioinformatics Institute Ghent, Ghent University, Technologiepark 71, 9052 Zwijnaarde, Belgium eSchool of Biosciences, University of Melbourne, Melbourne, Victoria, Australia fDepartment of Botany, Faculty of Science, Charles University, Benátská 2, CZ-12800 Prague 2, Czech Republic gDepartment of Cell Biology and Molecular Genetics, University of Maryland, College Park, MD 20742, USA hDepartment of Organismic and Evolutionary Biology, Harvard University, Cambridge, Massachusetts, 02138, USA. iDivision of Plant Sciences, University of Dundee at the James Hutton Institute, Dundee, DD2 5DA, UK jSchool of Biological Sciences, University of Western Australia (M048), 35 Stirling Highway, WA 6009, Australia kClimate Change Cluster, University of Technology, Ultimo, NSW 2006, Australia lMeise Botanic Garden, Nieuwelaan 38, 1860 Meise, Belgium 1To whom correspondence may be addressed. Email [email protected], [email protected], [email protected] or [email protected]. -
The Symbiotic Green Algae, Oophila (Chlamydomonadales
University of Connecticut OpenCommons@UConn Master's Theses University of Connecticut Graduate School 12-16-2016 The yS mbiotic Green Algae, Oophila (Chlamydomonadales, Chlorophyceae): A Heterotrophic Growth Study and Taxonomic History Nikolaus Schultz University of Connecticut - Storrs, [email protected] Recommended Citation Schultz, Nikolaus, "The yS mbiotic Green Algae, Oophila (Chlamydomonadales, Chlorophyceae): A Heterotrophic Growth Study and Taxonomic History" (2016). Master's Theses. 1035. https://opencommons.uconn.edu/gs_theses/1035 This work is brought to you for free and open access by the University of Connecticut Graduate School at OpenCommons@UConn. It has been accepted for inclusion in Master's Theses by an authorized administrator of OpenCommons@UConn. For more information, please contact [email protected]. The Symbiotic Green Algae, Oophila (Chlamydomonadales, Chlorophyceae): A Heterotrophic Growth Study and Taxonomic History Nikolaus Eduard Schultz B.A., Trinity College, 2014 A Thesis Submitted in Partial Fulfillment of the Requirements for the Degree of Master of Science at the University of Connecticut 2016 Copyright by Nikolaus Eduard Schultz 2016 ii ACKNOWLEDGEMENTS This thesis was made possible through the guidance, teachings and support of numerous individuals in my life. First and foremost, Louise Lewis deserves recognition for her tremendous efforts in making this work possible. She has performed pioneering work on this algal system and is one of the preeminent phycologists of our time. She has spent hundreds of hours of her time mentoring and teaching me invaluable skills. For this and so much more, I am very appreciative and humbled to have worked with her. Thank you Louise! To my committee members, Kurt Schwenk and David Wagner, thank you for your mentorship and guidance.