A New Species and a New Combination of Truffle-Like Fungi in the Geopora
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Ectomycorrhizal Communities of Quercus Garryana Are Similar on Serpentine and Nonserpentine Soils
Plant Soil (2009) 315:185–194 DOI 10.1007/s11104-008-9743-9 REGULAR ARTICLE Ectomycorrhizal communities of Quercus garryana are similar on serpentine and nonserpentine soils A. Mariah Moser & Jonathan L. Frank & Jad A. D’Allura & Darlene Southworth Received: 17 March 2008 /Accepted: 1 August 2008 / Published online: 16 August 2008 # The Author(s) 2008. This article is published with open access at Springerlink.com Abstract Serpentine soils, rich in iron, magnesium, that ectomycorrhizal species associated with Q. and heavy metals, select for unique plant communities garryana exhibit edaphic tolerance and were neither and for endemic species. Because mycorrhizal fungi reduced nor excluded by serpentinite or peridotite mediate the interaction between plants and soil, we parent materials. hypothesized that distinct ectomycorrhizal fungi would colonize Quercus garryana roots on serpentine Keywords Ectomycorrhiza . Heavy metal tolerance . and nonserpentine soils. We sampled roots of Q. Josephine ophiolite . Non-metric multidimensional garryana on serpentine soils at two locations in the scaling . Oaks . Quercus garryana . Serpentine Klamath-Siskiyou Mountains of southwestern Oregon and identified ectomycorrhizas by morphological and molecular methods. The same six most abundant and Introduction most frequent mycorrhizal species, Cenococcum geo- philum, Tuber candidum, Genea harknessii, Tomen- The ectomycorrhizal community of Quercus gar- tella sp., Sebacina sp., and Inocybe sp., were found ryana Dougl. ex Hook. exhibits rich biodiversity on serpentine and nonserpentine soils. Based on (Valentine et al. 2004). On alluvial soils in Southern similarities calculated using the Sørensen index in Oregon, roots formed mycorrhizas with 40 fungal Non-metric Multidimensional Scaling, mycorrhizal species; the most common were Cenococcum geo- communities on serpentine and nonserpentine soils philum and Tuber candidum. -
Peziza and Pezizaceae Inferred from Multiple Nuclear Genes: RPB2, -Tubulin, and LSU Rdna
Molecular Phylogenetics and Evolution 36 (2005) 1–23 www.elsevier.com/locate/ympev Evolutionary relationships of the cup-fungus genus Peziza and Pezizaceae inferred from multiple nuclear genes: RPB2, -tubulin, and LSU rDNA Karen Hansen ¤, Katherine F. LoBuglio, Donald H. PWster Harvard University Herbaria, Cambridge, MA 02138, USA Received 5 May 2004; revised 17 December 2004 Available online 22 April 2005 Abstract To provide a robust phylogeny of Pezizaceae, partial sequences from two nuclear protein-coding genes, RPB2 (encoding the sec- ond largest subunit of RNA polymerase II) and -tubulin, were obtained from 69 and 72 specimens, respectively, to analyze with nuclear ribosomal large subunit RNA gene sequences (LSU). The three-gene data set includes 32 species of Peziza, and 27 species from nine additional epigeous and six hypogeous (truZe) pezizaceous genera. Analyses of the combined LSU, RPB2, and -tubulin data set using parsimony, maximum likelihood, and Bayesian approaches identify 14 Wne-scale lineages within Pezizaceae. Species of Peziza occur in eight of the lineages, spread among other genera of the family, conWrming the non-monophyly of the genus. Although parsimony analyses of the three-gene data set produced a nearly completely resolved strict consensus tree, with increased conWdence, relationships between the lineages are still resolved with mostly weak bootstrap support. Bayesian analyses of the three- gene data, however, show support for several more inclusive clades, mostly congruent with Bayesian analyses of RPB2. No strongly supported incongruence was found among phylogenies derived from the separate LSU, RPB2, and -tubulin data sets. The RPB2 region appeared to be the most informative single gene region based on resolution and clade support, and accounts for the greatest number of potentially parsimony informative characters within the combined data set, followed by the LSU and the -tubulin region. -
The Ascomycota
Papers and Proceedings of the Royal Society of Tasmania, Volume 139, 2005 49 A PRELIMINARY CENSUS OF THE MACROFUNGI OF MT WELLINGTON, TASMANIA – THE ASCOMYCOTA by Genevieve M. Gates and David A. Ratkowsky (with one appendix) Gates, G. M. & Ratkowsky, D. A. 2005 (16:xii): A preliminary census of the macrofungi of Mt Wellington, Tasmania – the Ascomycota. Papers and Proceedings of the Royal Society of Tasmania 139: 49–52. ISSN 0080-4703. School of Plant Science, University of Tasmania, Private Bag 55, Hobart, Tasmania 7001, Australia (GMG*); School of Agricultural Science, University of Tasmania, Private Bag 54, Hobart, Tasmania 7001, Australia (DAR). *Author for correspondence. This work continues the process of documenting the macrofungi of Mt Wellington. Two earlier publications were concerned with the gilled and non-gilled Basidiomycota, respectively, excluding the sequestrate species. The present work deals with the non-sequestrate Ascomycota, of which 42 species were found on Mt Wellington. Key Words: Macrofungi, Mt Wellington (Tasmania), Ascomycota, cup fungi, disc fungi. INTRODUCTION For the purposes of this survey, all Ascomycota having a conspicuous fruiting body were considered, excluding Two earlier papers in the preliminary documentation of the endophytes. Material collected during forays was described macrofungi of Mt Wellington, Tasmania, were confined macroscopically shortly after collection, and examined to the ‘agarics’ (gilled fungi) and the non-gilled species, microscopically to obtain details such as the size of the -
The 2014 Patrice Benson Memorial NAMA Foray October 9-12, 2014
VOLUME 54: 3 May-June 2014 www.namyco.org he 2014 Patrice Benson Memorial NAMA Foray atonville, Washington TE ctober 9-12, 2014 It’s the momentO you’ve all been waiting for—registration time for the 2014 NAMA Foray! Registration will open Monday, May 12 at 9 a.m. Pacific time. Foray attendees and staff will be limited to 250 people, so be sure to register early to get your preferred choice of lodging and to reserve your spot in a pre-foray workshop. Registration will be handled online through the PSMS registration system at www.psms.org/nama2014. If you are unable to complete registration online and need a printed form, contact Pacita Roberts immediately at (206) 498-0922 or mail to: [email protected]. The foray begins Thursday evening, Oct. 9, with dinner and speakers, and ends on Sunday morning, Oct. 12, after the mushroom collection walk-through. The basic package includes 3 nights and 8 meals. The package in- cluding a pre-foray workshop or the trustees meeting starts 2 days earlier on Tuesday night, Oct. 7, and includes 5 nights and 14 meals. The actual workshops and trustees meeting occur on Wednesday, Oct. 8. Speakers Dr. Steve Trudell will serve as the foray mycologist, and he, along with program chair Milton Tam, have ar- ranged an amazing lineup of presenters for 2014. Although the list is not quite finalized, this stellar cast of faculty has already committed: Alissa Allen, Dr. Denis Benjamin, Dr. Michael Beug, Dr. Tom Bruns, Dr. Cathy Cripps, Dr. Jim Ginns, Dr. -
Ascocarp Development in Anthracobia Melaloma
AN ABSTRACT OF THE THESIS OF HAROLD JULIUS LARSEN, JR. for the MASTER OF ARTS (Name) (Degree) in BOTANY presented on it (Major) (Date) Title: ASCOCA.RP DEVELOPMENT IN ANTHRACOBIA MELALOMA. Abstract approved:Redacted for privacy William C. Denison Cultural and developmental characteristics of a collection of Anthracobia melaloma with a brown hymeniurn and a barred exterior appearance were examined.It grows well in culture on CM and CMMY agar media and has a growth rate of 17 mm in 18 hours.It is heterothallic and produces asexual rnultinucleate arthrospores after incubation at 300C or above for several days in succession.These arthrospores germinate readily after transfer to fresh media. Antheridial hyphae and archicarps are produced by both mating types although the negative mating type isolates producemore abun- dant archicarps.Antheridia are indistinguishable from vegetative hyphae until just prior to plasmogamy when they become swollen. Septal pads arise on the septa separating the cells of the trichogyne and ascogonium subsequent to plasmogamy and persist throughout development. The paraphyses, the ectal and medullary excipulum, and the excipular hairs are all derived from the sheathing hyphae. Ascogenous hyphae and asci are derived from the largest cells of the ascogonium. A haploid chromosome number of four is confirmed for the species. Exposure to fluorescent light was unnecessary for apothecial induction, but did enhance apothecial maturation and the production of hyrnenial carotenoid pigments.Constant exposure to light inhibited -
Curriculum Vitae Rosaria Ann Healy, Ph.D. Assistant Scientist Dept. Of
Curriculum Vitae Rosaria Ann Healy, Ph.D. Assistant Scientist Dept. of Plant Pathology, University of Florida 2517 Fifield Hall, Gainesville, FL 32611 515-231-2562, [email protected] Education 2013 Ph.D. University of Minnesota, St. Paul, MN Co-Advisors: Dr. David McLaughlin and Dr. Imke Schmitt 2002 M.S. Iowa State University, Ames, IA Advisor: Dr. Lois H. Tiffany 1977 B.S. College of St. Benedict, St. Joseph, MN Research Experience 2016 to present Assistant Research Scientist, University of Florida, Gainesville, FL 2015 Post Doctoral Research University of Florida, Gainesville, FL Supervisor: Dr. Matthew E. Smith 2013-2015 Post Doctoral Research Harvard University, Cambridge, MA Advisor: Dr. Donald H. Pfister 2011-2012 Research Assistant University of Minnesota, St. Paul, MN Advisor: Dr. David McLaughlin: Assembling the Fungal Tree of Life 1999-2005 Research Associate Iowa State University, Ames, IA Advisor: Dr. Harry T. Horner Publications • 2021 Orihara, T, R Healy, A Corrales, ME Smith. Multi-locus phylogenies reveal three new truffle-like taxa and the traces of interspecific hybridization in Octaviania Healy CV 2 (Boletales). Submitted to IMA Fungus • 2021 Castellano, MA, CD Crabtree, D Mitchell, RA Healy. Eight new Elaphomyces species (Elaphomycetaceae, Eurotiales, Ascomycota) from eastern North America. Fungal Systematics and Evolution 7:113-131. • 2020 Kraisitudomsook N, RA Healy, DH Pfister, C Truong, E Nouhra, F Kuhar, AB Mujic, JM Trappe, ME Smith. Resurrecting the genus Geomorium: Systematic study of fungi in the genera Underwoodia and Gymnohydnotrya (Pezizales) with the description of three new South American species. Persoonia 44: 98-112. • 2019 Grupe AG II, N Kraisitudomsook, R Healy, D Zelmanovich, C Anderson, G Guevara, J Trappe, ME Smith. -
The Macrofungi Checklist of Liguria (Italy): the Current Status of Surveys
Posted November 2008. Summary published in MYCOTAXON 105: 167–170. 2008. The macrofungi checklist of Liguria (Italy): the current status of surveys MIRCA ZOTTI1*, ALFREDO VIZZINI 2, MIDO TRAVERSO3, FABRIZIO BOCCARDO4, MARIO PAVARINO1 & MAURO GIORGIO MARIOTTI1 *[email protected] 1DIP.TE.RIS - Università di Genova - Polo Botanico “Hanbury”, Corso Dogali 1/M, I16136 Genova, Italy 2 MUT- Università di Torino, Dipartimento di Biologia Vegetale, Viale Mattioli 25, I10125 Torino, Italy 3Via San Marino 111/16, I16127 Genova, Italy 4Via F. Bettini 14/11, I16162 Genova, Italy Abstract— The paper is aimed at integrating and updating the first edition of the checklist of Ligurian macrofungi. Data are related to mycological researches carried out mainly in some holm-oak woods through last three years. The new taxa collected amount to 172: 15 of them belonging to Ascomycota and 157 to Basidiomycota. It should be highlighted that 12 taxa have been recorded for the first time in Italy and many species are considered rare or infrequent. Each taxa reported consists of the following items: Latin name, author, habitat, height, and the WGS-84 Global Position System (GPS) coordinates. This work, together with the original Ligurian checklist, represents a contribution to the national checklist. Key words—mycological flora, new reports Introduction Liguria represents a very interesting region from a mycological point of view: macrofungi, directly and not directly correlated to vegetation, are frequent, abundant and quite well distributed among the species. This topic is faced and discussed in Zotti & Orsino (2001). Observations prove an high level of fungal biodiversity (sometimes called “mycodiversity”) since Liguria, though covering only about 2% of the Italian territory, shows more than 36 % of all the species recorded in Italy. -
The Phylogeny of Plant and Animal Pathogens in the Ascomycota
Physiological and Molecular Plant Pathology (2001) 59, 165±187 doi:10.1006/pmpp.2001.0355, available online at http://www.idealibrary.com on MINI-REVIEW The phylogeny of plant and animal pathogens in the Ascomycota MARY L. BERBEE* Department of Botany, University of British Columbia, 6270 University Blvd, Vancouver, BC V6T 1Z4, Canada (Accepted for publication August 2001) What makes a fungus pathogenic? In this review, phylogenetic inference is used to speculate on the evolution of plant and animal pathogens in the fungal Phylum Ascomycota. A phylogeny is presented using 297 18S ribosomal DNA sequences from GenBank and it is shown that most known plant pathogens are concentrated in four classes in the Ascomycota. Animal pathogens are also concentrated, but in two ascomycete classes that contain few, if any, plant pathogens. Rather than appearing as a constant character of a class, the ability to cause disease in plants and animals was gained and lost repeatedly. The genes that code for some traits involved in pathogenicity or virulence have been cloned and characterized, and so the evolutionary relationships of a few of the genes for enzymes and toxins known to play roles in diseases were explored. In general, these genes are too narrowly distributed and too recent in origin to explain the broad patterns of origin of pathogens. Co-evolution could potentially be part of an explanation for phylogenetic patterns of pathogenesis. Robust phylogenies not only of the fungi, but also of host plants and animals are becoming available, allowing for critical analysis of the nature of co-evolutionary warfare. Host animals, particularly human hosts have had little obvious eect on fungal evolution and most cases of fungal disease in humans appear to represent an evolutionary dead end for the fungus. -
Pyronemataceae, Pezizales) Based on Molecular and Morphological Data
Mycol Progress (2012) 11:699–710 DOI 10.1007/s11557-011-0779-5 ORIGINAL ARTICLE The taxonomic position of the genus Heydenia (Pyronemataceae, Pezizales) based on molecular and morphological data Adrian Leuchtmann & Heinz Clémençon Received: 12 May 2011 /Revised: 19 July 2011 /Accepted: 21 July 2011 /Published online: 9 August 2011 # German Mycological Society and Springer 2011 Abstract Molecular and morphological data indicate that easily becomes accepted as true, without proof, in the the genus Heydenia is closely related to the cleistothecial mycological literature. One case of such questionable ascomycete Orbicula (Pyronemataceae, Pezizales). Obser- reasoning is exemplified by the genus Heydenia. vations on the disposition and the immediate surroundings Since fungi with fruiting bodies of unusual or misleading of immature spores within the spore capsule suggest that form are difficult to fit into a classification based on the Heydenia fruiting bodies are teleomorphs producing morphology alone, many genera were left unclassified early evanescent asci in stipitate cleistothecia. The once («incertae sedis») or were assigned by guesswork to a advocated identity of Heydenia with Onygena is refuted on taxonomic group until more objective criteria based on molecular grounds. Onygena arietina E. Fischer is trans- analyses of DNA sequences indicated a firm phylogenetic ferred to Heydenia. relationship. Examples of such genera are Torrendia (stipitate gasteromycete-like, Hallen et al. 2004), Thaxter- Keywords Ascomycota . Beta tubulin . Cleistothecium . ogaster (stipitate sequestrate, Peintner et al. 2002)and Histology. nuLSU . Orbicula . Phylogeny Physalacria (columnar hollow, Wilson and Desjardin 2005) among the basidiomycetes, and Neolecta (columnar, Landvik et al. 2001), Trichocoma (cup-shaped with a Introduction protruding tuft, Berbee et al. -
Phd. Thesis Sana Jabeen.Pdf
ECTOMYCORRHIZAL FUNGAL COMMUNITIES ASSOCIATED WITH HIMALAYAN CEDAR FROM PAKISTAN A dissertation submitted to the University of the Punjab in partial fulfillment of the requirements for the degree of DOCTOR OF PHILOSOPHY in BOTANY by SANA JABEEN DEPARTMENT OF BOTANY UNIVERSITY OF THE PUNJAB LAHORE, PAKISTAN JUNE 2016 TABLE OF CONTENTS CONTENTS PAGE NO. Summary i Dedication iii Acknowledgements iv CHAPTER 1 Introduction 1 CHAPTER 2 Literature review 5 Aims and objectives 11 CHAPTER 3 Materials and methods 12 3.1. Sampling site description 12 3.2. Sampling strategy 14 3.3. Sampling of sporocarps 14 3.4. Sampling and preservation of fruit bodies 14 3.5. Morphological studies of fruit bodies 14 3.6. Sampling of morphotypes 15 3.7. Soil sampling and analysis 15 3.8. Cleaning, morphotyping and storage of ectomycorrhizae 15 3.9. Morphological studies of ectomycorrhizae 16 3.10. Molecular studies 16 3.10.1. DNA extraction 16 3.10.2. Polymerase chain reaction (PCR) 17 3.10.3. Sequence assembly and data mining 18 3.10.4. Multiple alignments and phylogenetic analysis 18 3.11. Climatic data collection 19 3.12. Statistical analysis 19 CHAPTER 4 Results 22 4.1. Characterization of above ground ectomycorrhizal fungi 22 4.2. Identification of ectomycorrhizal host 184 4.3. Characterization of non ectomycorrhizal fruit bodies 186 4.4. Characterization of saprobic fungi found from fruit bodies 188 4.5. Characterization of below ground ectomycorrhizal fungi 189 4.6. Characterization of below ground non ectomycorrhizal fungi 193 4.7. Identification of host taxa from ectomycorrhizal morphotypes 195 4.8. -
Forming Ectomycorrhizal Fungi in the Interior Cedar-Hemlock Biogeoclimatic Zone of British Columbia
THE ROLE OF SCIURIDS AND MURIDS IN THE DISPERSAL OF TRUFFLE- FORMING ECTOMYCORRHIZAL FUNGI IN THE INTERIOR CEDAR-HEMLOCK BIOGEOCLIMATIC ZONE OF BRITISH COLUMBIA by Katherine Sidlar A THESIS SUBMITTED IN PARTIAL FULFILLMENT OF THE REQUIREMENTS FOR THE DEGREE OF MASTER OF SCIENCE in The College of Graduate Studies (Biology) THE UNIVERSITY OF BRITISH COLUMBIA (Okanagan) January 2012 © Katherine Sidlar, 2012 Abstract Ectomycorrhizal fungi form an integral tripartite relationship with trees and rodents whereby the fungi provide nutritional benefits for the trees, the trees provide carbohydrate for the fungi, and the rodents feed on the fruit bodies produced by the fungi and then disperse the fungal spores in their feces. When forests are harvested, new ectomycorrhizae must form. It has been assumed that dispersal beyond the root zone of surviving trees happens by way of animals dispersing the spores in their feces, but the importance of particular animal taxa to fungal spore dispersal into disturbed areas in the Interior Cedar Hemlock Biogeoclimatic zone of British Columbia has not previously been investigated. This study observed the occurrence and prevalence of hypogeous fruit bodies (truffles) of ectomycorrhizal fungi, and fungal spores in the feces of a range of rodent species. Truffles were excavated and sciurids (squirrels, chipmunks) and murids (mice, voles) were trapped on sites in a 7 to 102-year chronosequence, as well as unharvested sites adjacent to 7- and 25-year-old sites. The average truffle species richness in soil did not change significantly over the chronosequence. Rhizopogon species were present at all sites and treatments. Deer mice (Peromyscus maniculatus) and yellow-pine chipmunks (Tamias amoenus) were the most commonly trapped rodents across all site ages and were also the most likely to move between harvested and unharvested areas. -
Biological Diversity and Conservation ISSN
www.biodicon.com Biological Diversity and Conservation ISSN 1308-8084 Online; ISSN 1308-5301 Print 12/2 (2019) 193-196 Research article/Araştırma makalesi DOI: 10.5505/biodicon.2019.21931 Geopora clausa, A New Hypogeous Ascomycete Record for Turkey Yasin UZUN 1, Abdullah KAYA *1 ORCID: 0000-0002-6423-6085; 0000-0002-4654-1406 1 Karamanoğlu Mehmetbey University, Kamil Özdağ Science Faculty, Department of Biology, Karaman, Turkey Abstract Geopora clausa (Tul. & C. Tul.) Burds. (Pyronemataceae) is reported as new record for the first time from Turkey, based on the samples collected from Araklı district of Trabzon province. The taxon is described briefly and the photographs related to its macro and micromorphology are provided. Key words: biodiversity, false truffle, new record, macrofungi, taxonomy ---------- ---------- Geopora clausa, Türkiye İçin Yeni Bir Toprak Altı Askomiset Kaydı Özet Geopora clausa (Tul. & C. Tul.) Burds. (Pyronemataceae), Trabzon’un Araklı ilçesinden toplanan örneğe bağlı olarak, Türkiye’den ilk kez yeni kayıt olarak rapor edilmiştir. Takson kısaca betimlenmiş ve makro ve mikromorfolojisine ilişkin fotoğrafları verilmiştir. Anahtar kelimeler: Biyoçeşitlilik, yalancı trüf, yeni kayıt, makromantar, taksonomi 1. Introduction Geopora Harkn. is a genus in the family Pyronemataceae. It was first proposed by [1] for the truffle like fungus, G. cooperi Harkn. Later on the boundaries of the genus were expanded including some hypogeous, semihypogeous and epigeous species, with closed or cup-shaped ascocarps [2, 3]. The genus is characterised by entirely or partially hypogeous, globular, semiglobular or cup-shaped ascocarps, whitish, greyish or yellowish grey hymenium, cylindrical, eight spored and operculate asci, generally bifurcate, septate and hyaline paraphyses, ellipsoid, smooth ascospores mostly with one or two larger oil drops and more smaller oil drops [2,3].