Chapter 4: Alkenes and Alkynes 99
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Molecular Geometry Is the General Shape of a Molecule, As Determined by the Relative Positions of the Atomic Nuclei
Lecture Presentation Chapter 9 Molecular Geometries and Bonding Theories © 2012 Pearson Education, Inc. Chapter Goal • Lewis structures do not show shape and size of molecules. • Develop a relationship between two dimensional Lewis structure and three dimensional molecular shapes • Develop a sense of shapes and how those shapes are governed in large measure by the kind of bonds exist between the atoms making up the molecule © 2012 Pearson Education, Inc. Molecular geometry is the general shape of a molecule, as determined by the relative positions of the atomic nuclei. Copyright © Cengage Learning. All rights reserved. 10 | 3 The valence-shell electron-pair repulsion (VSEPR) model predicts the shapes of molecules and ions by assuming that the valence-shell electron pairs are arranged about each atom so that electron pairs are kept as far away from one another as possible, thereby minimizing electron pair repulsions. The diagram on the next slide illustrates this. Copyright © Cengage Learning. All rights reserved. 10 | 4 Two electron pairs are 180° apart (a linear arrangement). Three electron pairs are 120° apart in one plane (a trigonal planar arrangement). Four electron pairs are 109.5° apart in three dimensions (a tetrahedral arrangment). Copyright © Cengage Learning. All rights reserved. 10 | 5 Five electron pairs are arranged with three pairs in a plane 120° apart and two pairs at 90°to the plane and 180° to each other (a trigonal bipyramidal arrangement). Six electron pairs are 90° apart (an octahedral arrangement). This is illustrated on the next slide. Copyright © Cengage Learning. All rights reserved. 10 | 6 Copyright © Cengage Learning. All rights reserved. -
VSEPR Theory
VSEPR Theory The valence-shell electron-pair repulsion (VSEPR) model is often used in chemistry to predict the three dimensional arrangement, or the geometry, of molecules. This model predicts the shape of a molecule by taking into account the repulsion between electron pairs. This handout will discuss how to use the VSEPR model to predict electron and molecular geometry. Here are some definitions for terms that will be used throughout this handout: Electron Domain – The region in which electrons are most likely to be found (bonding and nonbonding). A lone pair, single, double, or triple bond represents one region of an electron domain. H2O has four domains: 2 single bonds and 2 nonbonding lone pairs. Electron Domain may also be referred to as the steric number. Nonbonding Pairs Bonding Pairs Electron domain geometry - The arrangement of electron domains surrounding the central atom of a molecule or ion. Molecular geometry - The arrangement of the atoms in a molecule (The nonbonding domains are not included in the description). Bond angles (BA) - The angle between two adjacent bonds in the same atom. The bond angles are affected by all electron domains, but they only describe the angle between bonding electrons. Lewis structure - A 2-dimensional drawing that shows the bonding of a molecule’s atoms as well as lone pairs of electrons that may exist in the molecule. Provided by VSEPR Theory The Academic Center for Excellence 1 April 2019 Octet Rule – Atoms will gain, lose, or share electrons to have a full outer shell consisting of 8 electrons. When drawing Lewis structures or molecules, each atom should have an octet. -
Sample Exercise 9.1 Using the VSEPR Model
Sample Exercise 9.1 Using the VSEPR Model – Use the VSEPR model to predict the molecular geometry of (a) O3, (b) SnCl3 . Solution Analyze: We are given the molecular formulas of a molecule and a polyatomic ion, both conforming to the general formula ABn and both having a central atom from the p block of the periodic table. Plan: To predict the molecular geometries of these species, we first draw their Lewis structures and then count the number of electron domains around the central atom. The number of electron domains gives the electron-domain geometry. We then obtain the molecular geometry from the arrangement of the domains that are due to bonds. (a) We can draw two resonance structures for O3: Because of resonance, the bonds between the central O atom and the outer O atoms are of equal length. In both resonance structures the central O atom is bonded to the two outer O atoms and has one nonbonding pair. Thus, there are three electron domains about the central O atoms. (Remember that a double bond counts as a single electron domain.) The arrangement of three electron domains is trigonal planar (Table 9.1). Two of the domains are from bonds, and one is due to a nonbonding pair. So, the molecule has a bent shape with an ideal bond angle of 120° (Table 9.2). Chemistry: The Central Science, Eleventh Edition Copyright ©2009 by Pearson Education, Inc. By Theodore E. Brown, H. Eugene LeMay, Bruce E. Bursten, and Catherine J. Murphy Upper Saddle River, New Jersey 07458 With contributions from Patrick Woodward All rights reserved. -
Polyphenolic Compounds Extracted and Purified from Buddleja Globosa
molecules Article Polyphenolic Compounds Extracted and Purified from Buddleja Globosa Hope (Buddlejaceae) Leaves Using Natural Deep Eutectic Solvents and Centrifugal Partition Chromatography Jeniffer Torres-Vega 1 , Sergio Gómez-Alonso 2 , José Pérez-Navarro 2 , Julio Alarcón-Enos 3 and Edgar Pastene-Navarrete 1,3,* 1 Laboratorio de Farmacognosia, Departamento de Farmacia, Facultad de Farmacia, Universidad de Concepción, Concepción PC4030000, Chile; [email protected] 2 Regional Institute for Applied Scientific Research, Faculty of Chemical Sciences, University of Castilla-La Mancha, PC13071 Castilla-La Mancha, Spain; [email protected] (S.G.-A.); [email protected] (J.P.-N.) 3 Laboratorio de Síntesis y Biotransformación de Productos Naturales, Universidad del Bío-Bío, Chillán PC3800708, Chile; [email protected] * Correspondence: [email protected]; Tel.: +56-(42)-246-3000 Abstract: Chemical profiling of Buddleja globosa was performed by high-performance liquid chro- matography coupled to electrospray ionization (HPLC-DAD-ESI-IT/MS) and quadrupole time-of-flight high-resolution mass spectrometry (HPLC-ESI-QTOF/MS). The identification of 17 main phenolic com- pounds in B. globosa leaf extracts was achieved. Along with caffeoyl glucoside isomers, caffeoylshikimic Citation: Torres-Vega, J.; acid and several verbascoside derivatives (β-hydroxyverbascoside and β-hydroxyisoverbascoside) were Gómez-Alonso, S.; Pérez-Navarro, J.; Alarcón-Enos, J.; Pastene-Navarrete, identified. Among flavonoid compounds, the presence of 6-hydroxyluteolin-7-O-glucoside, quercetin-3- E. Polyphenolic Compounds O-glucoside, luteolin 7-O-glucoside, apigenin 7-O-glucoside was confirmed. Campneoside I, forsytho- Extracted and Purified from Buddleja side B, lipedoside A and forsythoside A were identified along with verbascoside, isoverbascoside, Globosa Hope (Buddlejaceae) Leaves eukovoside and martynoside. -
Electron Ionization
Chapter 6 Chapter 6 Electron Ionization I. Introduction ......................................................................................................317 II. Ionization Process............................................................................................317 III. Strategy for Data Interpretation......................................................................321 1. Assumptions 2. The Ionization Process IV. Types of Fragmentation Pathways.................................................................328 1. Sigma-Bond Cleavage 2. Homolytic or Radical-Site-Driven Cleavage 3. Heterolytic or Charge-Site-Driven Cleavage 4. Rearrangements A. Hydrogen-Shift Rearrangements B. Hydride-Shift Rearrangements V. Representative Fragmentations (Spectra) of Classes of Compounds.......... 344 1. Hydrocarbons A. Saturated Hydrocarbons 1) Straight-Chain Hydrocarbons 2) Branched Hydrocarbons 3) Cyclic Hydrocarbons B. Unsaturated C. Aromatic 2. Alkyl Halides 3. Oxygen-Containing Compounds A. Aliphatic Alcohols B. Aliphatic Ethers C. Aromatic Alcohols D. Cyclic Ethers E. Ketones and Aldehydes F. Aliphatic Acids and Esters G. Aromatic Acids and Esters 4. Nitrogen-Containing Compounds A. Aliphatic Amines B. Aromatic Compounds Containing Atoms of Nitrogen C. Heterocyclic Nitrogen-Containing Compounds D. Nitro Compounds E. Concluding Remarks on the Mass Spectra of Nitrogen-Containing Compounds 5. Multiple Heteroatoms or Heteroatoms and a Double Bond 6. Trimethylsilyl Derivative 7. Determining the Location of Double Bonds VI. Library -
C's Name Formula Bp (ºC) Structure 1 Methane CH4 -162 H-(CH2)
Chem 350 Jasperse Ch. 3 Handouts 1 ALKANE NAMES (Memorize) (Sections 3.2) # C’s Name Formula Bp (ºC) Structure 1 Methane CH4 -162 H-(CH2)-H 2 Ethane C2H6 -89 H-(CH2)2-H 3 Propane C3H8 -42 H-(CH2)3-H 4 Butane C4H10 0 H-(CH2)4-H 5 Pentane C5H12 36 H-(CH2)5-H 6 Hexane C6H14 69 H-(CH2)6-H 7 Heptane C7H16 98 H-(CH2)7-H 8 Octane C8H18 126 H-(CH2)8-H 9 Nonane C9H20 151 H-(CH2)9-H 10 Octane C10H22 174 H-(CH2)10-H Industrial Alkanes (Sections 3.5) Name # C’s Boiling Range Use Natural Gas C1-C3 Gas Fuel (70% methane) “Petroleum Gas” C2-C4 <30º Heating, Gas Propane C3 -42º Propane tanks, camping, etc. Gasoline C4-C9 30-180º Car fuel Kerosene C8-C16 160-230º Jet fuel Diesel C10-C18 200-320º Truck fuel Heavy Oils C16-C30 300-450º Motor Oils High temp Paraffin Vacuum Asphalt Never Distills Coke Never Distills Chem 350 Jasperse Ch. 3 Handouts 2 Nomenclature of Alkanes (Sections 3.3) Systematic IUPAC Rules for Branched and Substituted Alkanes (Section 3.3B) 1. Longest continuous C-chain “core name” 2. Number core chain from an end nearest a substituent 3. Name substituents as “alkyl” groups: 4. Specify the location of substituents using numbers (hyphenate the #’s) • If >2 substituents, list alphabetically • Use di-, tri-, tetra- if the same substituent is repeated. (But ignore these in alphabetizing). Punctuation Notes: • Hyphenate numbers • Do not put a space between substituents and the core name Special Names for Some 3 or 4-carbon Substituents H3C CH3 CH Memorize H3C C H3C CH3 Isopropyl t-butyl or tert-butyl H2 H2 CH3 H3C C H3C C CH H3C CH Others C C C C CH3 H3C C H2 H H H2 2 2 H2 n-propyl n-butyl isobutyl s-butyl (n for "normal") Another Classification System Primary (1º): with one attached carbon Secondary (2º): with two attached carbons Tertiary (3º): with three attached carbons H C C C C C C C C H 1º H 2º C 3º Very Complex Substituents (Not responsible) Substituent: (1-ethyl-2,3-dimethylpentyl) Overall: 9-(1-ethyl-2,3-dimethylpentyl)nonadecane Chem 350 Jasperse Ch. -
Influence of Conjugation Axis on the Optical and Electronic Properties Of
Article pubs.acs.org/joc Influence of Conjugation Axis on the Optical and Electronic Properties of Aryl-Substituted Benzobisoxazoles † ‡ ‡ † † Brian C. Tlach, Aimeé L. Tomlinson, Alden G. Ryno, Dawn D. Knoble, Dana L. Drochner, † Kyle J. Krager, and Malika Jeffries-EL*, † Department of Chemistry, Iowa State University, Ames, Iowa 50010, United States ‡ Department of Chemistry, University of North Georgia, Dahlonega, Georgia 30597, United States *S Supporting Information ABSTRACT: Six different 2,6-diethyl-4,8-diarylbenzo[1,2-d:4,5-d′]bis(oxazoles) and four different 2,4,6,8-tetraarylbenzobisoxazoles were synthesized in two steps: a Lewis acid catalyzed orthoester cyclization followed by a Suzuki or Stille cross-coupling with various arenes. The influence of aryl group substitution and/or conjugation axis variation on the optical and electronic properties of these benzobis(oxazole) (BBO) compounds was evaluated. Structural modifications could be used to alter the HOMO, LUMO, and band gap over a range of 1.0, 0.5, and 0.5 eV, respectively. However, depending on the location and identity of the substituent, the HOMO level can be altered without significantly impacting the LUMO level. This is supported by the calculated frontier molecular orbitals. Our results indicate that the FMOs and band gaps of benzobisoxazoles can be readily modified either jointly or individually. ■ INTRODUCTION Among the aforementioned examples, the benzo[1,2-d:4,5- d′]bis(oxazole) (BBO)-based cruciforms are particularly During the past four decades, interest in the development of π- interesting, since these molecules have two different con- conjugated materials has increased due to their potential use as jugation pathways: 2,6-conjugation through the oxazole rings replacements for inorganic materials in a variety of semi- and 4,8-conjugation through the central benzene ring (Scheme conducting applications including field effect transistors − − 1). -
Chapter 9 Molecular Geometry and Bonding Theories
Secon 9.1 Hybridiza)on and the Localized Electron Model Chapter 9 Molecular Geometry and Bonding Theories Secon 9.1 Hybridiza)on and the Localized Electron Model VSEPR Model § VSEPR: Valence Shell Electron-Pair Repulsion. § The structure around a given atom is determined principally by minimizing electron pair repulsions. Copyright © Cengage Learning. All rights reserved 2 Secon 9.1 Hybridiza)on and the Localized Electron Model Steps to Apply the VSEPR Model 1. Draw the Lewis structure for the molecule. 2. Count the electron pairs and arrange them in the way that minimizes repulsion (put the pairs as far apart as possible. 3. Determine the posi$ons of the atoms from the way electron pairs are shared (how electrons are shared between the central atom and surrounding atoms). 4. Determine the name of the molecular structure from posi$ons of the atoms. Copyright © Cengage Learning. All rights reserved 3 Secon 9.1 Hybridiza)on and the Localized Electron Model Predict the geometry of the molecule from the electrostatic repulsions between the electron (bonding and nonbonding) pairs. # of atoms # lone bonded to pairs on Arrangement of Molecular Class central atom central atom electron pairs Geometry AB2 2 0 linear linear Copyright © Cengage Learning. All rights reserved Secon 9.1 Hybridiza)on and the Localized Electron Model # of atoms # lone bonded to pairs on Arrangement of Molecular Class central atom central atom electron pairs Geometry trigonal trigonal AB3 3 0 planar planar Copyright © Cengage Learning. All rights reserved Secon 9.1 Hybridiza)on and the Localized Electron Model # of atoms # lone bonded to pairs on Arrangement of Molecular Class central atom central atom electron pairs Geometry AB4 4 0 tetrahedral tetrahedral Copyright © Cengage Learning. -
AJR Ch10 Molecular Geometry.Docx Slide 1 Chapter 10 Molecular
Chapter 10 Molecular Geometry (Ch9 Jespersen, Ch10 Chang) The arrangement of the atoms of a molecule in space is the molecular geometry. This is what gives the molecules their shape. Molecular shape is only discussed when there are three or more atoms connected (diatomic shape is obvious). Molecular geometry is essentially based upon five basic geometrical structures, and can be predicted by the valence shell electron pair repulsion model (VSEPR). The VSEPR Method This method deals with electron domains, which are regions in which it is most likely to find the valence electrons. This includes the: -bonding pairs (located between two atoms, bonding domain), and -nonbonding pairs or lone pairs (located principally on one atom, nonbonding domain). (Note for bonding domains, they contain all the electrons shared between two atoms – so a multiple bond is considered as one domain). The best arrangement of a given number of electron domains (charge clouds) is the one that minimizes the repulsions among the different domains. The arrangement of electron domains about the central atom of a molecule is called its electron-domain geometry (or electronic geometry). AJR Ch10 Molecular Geometry.docx Slide 1 The five basic geometrical structures are linear, trigonal planar (planar triangular), tetrahedral, trigonal bipyramid and octahedral. Linear Trigonal Planar AJR Ch10 Molecular Geometry.docx Slide 2 Tetrahedral Trigonal Bipyramid AJR Ch10 Molecular Geometry.docx Slide 3 Octahedral The number and type of electron domains control the geometry; the number and type of electron domains is obtained from the Lewis structure. There are two general situations – either the central atom (which controls the geometry) has non-bonding electrons (lone pairs), or it does not. -
Physical Sciences Content
Foreword In order to improve learning outcomes the Department of Basic Education conducted research to determine the specific areas that learners struggle with in Grade 12 examinations. The research included a trend analysis by subject experts of learner performance over a period of five years as well as learner examination scripts in order to diagnose deficiencies or misconceptions in particular content areas. In addition, expert teachers were interviewed to determine the best practicesto ensure mastery of thetopic by learners and improve outcomes in terms of quality and quantity. The results of the research formed the foundation and guiding principles for the development of the booklets. In each identified subject, key content areas were identified for the development of material that will significantly improve learner's conceptual understanding whilst leading to improved performance in the subject. The booklets are developed as part of a series of booklets, with each bookletfocussing onlyon one specific challenging topic. The selected content is explained in detail and include relevant concepts from Grades 10 - 12 to ensure conceptual understanding. The main purpose of these booklets is to assist learners to master the content starting from a basic conceptual level of understanding to the more advanced level. The content in each booklets is presented in an easy to understand manner including the use of mind maps, summaries and exercises to support understanding and conceptual progression. These booklets should ideally be used as part of a focussed revision or enrichment program by learners after the topics have been taught in class. The booklets encourage learners to take ownership of their own learning and focus on developing and mastery critical content and skills such as reading and higher order thinking skills. -
Heuristics for Searching Chemical Structures a Thesis Presented To
Heuristics for Searching Chemical Structures A Thesis presented to the Faculty of the Graduate School University of Missouri-Columbia In Partial Fulfillment of the Requirements for the Degree Master of Science by Nandini Basu Dr. Toni Kazic, Thesis Supervisor May 2007 The undersigned, appointed by the Dean of the Graduate School, have examined the thesis entitled HEURISTICS FOR SEARCHING CHEMICAL STRUCTURES presented by Nandini Basu A candidate for the degree of Master of Science And hereby certify that in their opinion it is worthy of acceptance. Dr. Toni Kazic Dr. Chi-Ren Shyu Dr. Mary Schaeffer ACKNOWLEDGMENTS I am deeply indebted to my research advisor Dr. Toni Kazic for giving me an opportunity to resume my research in and complete my Computer Science MS program. Without her guidance, support and encouragement this would not have been possible. I would like to thank Dr. Mary Polaco and Dr. Shyu for serving in my committee and helping me in my thesis. I would like to thank the Klotho team for helping me with structures. And also the other team members Amith, Archana, Avanthi, Bill, Deepthi, Gaurav, Raman, Jiahui, Fatten, Meeta and Michael. My friends made a difficult journey lot of fun and much easier, especially Cathy, Charu, Deepak, Karan, Karthik, Paco, Nikunj, Raj, Shiva, Shraddha, Sundeep and Vibha. All my relatives gave me constant encouragement and I would like to take this opportunity to thank them. And above all, I would like to thank my father Prabhat Kumar Basu, my mother Minoti Basu, my brother Pradipta Kumar Basu and my sister-in-law Sarmistha Basu. -
Collisions Lesson Plan VSEPR Theory Time: 1 -2 Class Periods
Collisions Lesson Plan VSEPR Theory Time: 1 -2 class periods Lesson Description In this lesson, students will use Collisions to explore molecular geometry and VSEPR Theory. Key Essential Questions 1. What is the VSEPR Theory? 2. How does the number of electron domains & lone pairs of a central atom affect molecular shape? Learning Outcomes Students will be able to determine the shape of molecular compounds using VSEPR Theory. Prior Student Knowledge Expected Atoms can covalently bond together to form molecular compounds. Lesson Materials • Individual student access to Collisions on tablet, Chromebook, or computer. • Projector / display of teacher screen • Accompanying student resources (attached) Standards Alignment NGSS Alignment Science & Enginnering Practices Disciplinary Core Ideas Crosscutting Concepts • Developing and using • HS-PS-2. Construct and • Structure and Function models revise an explanation for the • Construcing explanations outcome of a simple chemical and designing solutions rection based on the outermost electron states of atoms, trends int he periodic table, and knowl- edge of the partterns of chemi- cal properties. www.playmadagames.com ©2018 PlayMada Games LLC. All rights reserved. 1 PART 1: Explore (15 minutes) This is an inquiry-driven activity where students will build molecules in the Covalent Bonding Sandbox to begin to explore VSEPR Theory and molecular geometry. Prior to starting this lesson, students should have already completed Levels 1 -7 in the Covalent Bonding Game. A student worksheet for this activity can be found on PAGE 5. Direct students to log into Collisions with their individual username and password, enter the Covalent Bonding Sandbox and follow the prompt below, Your goal is to build 3 unique molecules in the Covalent Bonding Sandbox.