Model Systems, Taxonomic Bias, and Sexual Selection: Beyond Drosophila
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DNA Barcodes Reveal Deeply Neglected Diversity and Numerous Invasions of Micromoths in Madagascar
Genome DNA barcodes reveal deeply neglected diversity and numerous invasions of micromoths in Madagascar Journal: Genome Manuscript ID gen-2018-0065.R2 Manuscript Type: Article Date Submitted by the 17-Jul-2018 Author: Complete List of Authors: Lopez-Vaamonde, Carlos; Institut National de la Recherche Agronomique (INRA), ; Institut de Recherche sur la Biologie de l’Insecte (IRBI), Sire, Lucas; Institut de Recherche sur la Biologie de l’Insecte Rasmussen,Draft Bruno; Institut de Recherche sur la Biologie de l’Insecte Rougerie, Rodolphe; Institut Systématique, Evolution, Biodiversité (ISYEB), Wieser, Christian; Landesmuseum für Kärnten Ahamadi, Allaoui; University of Antananarivo, Department Entomology Minet, Joël; Institut de Systematique Evolution Biodiversite deWaard, Jeremy; Biodiversity Institute of Ontario, University of Guelph, Decaëns, Thibaud; Centre d'Ecologie Fonctionnelle et Evolutive (CEFE UMR 5175, CNRS–Université de Montpellier–Université Paul-Valéry Montpellier–EPHE), , CEFE UMR 5175 CNRS Lees, David; Natural History Museum London Keyword: Africa, invasive alien species, Lepidoptera, Malaise trap, plant pests Is the invited manuscript for consideration in a Special 7th International Barcode of Life Issue? : https://mc06.manuscriptcentral.com/genome-pubs Page 1 of 57 Genome 1 DNA barcodes reveal deeply neglected diversity and numerous invasions of micromoths in 2 Madagascar 3 4 5 Carlos Lopez-Vaamonde1,2, Lucas Sire2, Bruno Rasmussen2, Rodolphe Rougerie3, 6 Christian Wieser4, Allaoui Ahamadi Allaoui 5, Joël Minet3, Jeremy R. deWaard6, Thibaud 7 Decaëns7, David C. Lees8 8 9 1 INRA, UR633, Zoologie Forestière, F- 45075 Orléans, France. 10 2 Institut de Recherche sur la Biologie de l’Insecte, UMR 7261 CNRS Université de Tours, UFR 11 Sciences et Techniques, Tours, France. -
The Evolution, Diversity, and Host Associations of Rhabdoviruses Ben Longdon,1,* Gemma G
Virus Evolution, 2015, 1(1): vev014 doi: 10.1093/ve/vev014 Research article The evolution, diversity, and host associations of rhabdoviruses Ben Longdon,1,* Gemma G. R. Murray,1 William J. Palmer,1 Jonathan P. Day,1 Darren J Parker,2,3 John J. Welch,1 Darren J. Obbard4 and Francis M. Jiggins1 1 2 Department of Genetics, University of Cambridge, Cambridge, CB2 3EH, School of Biology, University of Downloaded from St Andrews, St Andrews, KY19 9ST, UK, 3Department of Biological and Environmental Science, University of Jyva¨skyla¨, Jyva¨skyla¨, Finland and 4Institute of Evolutionary Biology, and Centre for Immunity Infection and Evolution, University of Edinburgh, Edinburgh, EH9 3JT, UK *Corresponding author: E-mail: [email protected] http://ve.oxfordjournals.org/ Abstract Metagenomic studies are leading to the discovery of a hidden diversity of RNA viruses. These new viruses are poorly characterized and new approaches are needed predict the host species these viruses pose a risk to. The rhabdoviruses are a diverse family of RNA viruses that includes important pathogens of humans, animals, and plants. We have discovered thirty-two new rhabdoviruses through a combination of our own RNA sequencing of insects and searching public sequence databases. Combining these with previously known sequences we reconstructed the phylogeny of 195 rhabdovirus by guest on December 14, 2015 sequences, and produced the most in depth analysis of the family to date. In most cases we know nothing about the biology of the viruses beyond the host they were identified from, but our dataset provides a powerful phylogenetic approach to predict which are vector-borne viruses and which are specific to vertebrates or arthropods. -
Terrestrial Insects and Climate Change: Adaptive Responses in Key Traits
Physiological Entomology (2019), DOI: 10.1111/phen.12282 Terrestrial insects and climate change: adaptive responses in key traits VANESSA KELLERMANN andBELINDA VAN HEERWAARDEN School of Biological Sciences, Monash University, Melbourne, Victoria, Australia Abstract. Understanding and predicting how adaptation will contribute to species’ resilience to climate change will be paramount to successfully managing biodiversity for conservation, agriculture, and human health-related purposes. Making predictions that capture how species will respond to climate change requires an understanding of how key traits and environmental drivers interact to shape fitness in a changing world. Current trait-based models suggest that low- to mid-latitude populations will be most at risk, although these models focus on upper thermal limits, which may not be the most important trait driving species’ distributions and fitness under climate change. In this review, we discuss how different traits (stress, fitness and phenology) might contribute and interact to shape insect responses to climate change. We examine the potential for adaptive genetic and plastic responses in these key traits and show that, although there is evidence of range shifts and trait changes, explicit consideration of what underpins these changes, be that genetic or plastic responses, is largely missing. Despite little empirical evidence for adaptive shifts, incorporating adaptation into models of climate change resilience is essential for predicting how species will respond under climate change. We are making some headway, although more data are needed, especially from taxonomic groups outside of Drosophila, and across diverse geographical regions. Climate change responses are likely to be complex, and such complexity will be difficult to capture in laboratory experiments. -
Open Access Author Fund Annual Report FY19
The KU Open Access Author Fund Annual Report (July 2018 - June 2019) The KU One University Open Access Author Fund (OAAF) had an active year receiving many applications and publishing more articles in open access journals for which the OAAF provided at least partial funding. The number of applications received remained stable for several years but declined slightly in FY19. However, competition for the awards has increased due to rising article processing charges making the criteria and point system even more important. All the articles paid for and published so far have been placed in the KU ScholarWorks institutional repository under “Open Access.” Included in this report are the statistics for FY 2019 in the following tables: Table 1. Numbers of applications and awards Table 2. Total amount spent and a break down by campus We’ve also included appendices covering the fund from Inception (Oct. 2012) through June 2019: Appendix A A Short History of the First Six Years of the Open Access Author Fund Appendix B Cumulative Statistics Appendix C Highlights of Article-Level Metrics for Selected Papers Funded by the OAAF Appendix D Full List of Published Papers Funded by the OAAF Appendix E Applications Received by Unit 1 KU Open Access Author Fund Annual Report, FY 19 Table 1. Statistics for FY 2019 When compared to the figures from the previous fiscal year (July 2017-June 2018), there was a 17% decrease in the number of applications received and therefore a smaller number of applications that were rejected. The number of awards that were offered and paid were similar. -
Selection on Morphological Traits and Fluctuating Asymmetry by a Fungal Parasite in the Yellow Dung Fly
bioRxiv preprint doi: https://doi.org/10.1101/136325; this version posted September 14, 2017. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-ND 4.0 International license. 1 2 3 4 5 6 7 Blanckenhorn WU. 2017. 8 Selection on morphological traits and fluctuating asymmetry by a 9 fungal parasite in the yellow dung fly. 10 bioRxiv 136325, http://dx.doi.org/10.1101/136325 11 12 A Preprint reviewed and recommended by Peer Community 13 Evolutionary Biology: 14 http://dx.doi.org/10.24072/pci.evolbiol.100027 15 16 17 bioRxiv preprint doi: https://doi.org/10.1101/136325; this version posted September 14, 2017. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-ND 4.0 International license. Wolf U. Blanckenhorn Selection by a fungal parasite in dung flies Selection on morphological traits and fluctuating asymmetry by a fungal parasite in the yellow dung fly WOLF U. BLANCKENHORN Department of Evolutionary Biology and Environmental Studies, University of Zürich, Winterthurerstrasse 190, CH-8057 Zürich, Switzerland; Fax: +41 44 635.4780; E-mail: [email protected] Abstract Evidence for selective disadvantages of large body size remains scarce in general. Previous phenomenological studies of the yellow dung fly Scathophaga stercoraria have demonstrated strong positive sexual and fecundity selection on male and female size. -
The Discovery, Distribution and Diversity of DNA Viruses Associated with Drosophila Melanogaster in Europe
bioRxiv preprint doi: https://doi.org/10.1101/2020.10.16.342956; this version posted March 17, 2021. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. Title: The discovery, distribution and diversity of DNA viruses associated with Drosophila melanogaster in Europe Running title: DNA viruses of European Drosophila Key Words: DNA virus, Endogenous viral element, Drosophila, Nudivirus, Galbut virus, Filamentous virus, Adintovirus, Densovirus, Bidnavirus Authors: Megan A. Wallace 1,2 [email protected] 0000-0001-5367-420X Kelsey A. Coffman 3 [email protected] 0000-0002-7609-6286 Clément Gilbert 1,4 [email protected] 0000-0002-2131-7467 Sanjana Ravindran 2 [email protected] 0000-0003-0996-0262 Gregory F. Albery 5 [email protected] 0000-0001-6260-2662 Jessica Abbott 1,6 [email protected] 0000-0002-8743-2089 Eliza Argyridou 1,7 [email protected] 0000-0002-6890-4642 Paola Bellosta 1,8,9 [email protected] 0000-0003-1913-5661 Andrea J. Betancourt 1,10 [email protected] 0000-0001-9351-1413 Hervé Colinet 1,11 [email protected] 0000-0002-8806-3107 Katarina Eric 1,12 [email protected] 0000-0002-3456-2576 Amanda Glaser-Schmitt 1,7 [email protected] 0000-0002-1322-1000 Sonja Grath 1,7 [email protected] 0000-0003-3621-736X Mihailo Jelic 1,13 [email protected] 0000-0002-1637-0933 Maaria Kankare 1,14 [email protected] 0000-0003-1541-9050 Iryna Kozeretska 1,15 [email protected] 0000-0002-6485-1408 Volker Loeschcke 1,16 [email protected] 0000-0003-1450-0754 Catherine Montchamp-Moreau 1,4 [email protected] 0000-0002-5044-9709 Lino Ometto 1,17 [email protected] 0000-0002-2679-625X Banu Sebnem Onder 1,18 [email protected] 0000-0002-3003-248X Dorcas J. -
Acoustic Communication in the Nocturnal Lepidoptera
Chapter 6 Acoustic Communication in the Nocturnal Lepidoptera Michael D. Greenfield Abstract Pair formation in moths typically involves pheromones, but some pyra- loid and noctuoid species use sound in mating communication. The signals are generally ultrasound, broadcast by males, and function in courtship. Long-range advertisement songs also occur which exhibit high convergence with commu- nication in other acoustic species such as orthopterans and anurans. Tympanal hearing with sensitivity to ultrasound in the context of bat avoidance behavior is widespread in the Lepidoptera, and phylogenetic inference indicates that such perception preceded the evolution of song. This sequence suggests that male song originated via the sensory bias mechanism, but the trajectory by which ances- tral defensive behavior in females—negative responses to bat echolocation sig- nals—may have evolved toward positive responses to male song remains unclear. Analyses of various species offer some insight to this improbable transition, and to the general process by which signals may evolve via the sensory bias mechanism. 6.1 Introduction The acoustic world of Lepidoptera remained for humans largely unknown, and this for good reason: It takes place mostly in the middle- to high-ultrasound fre- quency range, well beyond our sensitivity range. Thus, the discovery and detailed study of acoustically communicating moths came about only with the use of electronic instruments sensitive to these sound frequencies. Such equipment was invented following the 1930s, and instruments that could be readily applied in the field were only available since the 1980s. But the application of such equipment M. D. Greenfield (*) Institut de recherche sur la biologie de l’insecte (IRBI), CNRS UMR 7261, Parc de Grandmont, Université François Rabelais de Tours, 37200 Tours, France e-mail: [email protected] B. -
Repeatability of Sperm Size in Outbred and Inbred Scathophaga Stercoraria (Diptera: Scathophagidae)
Zurich Open Repository and Archive University of Zurich Main Library Strickhofstrasse 39 CH-8057 Zurich www.zora.uzh.ch Year: 2007 Repeatability of sperm size in outbred and inbred Scathophaga stercoraria (Diptera: Scathophagidae) Bernasconi, G ; Ward, P I ; Hellriegel, B Abstract: Variability in male gametic traits can depend on several genetic and environmental factors such as developmental instability as a consequence of inbreeding, developmental noise during spermatogenesis, or age- or condition-dependent changes in allocation to sperm cells. Variation in sperm size is particularly evident in species that produce more than one sperm morph but also occurs among males in sperm- monomorphic species. Both discrete and continuous sperm size variation have been implicated in male fertilization success when the sperm of several males directly compete for fertilization of the same set of ova. In this study, we investigated among-male variation in sperm length in field-collected, outbred male Scathophaga stercoraria (L.) flies, as well as in flies from the same natural population that hadbeen subjected to 15 and 16 generations of inbreeding under laboratory conditions. Among-male variation in sperm length was significant and repeatable over subsequent matings in both inbred and outbred flies. We conclude that sperm length can be used as an individual male marker in sperm competition studies and that significant repeatability of sperm length supports heritability for this trait DOI: https://doi.org/10.4039/n06-063 Posted at the Zurich Open Repository and Archive, University of Zurich ZORA URL: https://doi.org/10.5167/uzh-154393 Journal Article Published Version Originally published at: Bernasconi, G; Ward, P I; Hellriegel, B (2007). -
A Fungal Parasite Selects Against Body Size but Not Fluctuating Asymmetry in Swiss Subalpine Yellow Dung Flies
Alpine Entomology 5 2021, 27–35 | DOI 10.3897/alpento.5.65653 A fungal parasite selects against body size but not fluctuating asymmetry in Swiss subalpine yellow dung flies Wolf U. Blanckenhorn1 1 Department of Evolutionary Biology and Environmental Studies, University of Zürich, Winterthurerstrasse 190, CH-8057, Zürich, Switzerland http://zoobank.org/0D01A23B-D327-4F92-9726-93AAD929CAFD Corresponding author: Wolf U. Blanckenhorn ([email protected]) Academic editor: Patrick Rohner ♦ Received 8 March 2021 ♦ Accepted 25 May 2021 ♦ Published 11 June 2021 Abstract Evidence for selective disadvantages of large body size remains scarce in general. Previous studies of the yellow dung fly Scatho- phaga stercoraria have demonstrated strong positive sexual and fecundity selection on male and female size. Nevertheless, the body size of flies from a Swiss study population has declined by ~10% 1993–2009. Given substantial heritability of body size, this neg- ative evolutionary response of an evidently positively selected trait suggests important selective factors being missed. An episodic epidemic outbreak of the fungus Entomophthora scatophagae permitted assessment of natural selection exerted by this fatal parasite. Fungal infection varied over the season from ~50% in the cooler and more humid spring and autumn to almost 0% in summer. The probability of dying from fungal infection increased with adult fly body size. Females never laid any eggs after infection, so there was no fungus effect on female fecundity beyond its impact on mortality. Large males showed their typical mating advantage in the field, but this positive sexual selection was nullified by fungal infection. Mean fluctuating asymmetry of paired appendages (legs, wings) did not affect the viability, fecundity or mating success of yellow dung flies in the field. -
Biodiversity and Faunistic Studies of the Family Pyralidae
Pak. j. life soc. Sci. (2017), 15(2): 126-132 E-ISSN: 2221-7630;P-ISSN: 1727-4915 Pakistan Journal of Life and Social Sciences www.pjlss.edu.pk RESEARCH ARTICLE Biodiversity and Faunistic Studies of the Family Pyralidae (Lepidoptera) from Pothwar Region, Punjab, Pakistan Tazeel Ahmad 1, Zahid Mahmood Sarwar 2*, Mamoona Ijaz 2 , Muhammad Sajjad and Muhammad Bin yameen 2 1 Pir Mehr Ali Shah -Arid Agriculture University Rawalpindi 2 Department of Entomology, Bahauddin Zakariya University, Multan 60800, Pakistan ARTICLE INFO ABSTRACT Received: Jan 24, 2017 Snout moths (Lepidoptera: Pyralidae) are economic pests of agricultural crops and Accepted: Aug 18, 2017 forest plantations. To explore new species via taxonomic identification, 127 specimens of moths were collected from different areas of Pothwar region of Keywords Pakistan including Chakwal, Attock, Jhelum and Rawalpindi districts during 2009- Pothwar 2010. The characters of the specimens were identified at species level by using Pyralidae Hampson’s key and other taxonomic resources. All of these species new to Pyralid Snout Moths moth fauna of Pothwar region namely: Galleria mellonella Linnaeus., Achroia Taxonomic keys grisella Fabricius., Corcyra cephalonica Staint., Chilo simplex Butler., Scirpophaga auriflua Zeller., S. chrysorrhoa Zeller., Leucinodes orbonalis Guenee., Zinckenia fascialis Cramer and Cnaphalocrocis medinalis Guenee. are reported for the first time from Pothwar region. To understand the biodiversity of moths, distribution of the species were also studied for each district of Pothwar region. The distribution pattern of Corcyra cephalonica (42), Leucinodes orbonalis (18), Scirpophaga auriflua (10) and Scirpophaga chrysorrhoa (9), Chilo simplex (6), Zinckenia fascialis (7), Cnaphalocrocis medinalis (10), Galleria mellonella (24) and Achroia *Corresponding Author: grisella (1) was observed. -
THEODOSIUS DOBZHANSKY January 25, 1900-December 18, 1975
NATIONAL ACADEMY OF SCIENCES T H E O D O S I U S D O B ZHANSKY 1900—1975 A Biographical Memoir by F R A N C I S C O J . A Y A L A Any opinions expressed in this memoir are those of the author(s) and do not necessarily reflect the views of the National Academy of Sciences. Biographical Memoir COPYRIGHT 1985 NATIONAL ACADEMY OF SCIENCES WASHINGTON D.C. THEODOSIUS DOBZHANSKY January 25, 1900-December 18, 1975 BY FRANCISCO J. AYALA HEODOSIUS DOBZHANSKY was born on January 25, 1900 Tin Nemirov, a small town 200 kilometers southeast of Kiev in the Ukraine. He was the only child of Sophia Voinarsky and Grigory Dobrzhansky (precise transliteration of the Russian family name includes the letter "r"), a teacher of high school mathematics. In 1910 the family moved to the outskirts of Kiev, where Dobzhansky lived through the tumultuous years of World War I and the Bolshevik revolu- tion. These were years when the family was at times beset by various privations, including hunger. In his unpublished autobiographical Reminiscences for the Oral History Project of Columbia University, Dobzhansky states that his decision to become a biologist was made around 1912. Through his early high school (Gymnasium) years, Dobzhansky became an avid butterfly collector. A schoolteacher gave him access to a microscope that Dob- zhansky used, particularly during the long winter months. In the winter of 1915—1916, he met Victor Luchnik, a twenty- five-year-old college dropout, who was a dedicated entomol- ogist specializing in Coccinellidae beetles. -
The Evolution of Sex-Biased Gene Expression in Drosophila Serrata
The evolution of sex-biased gene expression in Drosophila serrata Scott Lee Allen B.Sc. Hons (2008) A thesis submitted for the degree of Doctor of Philosophy at The University of Queensland in 2017 School of Biological Sciences Abstract Sexual reproduction is an ancient biological process and in most species, has resulted in the evolution of two distinct sexes; females that are typically categorised as producing relatively large and metabolically costly gametes, and males that produce smaller less costly gametes. Such differences between the sexes can result in discordant selection pressures where, for example, males are selected for a fast mating rate, whereas it is beneficial for females to reproduce less often. Because the sexes share a genome, such discordant selection can create an intralocus sexual conflict, where an allele can be simultaneously beneficial in one sex while being detrimental in the other. Ultimately, the resolution of intralocus sexual conflict occurs via the evolution of sexual dimorphism, which allows each sex to approach its individual fitness optimum. A prime mechanism for the evolution of sexual dimorphism is sex-biased gene expression, where males and females express the shared genome differently to produce distinct phenotypes. Sex-biased gene expression (SBGE) appears to be a common feature of dioecious species and during my PhD candidature, I studied the following aspects of the evolution of SBGE in the Australian vinegar fly Drosophila serrata. 1) A deficit of male-biased X-linked genes has been observed in several other species. I assessed the possibility that such a nonrandom distribution of sex-biased genes in D.