Higher Order Learning with Graphs
Total Page:16
File Type:pdf, Size:1020Kb
Load more
Recommended publications
-
Practical Parallel Hypergraph Algorithms
Practical Parallel Hypergraph Algorithms Julian Shun [email protected] MIT CSAIL Abstract v While there has been signicant work on parallel graph pro- 0 cessing, there has been very surprisingly little work on high- e0 performance hypergraph processing. This paper presents v0 v1 v1 a collection of ecient parallel algorithms for hypergraph processing, including algorithms for betweenness central- e1 ity, maximal independent set, k-core decomposition, hyper- v2 trees, hyperpaths, connected components, PageRank, and v2 v3 e single-source shortest paths. For these problems, we either 2 provide new parallel algorithms or more ecient implemen- v3 tations than prior work. Furthermore, our algorithms are theoretically-ecient in terms of work and depth. To imple- (a) Hypergraph (b) Bipartite representation ment our algorithms, we extend the Ligra graph processing Figure 1. An example hypergraph representing the groups framework to support hypergraphs, and our implementa- , , , , , , and , , and its bipartite repre- { 0 1 2} { 1 2 3} { 0 3} tions benet from graph optimizations including switching sentation. between sparse and dense traversals based on the frontier size, edge-aware parallelization, using buckets to prioritize processing of vertices, and compression. Our experiments represented as hyperedges, can contain an arbitrary number on a 72-core machine and show that our algorithms obtain of vertices. Hyperedges correspond to group relationships excellent parallel speedups, and are signicantly faster than among vertices (e.g., a community in a social network). An algorithms in existing hypergraph processing frameworks. example of a hypergraph is shown in Figure 1a. CCS Concepts • Computing methodologies → Paral- Hypergraphs have been shown to enable richer analy- lel algorithms; Shared memory algorithms. -
Three Conjectures in Extremal Spectral Graph Theory
Three conjectures in extremal spectral graph theory Michael Tait and Josh Tobin June 6, 2016 Abstract We prove three conjectures regarding the maximization of spectral invariants over certain families of graphs. Our most difficult result is that the join of P2 and Pn−2 is the unique graph of maximum spectral radius over all planar graphs. This was conjectured by Boots and Royle in 1991 and independently by Cao and Vince in 1993. Similarly, we prove a conjecture of Cvetkovi´cand Rowlinson from 1990 stating that the unique outerplanar graph of maximum spectral radius is the join of a vertex and Pn−1. Finally, we prove a conjecture of Aouchiche et al from 2008 stating that a pineapple graph is the unique connected graph maximizing the spectral radius minus the average degree. To prove our theorems, we use the leading eigenvector of a purported extremal graph to deduce structural properties about that graph. Using this setup, we give short proofs of several old results: Mantel's Theorem, Stanley's edge bound and extensions, the K}ovari-S´os-Tur´anTheorem applied to ex (n; K2;t), and a partial solution to an old problem of Erd}oson making a triangle-free graph bipartite. 1 Introduction Questions in extremal graph theory ask to maximize or minimize a graph invariant over a fixed family of graphs. Perhaps the most well-studied problems in this area are Tur´an-type problems, which ask to maximize the number of edges in a graph which does not contain fixed forbidden subgraphs. Over a century old, a quintessential example of this kind of result is Mantel's theorem, which states that Kdn=2e;bn=2c is the unique graph maximizing the number of edges over all triangle-free graphs. -
Manifold Learning
MANIFOLD LEARNING Kavé Salamatian- LISTIC Learning Machine Learning: develop algorithms to automatically extract ”patterns” or ”regularities” from data (generalization) Typical tasks Clustering: Find groups of similar points Dimensionality reduction: Project points in a lower dimensional space while preserving structure Semi-supervised: Given labelled and unlabelled points, build a labelling function Supervised: Given labelled points, build a labelling function All these tasks are not well-defined Clustering Identify the two groups Dimensionality Reduction 4096 Objects in R ? But only 3 parameters: 2 angles and 1 for illumination. They span a 3- dimensional sub-manifold of R4096! Semi-Supervised Learning Assign labels to black points Supervised learning Build a function that predicts the label of all points in the space Formal definitions Clustering: Given build a function Dimensionality reduction: Given build a function Semi-supervised: Given and with m << n, build a function Supervised: Given , build Geometric learning Consider and exploit the geometric structure of the data Clustering: two ”close” points should be in the same cluster Dimensionality reduction: ”closeness” should be preserved Semi-supervised/supervised: two ”close” points should have the same label Examples: k-means clustering, k-nearest neighbors. Manifold ? A manifold is a topological space that is locally Euclidian Around every point, there is a neighborhood that is topologically isomorph to unit ball Regularization Adopt a functional viewpoint -
Contemporary Spectral Graph Theory
CONTEMPORARY SPECTRAL GRAPH THEORY GUEST EDITORS Maurizio Brunetti, University of Naples Federico II, Italy, [email protected] Raffaella Mulas, The Alan Turing Institute, UK, [email protected] Lucas Rusnak, Texas State University, USA, [email protected] Zoran Stanić, University of Belgrade, Serbia, [email protected] DESCRIPTION Spectral graph theory is a striking theory that studies the properties of a graph in relationship to the characteristic polynomial, eigenvalues and eigenvectors of matrices associated with the graph, such as the adjacency matrix, the Laplacian matrix, the signless Laplacian matrix or the distance matrix. This theory emerged in the 1950s and 1960s. Over the decades it has considered not only simple undirected graphs but also their generalizations such as multigraphs, directed graphs, weighted graphs or hypergraphs. In the recent years, spectra of signed graphs and gain graphs have attracted a great deal of attention. Besides graph theoretic research, another major source is the research in a wide branch of applications in chemistry, physics, biology, electrical engineering, social sciences, computer sciences, information theory and other disciplines. This thematic special issue is devoted to the publication of original contributions focusing on the spectra of graphs or their generalizations, along with the most recent applications. Contributions to the Special Issue may address (but are not limited) to the following aspects: f relations between spectra of graphs (or their generalizations) and their structural properties in the most general shape, f bounds for particular eigenvalues, f spectra of particular types of graph, f relations with block designs, f particular eigenvalues of graphs, f cospectrality of graphs, f graph products and their eigenvalues, f graphs with a comparatively small number of eigenvalues, f graphs with particular spectral properties, f applications, f characteristic polynomials. -
Learning on Hypergraphs: Spectral Theory and Clustering
Learning on Hypergraphs: Spectral Theory and Clustering Pan Li, Olgica Milenkovic Coordinated Science Laboratory University of Illinois at Urbana-Champaign March 12, 2019 Learning on Graphs Graphs are indispensable mathematical data models capturing pairwise interactions: k-nn network social network publication network Important learning on graphs problems: clustering (community detection), semi-supervised/active learning, representation learning (graph embedding) etc. Beyond Pairwise Relations A graph models pairwise relations. Recent work has shown that high-order relations can be significantly more informative: Examples include: Understanding the organization of networks (Benson, Gleich and Leskovec'16) Determining the topological connectivity between data points (Zhou, Huang, Sch}olkopf'07). Graphs with high-order relations can be modeled as hypergraphs (formally defined later). Meta-graphs, meta-paths in heterogeneous information networks. Algorithmic methods for analyzing high-order relations and learning problems are still under development. Beyond Pairwise Relations Functional units in social and biological networks. High-order network motifs: Motif (Benson’16) Microfauna Pelagic fishes Crabs & Benthic fishes Macroinvertebrates Algorithmic methods for analyzing high-order relations and learning problems are still under development. Beyond Pairwise Relations Functional units in social and biological networks. Meta-graphs, meta-paths in heterogeneous information networks. (Zhou, Yu, Han'11) Beyond Pairwise Relations Functional units in social and biological networks. Meta-graphs, meta-paths in heterogeneous information networks. Algorithmic methods for analyzing high-order relations and learning problems are still under development. Review of Graph Clustering: Notation and Terminology Graph Clustering Task: Cluster the vertices that are \densely" connected by edges. Graph Partitioning and Conductance A (weighted) graph G = (V ; E; w): for e 2 E, we is the weight. -
Multilevel Hypergraph Partitioning with Vertex Weights Revisited
Multilevel Hypergraph Partitioning with Vertex Weights Revisited Tobias Heuer ! Karlsruhe Institute of Technology, Karlsruhe, Germany Nikolai Maas ! Karlsruhe Institute of Technology, Karlsruhe, Germany Sebastian Schlag ! Karlsruhe Institute of Technology, Karlsruhe, Germany Abstract The balanced hypergraph partitioning problem (HGP) is to partition the vertex set of a hypergraph into k disjoint blocks of bounded weight, while minimizing an objective function defined on the hyperedges. Whereas real-world applications often use vertex and edge weights to accurately model the underlying problem, the HGP research community commonly works with unweighted instances. In this paper, we argue that, in the presence of vertex weights, current balance constraint definitions either yield infeasible partitioning problems or allow unnecessarily large imbalances and propose a new definition that overcomes these problems. We show that state-of-the-art hypergraph partitioners often struggle considerably with weighted instances and tight balance constraints (even with our new balance definition). Thus, we present a recursive-bipartitioning technique that isable to reliably compute balanced (and hence feasible) solutions. The proposed method balances the partition by pre-assigning a small subset of the heaviest vertices to the two blocks of each bipartition (using an algorithm originally developed for the job scheduling problem) and optimizes the actual partitioning objective on the remaining vertices. We integrate our algorithm into the multilevel hypergraph -
On Decomposing a Hypergraph Into K Connected Sub-Hypergraphs
Egervary´ Research Group on Combinatorial Optimization Technical reportS TR-2001-02. Published by the Egrerv´aryResearch Group, P´azm´any P. s´et´any 1/C, H{1117, Budapest, Hungary. Web site: www.cs.elte.hu/egres . ISSN 1587{4451. On decomposing a hypergraph into k connected sub-hypergraphs Andr´asFrank, Tam´asKir´aly,and Matthias Kriesell February 2001 Revised July 2001 EGRES Technical Report No. 2001-02 1 On decomposing a hypergraph into k connected sub-hypergraphs Andr´asFrank?, Tam´asKir´aly??, and Matthias Kriesell??? Abstract By applying the matroid partition theorem of J. Edmonds [1] to a hyper- graphic generalization of graphic matroids, due to M. Lorea [3], we obtain a gen- eralization of Tutte's disjoint trees theorem for hypergraphs. As a corollary, we prove for positive integers k and q that every (kq)-edge-connected hypergraph of rank q can be decomposed into k connected sub-hypergraphs, a well-known result for q = 2. Another by-product is a connectivity-type sufficient condition for the existence of k edge-disjoint Steiner trees in a bipartite graph. Keywords: Hypergraph; Matroid; Steiner tree 1 Introduction An undirected graph G = (V; E) is called connected if there is an edge connecting X and V X for every nonempty, proper subset X of V . Connectivity of a graph is equivalent− to the existence of a spanning tree. As a connected graph on t nodes contains at least t 1 edges, one has the following alternative characterization of connectivity. − Proposition 1.1. A graph G = (V; E) is connected if and only if the number of edges connecting distinct classes of is at least t 1 for every partition := V1;V2;:::;Vt of V into non-empty subsets.P − P f g ?Department of Operations Research, E¨otv¨osUniversity, Kecskem´etiu. -
Hypergraph Packing and Sparse Bipartite Ramsey Numbers
Hypergraph packing and sparse bipartite Ramsey numbers David Conlon ∗ Abstract We prove that there exists a constant c such that, for any integer ∆, the Ramsey number of a bipartite graph on n vertices with maximum degree ∆ is less than 2c∆n. A probabilistic argument due to Graham, R¨odland Ruci´nskiimplies that this result is essentially sharp, up to the constant c in the exponent. Our proof hinges upon a quantitative form of a hypergraph packing result of R¨odl,Ruci´nskiand Taraz. 1 Introduction For a graph G, the Ramsey number r(G) is defined to be the smallest natural number n such that, in any two-colouring of the edges of Kn, there exists a monochromatic copy of G. That these numbers exist was proven by Ramsey [19] and rediscovered independently by Erd}osand Szekeres [10]. Whereas the original focus was on finding the Ramsey numbers of complete graphs, in which case it is known that t t p2 r(Kt) 4 ; ≤ ≤ the field has broadened considerably over the years. One of the most famous results in the area to date is the theorem, due to Chvat´al,R¨odl,Szemer´ediand Trotter [7], that if a graph G, on n vertices, has maximum degree ∆, then r(G) c(∆)n; ≤ where c(∆) is just some appropriate constant depending only on ∆. Their proof makes use of the regularity lemma and because of this the bound it gives on the constant c(∆) is (and is necessarily [11]) very bad. The situation was improved somewhat by Eaton [8], who proved, by using a variant of the regularity lemma, that the function c(∆) may be taken to be of the form 22c∆ . -
Hypernetwork Science: from Multidimensional Networks to Computational Topology∗
Hypernetwork Science: From Multidimensional Networks to Computational Topology∗ Cliff A. Joslyn,y Sinan Aksoy,z Tiffany J. Callahan,x Lawrence E. Hunter,x Brett Jefferson,z Brenda Praggastis,y Emilie A.H. Purvine,y Ignacio J. Tripodix March, 2020 Abstract cations, and physical infrastructure often afford a rep- resentation as such a set of entities with binary rela- As data structures and mathematical objects used tionships, and hence may be analyzed utilizing graph for complex systems modeling, hypergraphs sit nicely theoretical methods. poised between on the one hand the world of net- Graph models benefit from simplicity and a degree of work models, and on the other that of higher-order universality. But as abstract mathematical objects, mathematical abstractions from algebra, lattice the- graphs are limited to representing pairwise relation- ory, and topology. They are able to represent com- ships between entities, while real-world phenomena plex systems interactions more faithfully than graphs in these systems can be rich in multi-way relation- and networks, while also being some of the simplest ships involving interactions among more than two classes of systems representing topological structures entities, dependencies between more than two vari- as collections of multidimensional objects connected ables, or properties of collections of more than two in a particular pattern. In this paper we discuss objects. Representing group interactions is not possi- the role of (undirected) hypergraphs in the science ble in graphs natively, but rather requires either more of complex networks, and provide a mathematical complex mathematical objects, or coding schemes like overview of the core concepts needed for hypernet- “reification” or semantic labeling in bipartite graphs. -
Spectral Geometry for Structural Pattern Recognition
Spectral Geometry for Structural Pattern Recognition HEWAYDA EL GHAWALBY Ph.D. Thesis This thesis is submitted in partial fulfilment of the requirements for the degree of Doctor of Philosophy. Department of Computer Science United Kingdom May 2011 Abstract Graphs are used pervasively in computer science as representations of data with a network or relational structure, where the graph structure provides a flexible representation such that there is no fixed dimensionality for objects. However, the analysis of data in this form has proved an elusive problem; for instance, it suffers from the robustness to structural noise. One way to circumvent this problem is to embed the nodes of a graph in a vector space and to study the properties of the point distribution that results from the embedding. This is a problem that arises in a number of areas including manifold learning theory and graph-drawing. In this thesis, our first contribution is to investigate the heat kernel embed- ding as a route to computing geometric characterisations of graphs. The reason for turning to the heat kernel is that it encapsulates information concerning the distribution of path lengths and hence node affinities on the graph. The heat ker- nel of the graph is found by exponentiating the Laplacian eigensystem over time. The matrix of embedding co-ordinates for the nodes of the graph is obtained by performing a Young-Householder decomposition on the heat kernel. Once the embedding of its nodes is to hand we proceed to characterise a graph in a geometric manner. With the embeddings to hand, we establish a graph character- ization based on differential geometry by computing sets of curvatures associated ii Abstract iii with the graph nodes, edges and triangular faces. -
CS 598: Spectral Graph Theory. Lecture 10
CS 598: Spectral Graph Theory. Lecture 13 Expander Codes Alexandra Kolla Today Graph approximations, part 2. Bipartite expanders as approximations of the bipartite complete graph Quasi-random properties of bipartite expanders, expander mixing lemma Building expander codes Encoding, minimum distance, decoding Expander Graph Refresher We defined expander graphs to be d- regular graphs whose adjacency matrix eigenvalues satisfy |훼푖| ≤ 휖푑 for i>1, and some small 휖. We saw that such graphs are very good approximations of the complete graph. Expanders as Approximations of the Complete Graph Refresher Let G be a d-regular graph whose adjacency eigenvalues satisfy |훼푖| ≤ 휖푑. As its Laplacian eigenvalues satisfy 휆푖 = 푑 − 훼푖, all non-zero eigenvalues are between (1 − ϵ)d and 1 + ϵ 푑. 푇 푇 Let H=(d/n)Kn, 푠표 푥 퐿퐻푥 = 푑푥 푥 We showed that G is an ϵ − approximation of H 푇 푇 푇 1 − ϵ 푥 퐿퐻푥 ≼ 푥 퐿퐺푥 ≼ 1 + ϵ 푥 퐿퐻푥 Bipartite Expander Graphs Define them as d-regular good approximations of (some multiple of) the complete bipartite 푑 graph H= 퐾 : 푛 푛,푛 푇 푇 푇 1 − ϵ 푥 퐿퐻푥 ≼ 푥 퐿퐺푥 ≼ 1 + ϵ 푥 퐿퐻푥 ⇒ 1 − ϵ 퐻 ≼ 퐺 ≼ 1 + ϵ 퐻 G 퐾푛,푛 U V U V The Spectrum of Bipartite Expanders 푑 Eigenvalues of Laplacian of H= 퐾 are 푛 푛,푛 휆1 = 0, 휆2푛 = 2푑, 휆푖 = 푑, 0 < 푖 < 2푛 푇 푇 푇 1 − ϵ 푥 퐿퐻푥 ≼ 푥 퐿퐺푥 ≼ 1 + ϵ 푥 퐿퐻푥 Says we want d-regular graph G that has evals 휆1 = 0, 휆2푛 = 2푑, 휆푖 ∈ ( 1 − 휖 푑, 1 + 휖 푑), 0 < 푖 < 2푛 Construction of Bipartite Expanders Definition (Double Cover). -
Notes on Elementary Spectral Graph Theory Applications to Graph Clustering Using Normalized Cuts
University of Pennsylvania ScholarlyCommons Technical Reports (CIS) Department of Computer & Information Science 1-1-2013 Notes on Elementary Spectral Graph Theory Applications to Graph Clustering Using Normalized Cuts Jean H. Gallier University of Pennsylvania, [email protected] Follow this and additional works at: https://repository.upenn.edu/cis_reports Part of the Computer Engineering Commons, and the Computer Sciences Commons Recommended Citation Jean H. Gallier, "Notes on Elementary Spectral Graph Theory Applications to Graph Clustering Using Normalized Cuts", . January 2013. University of Pennsylvania Department of Computer and Information Science Technical Report No. MS-CIS-13-09. This paper is posted at ScholarlyCommons. https://repository.upenn.edu/cis_reports/986 For more information, please contact [email protected]. Notes on Elementary Spectral Graph Theory Applications to Graph Clustering Using Normalized Cuts Abstract These are notes on the method of normalized graph cuts and its applications to graph clustering. I provide a fairly thorough treatment of this deeply original method due to Shi and Malik, including complete proofs. I include the necessary background on graphs and graph Laplacians. I then explain in detail how the eigenvectors of the graph Laplacian can be used to draw a graph. This is an attractive application of graph Laplacians. The main thrust of this paper is the method of normalized cuts. I give a detailed account for K = 2 clusters, and also for K > 2 clusters, based on the work of Yu and Shi. Three points that do not appear to have been clearly articulated before are elaborated: 1. The solutions of the main optimization problem should be viewed as tuples in the K-fold cartesian product of projective space RP^{N-1}.