How Density Affects the Ovigerous Rate of the Cyclopoid Copepod Apocyclops Royi
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The Effects of Density Gradients on the Distribution and Behavior of Copepods" (2018)
University of San Diego Digital USD Theses Theses and Dissertations Summer 8-31-2018 The ffecE ts of Density Gradients on the Distribution and Behavior of Copepods Connor Cayson University of San Diego Follow this and additional works at: https://digital.sandiego.edu/theses Part of the Marine Biology Commons, and the Oceanography Commons Digital USD Citation Cayson, Connor, "The Effects of Density Gradients on the Distribution and Behavior of Copepods" (2018). Theses. 33. https://digital.sandiego.edu/theses/33 This Thesis is brought to you for free and open access by the Theses and Dissertations at Digital USD. It has been accepted for inclusion in Theses by an authorized administrator of Digital USD. For more information, please contact [email protected]. UNIVERSITY OF SAN DIEGO San Diego The Effects of Density Gradients on the Distribution and Behavior of Copepods A thesis submitted in partial satisfaction of the requirements for the degree of Master of Science in Marine Science By Connor Payne Cayson Thesis Committee Jennifer Prairie, Ph.D., Chair Nathalie Reyns, Ph.D. Moira Décima, Ph.D. 2018 i The thesis of Connor Payne Cayson is approved by: _______________________________________________ Jennifer C. Prairie, Ph.D., Thesis Committee Chair University of San Diego _______________________________________________ Nathalie Reyns, Ph.D., Thesis Committee Member University of San Diego _______________________________________________ Moira Décima, Ph.D., Thesis Committee Member National Institute of Water and Atmospheric Research, Wellington, New Zealand University of San Diego San Diego 2018 ii Copyright © 2018 Connor Payne Cayson All Rights Reserved iii ACKNOWLEDGEMENTS First, I must thank my advisor, teacher, and committee chair, Dr. -
Sub-Regional Report On
EP United Nations Environment UNEP(DEPI)/MED WG 359/Inf.10 Programme October 2010 ENGLISH ORIGINAL: ENGLISH MEDITERRANEAN ACTION PLAN Tenth Meeting of Focal Points for SPAs Marseille, France 17-20 May 2011 Sub-regional report on the “Identification of important ecosystem properties and assessment of ecological status and pressures to the Mediterranean marine and coastal biodiversity in the Adriatic Sea” PNUE CAR/ASP - Tunis, 2011 Note : The designations employed and the presentation of the material in this document do not imply the expression of any opinion whatsoever on the part of UNEP concerning the legal status of any State, Territory, city or area, or of its authorities, or concerning the delimitation of their frontiers or boundaries. © 2011 United Nations Environment Programme 2011 Mediterranean Action Plan Regional Activity Centre for Specially Protected Areas (RAC/SPA) Boulevard du leader Yasser Arafat B.P.337 – 1080 Tunis Cedex E-mail : [email protected] The original version (English) of this document has been prepared for the Regional Activity Centre for Specially Protected Areas by: Bayram ÖZTÜRK , RAC/SPA International consultant With the participation of: Daniel Cebrian. SAP BIO Programme officer (overall co-ordination and review) Atef Limam. RAC/SPA International consultant (overall co-ordination and review) Zamir Dedej, Pellumb Abeshi, Nehat Dragoti (Albania) Branko Vujicak, Tarik Kuposovic (Bosnia ad Herzegovina) Jasminka Radovic, Ivna Vuksic (Croatia) Lovrenc Lipej, Borut Mavric, Robert Turk (Slovenia) CONTENTS INTRODUCTORY NOTE ............................................................................................ 1 METHODOLOGY ....................................................................................................... 2 1. CONTEXT ..................................................... ERREUR ! SIGNET NON DÉFINI.4 2. SCIENTIFIC KNOWLEDGE AND AVAILABLE INFORMATION........................ 6 2.1. REFERENCE DOCUMENTS AND AVAILABLE INFORMATION ...................................... 6 2.2. -
On the Origin of Misophrioid Copepods from Anchialine
JanH. Stock Memorial Issue ONTHEORIGIN OF MISOPHRIOID COPEPODS FROM ANCHIALINE CAVES BY GEOFF A.BOXSHALL 1) and DAMIAÁ JAUME2 ) 1)TheNatural History Museum, Cromwell Road, London SW7 5BD,U.K. 2 )InstitutoMediterr aneo de Estudios A vanzados(CSIC-UIB), Ctra. V alldemossa,km 7 0 5, E-07071Palma de Mallorca, Spain ABSTRACT Phylogeneticrelationships between the known genera of the order Misophrioida permit the identi®cation of two lineages: one consisting of the family Misophriidae Brady, 1878 which comprisesseven genera, and a new,monotypicfamily, the Palpophriidae Boxshall & Jaume,1999; theother consisting of anothernew family, the Speleophriidae Boxshall & Jaume,1999, comprising eightgenera. Habitat exploitation by these families is discussed: members of the Misophriidae are primarilyhyperbenthic, those of thePalpophriidae and Speleophriidae are primarily cavernicolous inanchialinehabitats. The occurrence of misophriids in littoraland submarine caves is interpreted asevidence of a relativelyrecent landward extension of the habitat range in this family, from ashallow-waterhyperbenthic ancestor. The distribution of speleophriids in anchialine caves is interpretedas resulting from a colonizationepisode prior to the closure of the Tethys Sea. The analysisalso indicates that deep-water forms may represent a secondarycolonization rather than anindication of deep-water ancestry for the entire order. RESUMEN El estudiode las relaciones ® logeneticas entre los distintos g eneros pertenecientes al orden Misophrioidaha permitido la identi®caci on dedos linajes principales: uno compuesto por la familia MisophriidaeBrady, 1878, integrada por siete g eneros, y unafamilia nueva, Palpophriidae Boxshall &Jaume,1999; el otro, integrado por otra nueva familia, Speleophriidae Boxshall & Jaume,1999, compuestapor ocho g eneros. Se discutela explotaci on que del habitat hacen estas familias: los Misophriidaeson primariamente hiperb enticos, mientras que Palpophriidae y Speleophriidaeson cavernõÂcolasen medio anquialino. -
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A STUDY OF THE ECOLOGICAL RELATIONSHIPS AND TAXONOMIC STATUS OF TWO SPECIES OF THE GENUS CALANUS (CRUSTACEA: COPEPODA) by CHARLES D. WOODHOUSE, JR. B.A., University of California in Santa Barbara, 1962 M.A., University of Oregon, 1964 A THESIS SUBMITTED IN PARTIAL FULFILLMENT OF THE REQUIREMENTS FOR THE DEGREE OF DOCTOR OF PHILOSOPHY in the Department of ZOOLOGY accept this thesis as conforming to the required standard THE UNIVERSITY OF BRITISH COLUMBIA April, 1971 In presenting this thesis in partial fulfilment of the requirements for an advanced degree at the University of British Columbia, I agree that the Library shall make it freely available for reference and study. I further agree that permission for extensive copying of this thesis for scholarly purposes may be granted by the Head of my Department or by his representatives. It is understood that copying or publication of this thesis for financial gain shall not be allowed without my written permission. Department The University of British Columbia Vancouver 8, Canada Date /^"^tP/y/. This thesis presents the results of an investigation on the relationships between populations of closely related animals un• der apparent sympatric conditions. The mechanisms found have particular application toward understanding the species problem among members of the free-swimming marine copepod genus Calanus that possess a toothed inner surface on the coxopodites of the fifth pair of swirnming legs. The investigation describes the morphology, distribution, and general ecology of two forms of toothed Calanus from the far eastern North Pacific Ocean. Morphological differences were es• tablished and used to distinguish both forms on the oasis of length, shape of the anterior surface of the cephalothorax, proportionate differences in segments of the urosome and fifth swimming legs, and by the degree of asymmetry in the fifth pair of swimming legs of males. -
Molecular Species Delimitation and Biogeography of Canadian Marine Planktonic Crustaceans
Molecular Species Delimitation and Biogeography of Canadian Marine Planktonic Crustaceans by Robert George Young A Thesis presented to The University of Guelph In partial fulfilment of requirements for the degree of Doctor of Philosophy in Integrative Biology Guelph, Ontario, Canada © Robert George Young, March, 2016 ABSTRACT MOLECULAR SPECIES DELIMITATION AND BIOGEOGRAPHY OF CANADIAN MARINE PLANKTONIC CRUSTACEANS Robert George Young Advisors: University of Guelph, 2016 Dr. Sarah Adamowicz Dr. Cathryn Abbott Zooplankton are a major component of the marine environment in both diversity and biomass and are a crucial source of nutrients for organisms at higher trophic levels. Unfortunately, marine zooplankton biodiversity is not well known because of difficult morphological identifications and lack of taxonomic experts for many groups. In addition, the large taxonomic diversity present in plankton and low sampling coverage pose challenges in obtaining a better understanding of true zooplankton diversity. Molecular identification tools, like DNA barcoding, have been successfully used to identify marine planktonic specimens to a species. However, the behaviour of methods for specimen identification and species delimitation remain untested for taxonomically diverse and widely-distributed marine zooplanktonic groups. Using Canadian marine planktonic crustacean collections, I generated a multi-gene data set including COI-5P and 18S-V4 molecular markers of morphologically-identified Copepoda and Thecostraca (Multicrustacea: Hexanauplia) species. I used this data set to assess generalities in the genetic divergence patterns and to determine if a barcode gap exists separating interspecific and intraspecific molecular divergences, which can reliably delimit specimens into species. I then used this information to evaluate the North Pacific, Arctic, and North Atlantic biogeography of marine Calanoida (Hexanauplia: Copepoda) plankton. -
Ecdysteroids in the Oceanic Copepod Calanus Pacificus: Variation During Molt Cycle and Change Associated with Diapause
M 4648 MARINE ECOLOGY PROGRESS SERIES Vol. 257: 159–165, 2003 Published August 7 Mar Ecol Prog Ser 26 May 2003 CE: rs TS: jw PP: AL Ecdysteroids in the oceanic copepod Calanus pacificus: variation during molt cycle and change associated with diapause Catherine Lynn Johnson1, 2,* 1Integrative Oceanography Division, Scripps Institution of Oceanography, La Jolla, California 92093-0218, USA 2Present address: Department of Engineering Mathematics, Dalhousie University, PO Box 1000, Halifax, Nova Scotia B3J 2X4, Canada ABSTRACT: Development through the molt cycle in arthropods is characterized both by changes in exoskeleton morphology and by cyclical changes in ecdysteroids, i.e. molting hormones. This study describes for Calanus pacificus ecdysteroid variation during the molt cycle in the fifth copepodid (CV) stage and compares ecdysteroid content of diapausing and active field-collected CVs. In C. pacificus CVs, the pattern of ecdysteroid variation relative to the molt cycle phase is similar to that found in decapod crustacean larvae. Ecdysteroid levels are lowest in the postmolt, the first phase after molting, and then increase to a peak during early premolt. Ecdysteroid levels measured in field- collected diapausing C. pacificus CVs were lower than those in active CVs, as expected based on the predominance of the postmolt phase among diapausing CVs. Ecdysteroid analysis provides a faster, less labor-intensive alternative to jaw-phase analysis for identifying the molt phase of field-collected copepodids, and can provide valuable insights into their life-history status. Measurement of copepod hormonal status in situ may provide a direct means of determining the proximate cues for diapause induction and termination in oceanic copepods. -
Three New Species of Misophrioid Copepods from Oceanic Islands
Three new species of misophrioid copepods from oceanic islands GEOFFREY A. BOXSHALL and THOMAS M. ILIFFEt Department of Zoology, British Museum (Natural History), Cromwell Road, London SW7 5BD, England, ?Department of Marine Biology, Texas A&M University at Galveston, P.O. Box 1675, Galveston, Texas 77553, USA (Accepted 3 December 1989) Three new species of misophrioid copepods are described from anchialine habitats on oceanic islands. Expansophria galapagensis n.sp. is described from two localities on Santa Cruz, Galapagos Islands, Speleophria campaneri n.sp. from Ngamduk Cave, Angaur Island, Palau and S. scottodicarloi n.sp. from Chalk Cave on Bermuda. KEYWORDS:Misophrioid copepods, anchialine caves, oceanic islands. Introduction Half of the described species of the order Misophrioida are known from anchialine habitats on oceanic islands. They have been found in caves on Bermuda (Boxshall and Iliffe, 1986) and in flooded lava tubes and lava pools on the Canary Islands (Boxshall and Iliffe, 1987; Huys, 1988) in the Atlantic, and in caves and sinkholes on islands in the Palau group (Boxshall and Iliffe, 1987) in the Indo-Pacific. During an expedition to the Galapagos islands in 1987 one of us (T.M.I.) collected a large number of misophrioids I on Santa Cruz island. These represent a new species of Expansophria Boxshall and Iliffe, 1987 and are described below. This is the third species of Expansophria to be discovered, the other two being found on Lanzarote in the Canaries and on Ngeruktabel Island, Palau (Boxshall and Iliffe, 1987). Two new species of Speleophria are also described, one from a cave on Angaur island in the Palau archipelago, the other from a cave in Bermuda. -
<I>Calanus Pacificus,</I> a Planktonic
BULLETIN OF MARINE SCIENCE, 43(3): 675--{j94, ]988 VARIABILITY AND POSSIBLE ADAPTIVE SIGNIFICANCE OF DIEL VERTICAL MIGRATION IN CALANUS PACIFICUS, A PLANKTONIC MARINE COPEPOD Bruce W Frost ABSTRACT Adult females of a population of Calanus pacificus inhabiting a temperate fjord, Dabob Bay (Washington), exhibited seasonal and interannual variability in diel vertical migration. This variation was unrelated to food availability, in situ growth rate of females, and thermal stratification of the water column. A model of population growth of C pacificus, utilizing a life table approach founded on current knowledge of relevant physiological processes, was used to predict growth rates of migratory and nonmigratory populations and to test the implications of several alternative hypotheses for the adaptive significance of diel vertical migration. It was found that hypotheses invoking metabolic advantages for diel migrants (i.e., that dieI vertical migration is a foraging strategy optimizing individual growth rate) cannot, even when properly recast in terms of population growth, account for observed migration behavior. Rather, the model suggested a significant causal role for mortality op- erating differentially on migratory and nonmigratory individuals. The observations of mi- gration behavior in Dabob Bay are consistent with results of the model of population growth, which point unambiguously toward predator avoidance as the major selective advantage of dieI vertical migration in C pac!ficus. Mounting circumstantial evidence and theoretical arguments implicate pre- dation as a major driving force for diel vertical migrations of planktonic animals inhabiting lakes and areas of the ocean where advective losses are negligible (Zaret and Suffern, 1976; Wright et al., 1980; Stich and Lampert, 1981; Ohman et aI., 1983; Fancett and Kimmerer, 1985; Gliwicz, 1986a; 1986b; Lampert, 1987). -
Fossil Calibrations for the Arthropod Tree of Life
bioRxiv preprint doi: https://doi.org/10.1101/044859; this version posted June 10, 2016. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY 4.0 International license. FOSSIL CALIBRATIONS FOR THE ARTHROPOD TREE OF LIFE AUTHORS Joanna M. Wolfe1*, Allison C. Daley2,3, David A. Legg3, Gregory D. Edgecombe4 1 Department of Earth, Atmospheric & Planetary Sciences, Massachusetts Institute of Technology, Cambridge, MA 02139, USA 2 Department of Zoology, University of Oxford, South Parks Road, Oxford OX1 3PS, UK 3 Oxford University Museum of Natural History, Parks Road, Oxford OX1 3PZ, UK 4 Department of Earth Sciences, The Natural History Museum, Cromwell Road, London SW7 5BD, UK *Corresponding author: [email protected] ABSTRACT Fossil age data and molecular sequences are increasingly combined to establish a timescale for the Tree of Life. Arthropods, as the most species-rich and morphologically disparate animal phylum, have received substantial attention, particularly with regard to questions such as the timing of habitat shifts (e.g. terrestrialisation), genome evolution (e.g. gene family duplication and functional evolution), origins of novel characters and behaviours (e.g. wings and flight, venom, silk), biogeography, rate of diversification (e.g. Cambrian explosion, insect coevolution with angiosperms, evolution of crab body plans), and the evolution of arthropod microbiomes. We present herein a series of rigorously vetted calibration fossils for arthropod evolutionary history, taking into account recently published guidelines for best practice in fossil calibration. -
A Synthesis Tree of the Copepoda: Integrating Phylogenetic and Taxonomic Data Reveals Multiple Origins of Parasitism
A synthesis tree of the Copepoda: integrating phylogenetic and taxonomic data reveals multiple origins of parasitism James P. Bernot1,2, Geoffrey A. Boxshall3 and Keith A. Crandall1,2 1 Department of Invertebrate Zoology, Smithsonian National Museum of Natural History, Washington, DC, United States of America 2 Computational Biology Institute, Milken Institute School of Public Health, George Washington University, Washington, DC, United States of America 3 Department of Life Sciences, Natural History Museum, London, United Kingdom ABSTRACT The Copepoda is a clade of pancrustaceans containing 14,485 species that are extremely varied in their morphology and lifestyle. Not only do copepods dominate marine plank- ton and sediment communities and make up a sizeable component of the freshwater plankton, but over 6,000 species are symbiotically associated with every major phylum of marine metazoans, mostly as parasites. Unfortunately, our understanding of copepod evolutionary relationships is relatively limited in part because of their extremely divergent morphology, sparse taxon sampling in molecular phylogenetic analyses, a reliance on only a handful of molecular markers, and little taxonomic overlap between phylogenetic studies. Here, a synthesis tree method is used to integrate published phylogenies into a more comprehensive tree of copepods by leveraging phylogenetic and taxonomic data. A literature review in this study finds fewer than 500 species of copepods have been sampled in molecular phylogenetic studies. Using the Open Tree of Life platform, those taxa that have been sampled in previous phylogenetic studies are grafted together and combined with the underlying copepod taxonomic hierarchy from the Open Tree of Life Taxonomy to make a synthesis phylogeny of all copepod species. -
(Gulf Watch Alaska) Final Report the Seward Line: Marine Ecosystem
Exxon Valdez Oil Spill Long-Term Monitoring Program (Gulf Watch Alaska) Final Report The Seward Line: Marine Ecosystem monitoring in the Northern Gulf of Alaska Exxon Valdez Oil Spill Trustee Council Project 16120114-J Final Report Russell R Hopcroft Seth Danielson Institute of Marine Science University of Alaska Fairbanks 905 N. Koyukuk Dr. Fairbanks, AK 99775-7220 Suzanne Strom Shannon Point Marine Center Western Washington University 1900 Shannon Point Road, Anacortes, WA 98221 Kathy Kuletz U.S. Fish and Wildlife Service 1011 East Tudor Road Anchorage, AK 99503 July 2018 The Exxon Valdez Oil Spill Trustee Council administers all programs and activities free from discrimination based on race, color, national origin, age, sex, religion, marital status, pregnancy, parenthood, or disability. The Council administers all programs and activities in compliance with Title VI of the Civil Rights Act of 1964, Section 504 of the Rehabilitation Act of 1973, Title II of the Americans with Disabilities Action of 1990, the Age Discrimination Act of 1975, and Title IX of the Education Amendments of 1972. If you believe you have been discriminated against in any program, activity, or facility, or if you desire further information, please write to: EVOS Trustee Council, 4230 University Dr., Ste. 220, Anchorage, Alaska 99508-4650, or [email protected], or O.E.O., U.S. Department of the Interior, Washington, D.C. 20240. Exxon Valdez Oil Spill Long-Term Monitoring Program (Gulf Watch Alaska) Final Report The Seward Line: Marine Ecosystem monitoring in the Northern Gulf of Alaska Exxon Valdez Oil Spill Trustee Council Project 16120114-J Final Report Russell R Hopcroft Seth L. -
Natural Diets of Zooplankton Off Southern California
MARINE ECOLOGY - PROGRESS SERIES Vol. 49: 231-241, 1988 Published November 30 Mar. Ecol. Prog. Ser. Natural diets of zooplankton off southern California ' Nova University Oceanographic Center, 8000 North Ocean Drive, Dania, Florida 33004, USA * University of Southern California Marine Laboratory, 820 South Seaside Avenue, Terminal Island, California 90731, USA "racor Applied Sciences, 9150 Chesapeake Drive, San Diego, California 92123, USA ABSTRACT: Plant and animal carotenoid pigments were isolated from the guts of the copepods Calanus pacificus and Clausocalanus sp, and the cladocerans Evadne spp. by high performance Liquid chromatography. Measured carotenoid concentrations were converted to eshmates of class-specific phytoplankton biomass and total microzooplankton biomass In the zooplankton diets. Different pig- ments were present in the guts at dfferent times of day and night and the tllnmg of peak gut fullness var~edbetween species. In C. pacificus, pigment concentrat~onswere highest during the period from evening twilight to midnight. Evadne spp. exhibited a midnight peak In gut pigmentation. Clausocalanus sp. contained elevated levels of pigments between midnight and noon. The gut contents of C. pacificus and Evadne spp. were dominated by animal carbon when phytoplankton biomass and productivity were relatively low, and by algal carbon when phytoplankton biomass and productivity were high. Clausocalanus sp. did not follow this pattern. Our observations are consistent with the hypothesis that carnivory may represent an important mode of feeding among small zooplankton and, further, that the diets of some species of zooplankton vary in response to quantitative and qualitative attributes of the food environment. INTRODUCTION developn~entof A. tonsa when its diet consisted of a mixture of diatoms and detritus than when either food Many small, planktonic crustaceans are thought to was provided alone.