Bezerromycetales and Wiesneriomycetales Ord. Nov. (Class Dothideomycetes), with Two Novel Genera to Accommodate Endophytic Fungi from Brazilian Cactus
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Mycosphere Notes 225–274: Types and Other Specimens of Some Genera of Ascomycota
Mycosphere 9(4): 647–754 (2018) www.mycosphere.org ISSN 2077 7019 Article Doi 10.5943/mycosphere/9/4/3 Copyright © Guizhou Academy of Agricultural Sciences Mycosphere Notes 225–274: types and other specimens of some genera of Ascomycota Doilom M1,2,3, Hyde KD2,3,6, Phookamsak R1,2,3, Dai DQ4,, Tang LZ4,14, Hongsanan S5, Chomnunti P6, Boonmee S6, Dayarathne MC6, Li WJ6, Thambugala KM6, Perera RH 6, Daranagama DA6,13, Norphanphoun C6, Konta S6, Dong W6,7, Ertz D8,9, Phillips AJL10, McKenzie EHC11, Vinit K6,7, Ariyawansa HA12, Jones EBG7, Mortimer PE2, Xu JC2,3, Promputtha I1 1 Department of Biology, Faculty of Science, Chiang Mai University, Chiang Mai 50200, Thailand 2 Key Laboratory for Plant Diversity and Biogeography of East Asia, Kunming Institute of Botany, Chinese Academy of Sciences, 132 Lanhei Road, Kunming 650201, China 3 World Agro Forestry Centre, East and Central Asia, 132 Lanhei Road, Kunming 650201, Yunnan Province, People’s Republic of China 4 Center for Yunnan Plateau Biological Resources Protection and Utilization, College of Biological Resource and Food Engineering, Qujing Normal University, Qujing, Yunnan 655011, China 5 Shenzhen Key Laboratory of Microbial Genetic Engineering, College of Life Sciences and Oceanography, Shenzhen University, Shenzhen 518060, China 6 Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai 57100, Thailand 7 Department of Entomology and Plant Pathology, Faculty of Agriculture, Chiang Mai University, Chiang Mai 50200, Thailand 8 Department Research (BT), Botanic Garden Meise, Nieuwelaan 38, BE-1860 Meise, Belgium 9 Direction Générale de l'Enseignement non obligatoire et de la Recherche scientifique, Fédération Wallonie-Bruxelles, Rue A. -
Wood Staining Fungi Revealed Taxonomic Novelties in Pezizomycotina: New Order Superstratomycetales and New Species Cyanodermella Oleoligni
available online at www.studiesinmycology.org STUDIES IN MYCOLOGY 85: 107–124. Wood staining fungi revealed taxonomic novelties in Pezizomycotina: New order Superstratomycetales and new species Cyanodermella oleoligni E.J. van Nieuwenhuijzen1, J.M. Miadlikowska2*, J.A.M.P. Houbraken1*, O.C.G. Adan3, F.M. Lutzoni2, and R.A. Samson1 1CBS-KNAW Fungal Biodiversity Centre, Uppsalalaan 8, 3584 CT Utrecht, The Netherlands; 2Department of Biology, Duke University, Durham, NC 27708, USA; 3Department of Applied Physics, Eindhoven University of Technology, P.O. Box 513, 5600 MB Eindhoven, The Netherlands *Correspondence: J.M. Miadlikowska, [email protected]; J.A.M.P. Houbraken, [email protected] Abstract: A culture-based survey of staining fungi on oil-treated timber after outdoor exposure in Australia and the Netherlands uncovered new taxa in Pezizomycotina. Their taxonomic novelty was confirmed by phylogenetic analyses of multi-locus sequences (ITS, nrSSU, nrLSU, mitSSU, RPB1, RPB2, and EF-1α) using multiple reference data sets. These previously unknown taxa are recognised as part of a new order (Superstratomycetales) potentially closely related to Trypetheliales (Dothideomycetes), and as a new species of Cyanodermella, C. oleoligni in Stictidaceae (Ostropales) part of the mostly lichenised class Lecanoromycetes. Within Superstratomycetales a single genus named Superstratomyces with three putative species: S. flavomucosus, S. atroviridis, and S. albomucosus are formally described. Monophyly of each circumscribed Superstratomyces species was highly supported and the intraspecific genetic variation was substantially lower than interspecific differences detected among species based on the ITS, nrLSU, and EF-1α loci. Ribosomal loci for all members of Superstratomyces were noticeably different from all fungal sequences available in GenBank. -
Occurrence of Canker and Wood Rot Pathogens on Stone Fruit Propagation Material and Nursery Stone Fruit Trees
OCCURRENCE OF CANKER AND WOOD ROT PATHOGENS ON STONE FRUIT PROPAGATION MATERIAL AND NURSERY STONE FRUIT TREES by RHONA VAN DER MERWE Thesis presented in partial fulfilment of the requirements for the degree of Master of Science in the Faculty of AgriSciences at the University of Stellenbosch Supervisor: Prof L Mostert Co-supervisor: Prof F Halleen April 2019 Stellenbosch University https://scholar.sun.ac.za DECLARATION By submitting this thesis/dissertation electronically, I declare that the entirety of the work contained therein is my own, original work, that I am the sole author thereof (save to the extent explicitly otherwise stated), that reproduction and publication thereof by Stellenbosch University will not infringe any third party rights and that I have not previously in its entirety or in part submitted it for obtaining any qualification. Date: 14 February 2019 Sign: Rhona van der Merwe Copyright © 2019 Stellenbosch University All rights reserved II Stellenbosch University https://scholar.sun.ac.za SUMMARY The phytosanitary status of stone fruit propagation material and nursery trees in South Africa are not known. Canker and wood rot pathogens can be present in visibly clean material. Due to stress and other improper cultural practices, symptoms will be expressed and cankers, dieback of parts of the tree and possible death of the trees can be seen. Therefore, the aim of this study was to identify the fungal canker and wood rot pathogens present in propagation material and nursery stone fruit trees. Green scion shoots were collected from three plum and one nectarine cultivars and dormant scion shoots were collected from three plum cultivars. -
New Records of <I>Loculoascomycetes</I> From
MYCOTAXON Volume 111, pp. 19–30 January–March 2010 New records of Loculoascomycetes from natural protected areas in Sonora, Mexico Fátima Méndez-Mayboca1, Julia Checa2*, Martín Esqueda1 & Santiago Chacón3 * [email protected] 1Centro de Investigación en Alimentación y Desarrollo, A.C. Apartado Postal 1735, Hermosillo, Sonora 83304, México 2Dpto. de Biología Vegetal, Facultad de Biología, Universidad de Alcalá Alcalá de Henares, Madrid 28871, Spain 3Instituto de Ecología, A.C. Apartado Postal 63, Xalapa, Veracruz 91000, México Abstract — Thirty collections of Loculoascomycetes from the Ajos-Bavispe National Forest Reserve and Wildlife Refuge, the Pinacate and Great Altar Desert Biosphere Reserve, and the Sierra of Alamos-Rio Cuchujaqui Biosphere Reserve, in Sonora, Mexico were studied. Ten new records for the Mexican mycobiota are presented: Capronia montana, Chaetoplea crossata, Didymosphaeria futilis, Glonium abbreviatum, Hysterographium mori, Montagnula infernalis, Patellaria atrata, Rhytidhysteron rufulum, Thyridaria macrostomoides, and Valsaria rubricosa. Photographs of macro- and microscopic characters are given for some species. Key words: Chaetothyriales, Hysteriales, Melanommatales, Patellariales, Pleosporales Introduction The term Loculoascomycetes is used for ascomycetes with bitunicate asci and septate ascospores (Kirk et al. 2008). There is some controversy over the taxonomy of the genera in this group, e.g., Valsaria, because authors such as Dennis (1978) have placed them in the Loculoascomycetes owing to their bitunicate asci while others, such as Barr (1990a), have included them in Pyrenomycetes arguing the presence of unitunicate asci. Boehm et al. (2009) studied four nuclear genes in different species of Loculoascomycetes and have proposed changes to the current taxonomy, e.g., Rhytidhysteron rufulum which was previously included in order Patellariales has been tentatively moved to the Hysteriales. -
Fungi Detected in Trunk of Stone Fruits in the Czech Republic
PecenkaJ et al.:Layout 1 5/16/17 12:00 PM Page 1 AGRáRTUDOMáNyI KözLEMéNyEK , 2017/72. Fungi detected in trunk of stone fruits in the Czech Republic 1Jakub Pečenka – 1Eliška Peňázová – 2Dorota Tekielska – 3Ivo Ondrášek – 3Tomáš Nečas – 1Aleš Eichmeier 1Mendel University Faculty of Hoticulture, Department of Genetics, Lednice, Czech Republic 2University of Agriculture, Faculty of Biotechnology and Horticulture, Department of Plant Protection, Krakow, Poland 3Mendel University Faculty of Hoticulture, Department of Fruit Growing, Lednice, Czech Republic [email protected] SUMMARY This study was focused on detection of the spectrum of fungi in the wood of stone fruits using molecular genetic methods. Samples were obtained from apricots, plums and sweet cherry trees from region of Moravia, one sample was obtained from Myjava (Slovakia). Segments of symptomatic wood were obtained from dying stone fruit trees with very significant symptoms. This study describes detection of the fungi in the wood of 11 trees in general in 5 localities. The cultivation of the fungi from symptomatic wood and sequencing of ITS was carried out. Eleven fungal genera were determined in the stone fruits wood, particularly Irpex lacteus, Fomes fomentarius, Neofabraea corticola, Calosphaeria pulchella, Cytospora leucostoma, Phellinus tuberculosus, Stereum hirsutum, Collophora sp., Pithomyces chartarum, Aureobasidium pullulans, Fusarium sp. The results of this study demonstrate that the reason of declining of stone fruit trees in Moravia is caused probably by trunk pathogens. Keywords: stone fruit, fungal trunk pathogens, detection, ITS, Calosphaeria, Cytospora, Collophora genera INTRODUCTION are going to be old. On the other hand the production areas of plums increased almost five times (Buchrová Diseases of fruit trees have a negative effect on 2015). -
Wood Staining Fungi Revealed Taxonomic Novelties in Pezizomycotina: New Order Superstratomycetales and New Species Cyanodermella Oleoligni
Wood staining fungi revealed taxonomic novelties in Pezizomycotina: new order Superstratomycetales and new species Cyanodermella oleoligni Citation for published version (APA): van Nieuwenhuijzen, E. J., Miadlikowska, J. M., Houbraken, J. A. M. P., Adan, O. C. G., Lutzoni, F. M., & Samson, R. A. (2016). Wood staining fungi revealed taxonomic novelties in Pezizomycotina: new order Superstratomycetales and new species Cyanodermella oleoligni. Studies in Mycology, 85, 107-124. https://doi.org/10.1016/j.simyco.2016.11.008 Document license: CC BY-NC-ND DOI: 10.1016/j.simyco.2016.11.008 Document status and date: Published: 01/09/2016 Document Version: Publisher’s PDF, also known as Version of Record (includes final page, issue and volume numbers) Please check the document version of this publication: • A submitted manuscript is the version of the article upon submission and before peer-review. There can be important differences between the submitted version and the official published version of record. People interested in the research are advised to contact the author for the final version of the publication, or visit the DOI to the publisher's website. • The final author version and the galley proof are versions of the publication after peer review. • The final published version features the final layout of the paper including the volume, issue and page numbers. Link to publication General rights Copyright and moral rights for the publications made accessible in the public portal are retained by the authors and/or other copyright owners and it is a condition of accessing publications that users recognise and abide by the legal requirements associated with these rights. -
<I>Thyronectria
Persoonia 33, 2014: 182–211 www.ingentaconnect.com/content/nhn/pimj RESEARCH ARTICLE http://dx.doi.org/10.3767/003158514X685211 Persistent hamathecial threads in the Nectriaceae, Hypocreales: Thyronectria revisited and re-instated W.M. Jaklitsch1, H. Voglmayr1,2 Key words Abstract Based on type studies and freshly collected material we here re-instate the genus Thyronectria (Nec- triaceae, Hypocreales). Species of this genus were recently for the most part classified in the genera Pleonectria act (Nectriaceae) or Mattirolia (Thyridiaceae), because Thyronectria and other genera had been identified as members Ascomycota of the Thyridiaceae due to the presence of paraphyses. Molecular phylogenies based on several markers (act, ITS, Hypocreales LSU rDNA, rpb1, rpb2, tef1, tub) revealed that the Nectriaceae contain members whose ascomata are characterised Mattirolia by long, more or less persistent, apical paraphyses. All of these belong to a single genus, Thyronectria, which thus Nectriaceae has representatives with hyaline, rosy, green or even dark brown and sometimes distoseptate ascospores. The new species type species of Thyronectria, T. rhodochlora, syn. T. patavina, syn. T. pyrrhochlora is re-described and illustrated. Pleonectria Within the Nectriaceae persistent, apical paraphyses are common in Thyronectria and rarely also occur in Nectria. pyrenomycetes The genus Mattirolia is revised and merged with Thyronectria and also Thyronectroidea is regarded as a synonym rpb1 of Thyronectria. The three new species T. asturiensis, T. caudata and T. obscura are added to the genus. Species rpb2 recently described in Pleonectria as well as some species of Mattirolia are combined in the genus, and a key to tef1 Thyronectria is provided. Five species are epitypified. -
Microfungi Associated with Camellia Sinensis: a Case Study of Leaf and Shoot Necrosis on Tea in Fujian, China
Mycosphere 12(1): 430–518 (2021) www.mycosphere.org ISSN 2077 7019 Article Doi 10.5943/mycosphere/12/1/6 Microfungi associated with Camellia sinensis: A case study of leaf and shoot necrosis on Tea in Fujian, China Manawasinghe IS1,2,4, Jayawardena RS2, Li HL3, Zhou YY1, Zhang W1, Phillips AJL5, Wanasinghe DN6, Dissanayake AJ7, Li XH1, Li YH1, Hyde KD2,4 and Yan JY1* 1Institute of Plant and Environment Protection, Beijing Academy of Agriculture and Forestry Sciences, Beijing 100097, People’s Republic of China 2Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai 57100, Tha iland 3 Tea Research Institute, Fujian Academy of Agricultural Sciences, Fu’an 355015, People’s Republic of China 4Innovative Institute for Plant Health, Zhongkai University of Agriculture and Engineering, Guangzhou 510225, People’s Republic of China 5Universidade de Lisboa, Faculdade de Ciências, Biosystems and Integrative Sciences Institute (BioISI), Campo Grande, 1749–016 Lisbon, Portugal 6 CAS, Key Laboratory for Plant Biodiversity and Biogeography of East Asia (KLPB), Kunming Institute of Botany, Chinese Academy of Science, Kunming 650201, Yunnan, People’s Republic of China 7School of Life Science and Technology, University of Electronic Science and Technology of China, Chengdu 611731, People’s Republic of China Manawasinghe IS, Jayawardena RS, Li HL, Zhou YY, Zhang W, Phillips AJL, Wanasinghe DN, Dissanayake AJ, Li XH, Li YH, Hyde KD, Yan JY 2021 – Microfungi associated with Camellia sinensis: A case study of leaf and shoot necrosis on Tea in Fujian, China. Mycosphere 12(1), 430– 518, Doi 10.5943/mycosphere/12/1/6 Abstract Camellia sinensis, commonly known as tea, is one of the most economically important crops in China. -
Plant Health and Food Safety Volume 58 Volume
ISSN 0031 - 9465 PHYTOPATHOLOGIA MEDITERRANEA PHYTOPATHOLOGIA PHYTOPATHOLOGIA MEDITERRANEAVolume 58 • No. 2 • August 2019 Plant health and food safety Volume 58 • Number 2 • Iscritto al Tribunale di Firenze con il n° 4923del 5-1-2000 - Poste Italiane Spa Spedizione in Abbonamento Postale 70% DCB FIRENZE di Firenze Iscritto al Tribunale August 2019 Pages 219-449 FIRENZE The international journal of the UNIVERSITY Mediterranean Phytopathological Union PRESS PHYTOPATHOLOGIA MEDITERRANEA Plant health and food safety Te international journal edited by the Mediterranean Phytopathological Union founded by A. Ciccarone and G. Goidànich Phytopathologia Mediterranea is an international journal edited by the Mediterranean Phytopathological Union The journal’s mission is the promotion of plant health for Mediterranean crops, climate and regions, safe food production, and the transfer of knowledge on diseases and their sustainable management. The journal deals with all areas of plant pathology, including epidemiology, disease control, biochemical and physiological aspects, and utilization of molecular technologies. All types of plant pathogens are covered, including fungi, nematodes, protozoa, bacteria, phytoplasmas, viruses, and viroids. Papers on mycotoxins, biological and integrated management of plant diseases, and the use of natural substances in disease and weed control are also strongly encouraged. The journal focuses on pathology of Mediterranean crops grown throughout the world. The journal includes three issues each year, publishing Reviews, -
The Mycobiome of Symptomatic Wood of Prunus Trees in Germany
The mycobiome of symptomatic wood of Prunus trees in Germany Dissertation zur Erlangung des Doktorgrades der Naturwissenschaften (Dr. rer. nat.) Naturwissenschaftliche Fakultät I – Biowissenschaften – der Martin-Luther-Universität Halle-Wittenberg vorgelegt von Herrn Steffen Bien Geb. am 29.07.1985 in Berlin Copyright notice Chapters 2 to 4 have been published in international journals. Only the publishers and the authors have the right for publishing and using the presented data. Any re-use of the presented data requires permissions from the publishers and the authors. Content III Content Summary .................................................................................................................. IV Zusammenfassung .................................................................................................. VI Abbreviations ......................................................................................................... VIII 1 General introduction ............................................................................................. 1 1.1 Importance of fungal diseases of wood and the knowledge about the associated fungal diversity ...................................................................................... 1 1.2 Host-fungus interactions in wood and wood diseases ....................................... 2 1.3 The genus Prunus ............................................................................................. 4 1.4 Diseases and fungal communities of Prunus wood .......................................... -
Multi-Locus Phylogeny of Pleosporales: a Taxonomic, Ecological and Evolutionary Re-Evaluation
available online at www.studiesinmycology.org StudieS in Mycology 64: 85–102. 2009. doi:10.3114/sim.2009.64.04 Multi-locus phylogeny of Pleosporales: a taxonomic, ecological and evolutionary re-evaluation Y. Zhang1, C.L. Schoch2, J. Fournier3, P.W. Crous4, J. de Gruyter4, 5, J.H.C. Woudenberg4, K. Hirayama6, K. Tanaka6, S.B. Pointing1, J.W. Spatafora7 and K.D. Hyde8, 9* 1Division of Microbiology, School of Biological Sciences, The University of Hong Kong, Pokfulam Road, Hong Kong SAR, P.R. China; 2National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, 45 Center Drive, MSC 6510, Bethesda, Maryland 20892-6510, U.S.A.; 3Las Muros, Rimont, Ariège, F 09420, France; 4CBS-KNAW Fungal Biodiversity Centre, P.O. Box 85167, 3508 AD, Utrecht, The Netherlands; 5Plant Protection Service, P.O. Box 9102, 6700 HC Wageningen, The Netherlands; 6Faculty of Agriculture & Life Sciences, Hirosaki University, Bunkyo-cho 3, Hirosaki, Aomori 036-8561, Japan; 7Department of Botany and Plant Pathology, Oregon State University, Corvallis, Oregon 93133, U.S.A.; 8School of Science, Mae Fah Luang University, Tasud, Muang, Chiang Rai 57100, Thailand; 9International Fungal Research & Development Centre, The Research Institute of Resource Insects, Chinese Academy of Forestry, Kunming, Yunnan, P.R. China 650034 *Correspondence: Kevin D. Hyde, [email protected] Abstract: Five loci, nucSSU, nucLSU rDNA, TEF1, RPB1 and RPB2, are used for analysing 129 pleosporalean taxa representing 59 genera and 15 families in the current classification ofPleosporales . The suborder Pleosporineae is emended to include four families, viz. Didymellaceae, Leptosphaeriaceae, Phaeosphaeriaceae and Pleosporaceae. In addition, two new families are introduced, i.e. -
AJOM 2 1 20.Pdf
Asian Journal of Mycology 2(1): 298–305 (2019) ISSN 2651-1339 www.asianjournalofmycology.org Article Doi 10.5943/ajom/2/1/20 https://fungalgenera.org/: a comprehensive database providing web- based information for all fungal genera Monkai J1, McKenzie EHC2, Phillips AJL3, Hongsanan S4, Pem D1,5, Liu JK6, Chethana KWT1,7*, Tian Q1, Ekanayaka AH1, Lestari AS1,8, Zeng M1,9, Zhao Q9, Norphanphoun C1, Abeywikrama PD1,10, Maharachchikumbura SSN6, Jayawardena RS1,7, Chen YJ1, Zhao R-L11,12, He M-Q11, Raspé O1,7, Kirk PM13, Gentekaki E7, and Hyde KD1,9 1 Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai, Thailand 2 Landcare Research-Manaaki Whenua, Private Bag 92170, Auckland, New Zealand 3 Faculdade de Ciências, Biosystems and Integrative Sciences Institute (BioISI), Universidade de Lisboa, Campo Grande, 1749-016 Lisbon, Portugal 4 College of Life Science and Oceanography, Shenzhen University, 1068, Nanhai Avenue, Nanshan, Shenzhen 518055, P.R. China 5 Department of Biology, Faculty of Science, Chiang Mai University, Chiang Mai 50200, Thailand 6 School of Life Science and Technology, University of Electronic Science and Technology of China, Chengdu 611731, P.R. China 7 School of Science, Mae Fah Luang University, Chiang Rai, Thailand 8 Research Center for Biomaterials, Indonesian Institute of Sciences (LIPI), JL. Raya Bogor km.46, Cibinong, Bogor, Jawa Barat, Indonesia 9 Key Laboratory for Plant Diversity and Biogeography of East Asia, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming 650201, P.R. China 10 Institute of Plant and Environment Protection, Beijing Academy of Agriculture and Forestry Sciences, No.9 of Shuguanghuayuanzhonglu, Haidian District, Beijing 100097, P.R.